RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TIMM17AQ99595 171 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 SMCO4Q9NRQ5 59 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 PLAC8Q9NZF1 115 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 TRAPPC1Q9Y5R8 145 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 A0A087WZ39 114 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 A0A096LNI7 61 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 NDUFA1O15239 70 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 UBE2D1P51668 147 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 ERASQ7Z444 233 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 LINC01561Q8N1V8 128 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 STPG4Q8N801 248 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 C7orf33Q8WU49 177 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 SCGB3A1Q96QR1 104 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 DNAH8Q96JB1 4490 aa4.67□□□□□ -1.66
CPSF7-224ENST00000544990 ABCA13Q86UQ4 5058 aa4.66□□□□□ -1.66
CPSF7-224ENST00000544990 LINC01546A6NGU7 62 aa4.66□□□□□ -1.66
CPSF7-224ENST00000544990 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
CPSF7-224ENST00000544990 HERVK_113P63121 156 aa4.66□□□□□ -1.66
CPSF7-224ENST00000544990 GAGE2BQ13066 116 aa4.66□□□□□ -1.66
CPSF7-224ENST00000544990 LINC00173Q6ZV60 143 aa4.66□□□□□ -1.66
CPSF7-224ENST00000544990 FAM19A3Q7Z5A8 133 aa4.66□□□□□ -1.66
CPSF7-224ENST00000544990 PRR26Q8N8Z3 221 aa4.66□□□□□ -1.66
CPSF7-224ENST00000544990 GEMIN7Q9H840 131 aaKnown RBP4.66□□□□□ -1.66
CPSF7-224ENST00000544990 MRPL35Q9NZE8 188 aaKnown RBP4.66□□□□□ -1.66
CPSF7-224ENST00000544990 LINC00614P0C842 121 aa4.65□□□□□ -1.67
CPSF7-224ENST00000544990 VPREB1P12018 145 aa4.65□□□□□ -1.67
CPSF7-224ENST00000544990 RAB5BP61020 215 aa4.65□□□□□ -1.67
CPSF7-224ENST00000544990 RPL18AQ02543 176 aaKnown RBP4.65□□□□□ -1.67
CPSF7-224ENST00000544990 ZC2HC1BQ5TFG8 222 aa4.65□□□□□ -1.67
CPSF7-224ENST00000544990 PACRGQ96M98 296 aaPredicted RBP4.65□□□□□ -1.67
CPSF7-224ENST00000544990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.64□□□□□ -1.67
CPSF7-224ENST00000544990 KRTAP10-4P60372 401 aaPredicted RBP4.64□□□□□ -1.67
CPSF7-224ENST00000544990 UNQ6190/PRO20217Q6UXQ8 127 aa4.64□□□□□ -1.67
CPSF7-224ENST00000544990 C18orf32Q8TCD1 76 aa4.64□□□□□ -1.67
CPSF7-224ENST00000544990 FAT1Q14517 4588 aa4.63□□□□□ -1.67
CPSF7-224ENST00000544990 A0A0J9YXV3 536 aa4.63□□□□□ -1.67
CPSF7-224ENST00000544990 TRBV30A0A0K0K1B3 111 aa4.63□□□□□ -1.67
CPSF7-224ENST00000544990 TLX1NBP0CAT3 122 aa4.63□□□□□ -1.67
CPSF7-224ENST00000544990 CKS1BP61024 79 aa4.63□□□□□ -1.67
CPSF7-224ENST00000544990 KIAA0087Q14695 138 aa4.63□□□□□ -1.67
CPSF7-224ENST00000544990 PMVKQ15126 192 aa4.63□□□□□ -1.67
CPSF7-224ENST00000544990 C6orf226Q5I0X4 101 aa4.63□□□□□ -1.67
CPSF7-224ENST00000544990 TOMM7Q9P0U1 55 aa4.63□□□□□ -1.67
CPSF7-224ENST00000544990 FLG2Q5D862 2391 aaPredicted RBP4.63□□□□□ -1.67
CPSF7-224ENST00000544990 SRRM2Q9UQ35 2752 aaKnown RBP4.63□□□□□ -1.67
CPSF7-224ENST00000544990 DMBT1Q9UGM3 2413 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-224ENST00000544990 TINCRA0A1B0GVN0 87 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-224ENST00000544990 OXTP01178 125 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 HBDP02042 147 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 IGKV2-30P06310 120 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 Q8IZM0 81 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 LINC00469Q8N7U9 141 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 CST9LQ9H4G1 147 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 C6orf48Q9UBA6 75 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 CDKN2A-AS1Q9UH64 79 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 VPS13BQ7Z7G8 4022 aa4.62□□□□□ -1.67
CPSF7-224ENST00000544990 ATP5LO75964 103 aa4.61□□□□□ -1.67
CPSF7-224ENST00000544990 CXCL5P42830 114 aa4.61□□□□□ -1.67
CPSF7-224ENST00000544990 NDUFA6P56556 154 aa4.61□□□□□ -1.67
CPSF7-224ENST00000544990 GAGE2EQ4V326 116 aa4.61□□□□□ -1.67
CPSF7-224ENST00000544990 C9orf116Q5BN46 136 aaPredicted RBP4.61□□□□□ -1.67
CPSF7-224ENST00000544990 PDZD11Q5EBL8 140 aa4.61□□□□□ -1.67
CPSF7-224ENST00000544990 C2orf82Q6UX34 121 aa4.61□□□□□ -1.67
CPSF7-224ENST00000544990 SLC7A5P1Q8MH63 180 aa4.61□□□□□ -1.67
CPSF7-224ENST00000544990 YPEL4Q96NS1 127 aa4.61□□□□□ -1.67
CPSF7-224ENST00000544990 GAGE2DQ9UEU5 116 aa4.61□□□□□ -1.67
CPSF7-224ENST00000544990 IGLV5-37A0A075B6J1 123 aa4.6□□□□□ -1.67
CPSF7-224ENST00000544990 IGLV5-45A0A087WSX0 123 aa4.6□□□□□ -1.67
CPSF7-224ENST00000544990 A0A1W2PNN7 141 aa4.6□□□□□ -1.67
CPSF7-224ENST00000544990 NDUFC2-KCTD14E9PQ53 114 aa4.6□□□□□ -1.67
CPSF7-224ENST00000544990 H3BRM9 83 aa4.6□□□□□ -1.67
CPSF7-224ENST00000544990 Q6ZRP5 223 aa4.6□□□□□ -1.67
CPSF7-224ENST00000544990 CBLN2Q8IUK8 224 aa4.6□□□□□ -1.67
CPSF7-224ENST00000544990 CHCHD1Q96BP2 118 aaKnown RBP4.6□□□□□ -1.67
CPSF7-224ENST00000544990 A0A096LNJ9 63 aa4.59□□□□□ -1.67
CPSF7-224ENST00000544990 SMIM1B2RUZ4 78 aa4.59□□□□□ -1.67
CPSF7-224ENST00000544990 F8VRH5 84 aa4.59□□□□□ -1.67
CPSF7-224ENST00000544990 HNRNPA3P51991 378 aaKnown RBP4.59□□□□□ -1.67
CPSF7-224ENST00000544990 SNRPEP62304 92 aaKnown RBP4.59□□□□□ -1.67
CPSF7-224ENST00000544990 PRR3P79522 188 aaKnown RBP4.59□□□□□ -1.67
CPSF7-224ENST00000544990 PMCHL1Q16048 86 aa4.59□□□□□ -1.67
CPSF7-224ENST00000544990 COX7B2Q8TF08 81 aa4.59□□□□□ -1.67
CPSF7-224ENST00000544990 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
CPSF7-224ENST00000544990 SPINK8P0C7L1 97 aa4.58□□□□□ -1.68
CPSF7-224ENST00000544990 IGLC3P0DOY3 106 aa4.58□□□□□ -1.68
CPSF7-224ENST00000544990 BAGE3Q86Y29 109 aa4.58□□□□□ -1.68
CPSF7-224ENST00000544990 ATP6V1G1O75348 118 aa4.57□□□□□ -1.68
CPSF7-224ENST00000544990 HSBP1O75506 76 aa4.57□□□□□ -1.68
CPSF7-224ENST00000544990 TRGC2P03986 189 aa4.57□□□□□ -1.68
CPSF7-224ENST00000544990 UBE2V1Q13404 147 aa4.57□□□□□ -1.68
CPSF7-224ENST00000544990 GAGE2AQ6NT46 116 aa4.57□□□□□ -1.68
CPSF7-224ENST00000544990 SPINK6Q6UWN8 80 aa4.57□□□□□ -1.68
CPSF7-224ENST00000544990 PHF5AQ7RTV0 110 aaKnown RBP4.57□□□□□ -1.68
CPSF7-224ENST00000544990 FAM19A5Q7Z5A7 132 aaPredicted RBP4.57□□□□□ -1.68
CPSF7-224ENST00000544990 HERC1Q15751 4861 aa4.57□□□□□ -1.68
CPSF7-224ENST00000544990 FAM168BA1KXE4 195 aa4.56□□□□□ -1.68
CPSF7-224ENST00000544990 TMEM170BQ5T4T1 132 aa4.56□□□□□ -1.68
CPSF7-224ENST00000544990 IFI27L1Q96BM0 104 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms