RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 OR10D4PQ8NGN7 298 aa7.71□□□□□ -1.18
USP28-212ENST00000544750 C18orf32Q8TCD1 76 aa7.71□□□□□ -1.18
USP28-212ENST00000544750 ORAOV1Q8WV07 137 aa7.71□□□□□ -1.18
USP28-212ENST00000544750 C2orf48Q96LS8 159 aa7.71□□□□□ -1.18
USP28-212ENST00000544750 A0A096LNJ9 63 aa7.7□□□□□ -1.18
USP28-212ENST00000544750 KIAA0087Q14695 138 aa7.7□□□□□ -1.18
USP28-212ENST00000544750 PRR4Q16378 134 aa7.7□□□□□ -1.18
USP28-212ENST00000544750 ERASQ7Z444 233 aa7.7□□□□□ -1.18
USP28-212ENST00000544750 CBLN2Q8IUK8 224 aa7.7□□□□□ -1.18
USP28-212ENST00000544750 C2orf88Q9BSF0 95 aa7.7□□□□□ -1.18
USP28-212ENST00000544750 VCX2Q9H322 139 aa7.7□□□□□ -1.18
USP28-212ENST00000544750 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
USP28-212ENST00000544750 G0S2P27469 103 aa7.69□□□□□ -1.18
USP28-212ENST00000544750 FA2HQ7L5A8 372 aa7.69□□□□□ -1.18
USP28-212ENST00000544750 CAMK2N2Q96S95 79 aa7.69□□□□□ -1.18
USP28-212ENST00000544750 C10orf25Q5T742 122 aa7.68□□□□□ -1.18
USP28-212ENST00000544750 SCGB3A1Q96QR1 104 aa7.68□□□□□ -1.18
USP28-212ENST00000544750 RPL18AQ02543 176 aaKnown RBP7.67□□□□□ -1.18
USP28-212ENST00000544750 RNF151Q2KHN1 245 aa7.67□□□□□ -1.18
USP28-212ENST00000544750 PAPPA-AS1Q5QFB9 102 aa7.67□□□□□ -1.18
USP28-212ENST00000544750 LINC01561Q8N1V8 128 aa7.67□□□□□ -1.18
USP28-212ENST00000544750 SMCO4Q9NRQ5 59 aa7.67□□□□□ -1.18
USP28-212ENST00000544750 LINC01549A6NIU2 74 aa7.66□□□□□ -1.18
USP28-212ENST00000544750 F8WDY8 70 aa7.66□□□□□ -1.18
USP28-212ENST00000544750 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
USP28-212ENST00000544750 MRPL35Q9NZE8 188 aaKnown RBP7.66□□□□□ -1.18
USP28-212ENST00000544750 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
USP28-212ENST00000544750 LINC00614P0C842 121 aa7.65□□□□□ -1.18
USP28-212ENST00000544750 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
USP28-212ENST00000544750 IGLV5-45A0A087WSX0 123 aa7.64□□□□□ -1.19
USP28-212ENST00000544750 FAM168BA1KXE4 195 aa7.64□□□□□ -1.19
USP28-212ENST00000544750 NDUFA1O15239 70 aa7.64□□□□□ -1.19
USP28-212ENST00000544750 HERVK_113P63121 156 aa7.64□□□□□ -1.19
USP28-212ENST00000544750 PMCHL1Q16048 86 aa7.64□□□□□ -1.19
USP28-212ENST00000544750 KRTAP7-1Q8IUC3 87 aa7.64□□□□□ -1.19
USP28-212ENST00000544750 CST9LQ9H4G1 147 aa7.64□□□□□ -1.19
USP28-212ENST00000544750 TINCRA0A1B0GVN0 87 aa7.63□□□□□ -1.19
USP28-212ENST00000544750 HBDP02042 147 aa7.63□□□□□ -1.19
USP28-212ENST00000544750 RPL13AP40429 203 aaKnown RBP7.63□□□□□ -1.19
USP28-212ENST00000544750 SEC11AP67812 179 aa7.63□□□□□ -1.19
USP28-212ENST00000544750 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
USP28-212ENST00000544750 C2orf82Q6UX34 121 aa7.63□□□□□ -1.19
USP28-212ENST00000544750 SMIM1B2RUZ4 78 aa7.62□□□□□ -1.19
USP28-212ENST00000544750 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
USP28-212ENST00000544750 PMVKQ15126 192 aa7.62□□□□□ -1.19
USP28-212ENST00000544750 GEMIN7Q9H840 131 aaKnown RBP7.62□□□□□ -1.19
USP28-212ENST00000544750 Q8IZM0 81 aa7.61□□□□□ -1.19
USP28-212ENST00000544750 TRBV30A0A0K0K1B3 111 aa7.6□□□□□ -1.19
USP28-212ENST00000544750 TRGC2P03986 189 aa7.6□□□□□ -1.19
USP28-212ENST00000544750 RAB5BP61020 215 aa7.6□□□□□ -1.19
USP28-212ENST00000544750 LINC00469Q8N7U9 141 aa7.6□□□□□ -1.19
USP28-212ENST00000544750 TOMM7Q9P0U1 55 aa7.6□□□□□ -1.19
USP28-212ENST00000544750 COLCA2A8K830 154 aa7.59□□□□□ -1.19
USP28-212ENST00000544750 IGLC3P0DOY3 106 aa7.59□□□□□ -1.19
USP28-212ENST00000544750 LINC00310P59036 64 aa7.59□□□□□ -1.19
USP28-212ENST00000544750 CHCHD1Q96BP2 118 aaKnown RBP7.59□□□□□ -1.19
USP28-212ENST00000544750 FAM19A5Q7Z5A7 132 aaPredicted RBP7.58□□□□□ -1.2
USP28-212ENST00000544750 PACRGQ96M98 296 aaPredicted RBP7.58□□□□□ -1.2
USP28-212ENST00000544750 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
USP28-212ENST00000544750 PRSS2P07478 247 aa7.57□□□□□ -1.2
USP28-212ENST00000544750 SPINK8P0C7L1 97 aa7.57□□□□□ -1.2
USP28-212ENST00000544750 C6orf226Q5I0X4 101 aa7.57□□□□□ -1.2
USP28-212ENST00000544750 SCO1O75880 301 aa7.56□□□□□ -1.2
USP28-212ENST00000544750 ATP5LO75964 103 aa7.56□□□□□ -1.2
USP28-212ENST00000544750 TSPAN13O95857 204 aa7.56□□□□□ -1.2
USP28-212ENST00000544750 ZNF22P17026 224 aaPredicted RBP7.56□□□□□ -1.2
USP28-212ENST00000544750 GAGE2EQ4V326 116 aa7.56□□□□□ -1.2
USP28-212ENST00000544750 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
USP28-212ENST00000544750 GAGE2DQ9UEU5 116 aa7.56□□□□□ -1.2
USP28-212ENST00000544750 C11orf86A6NJI1 115 aa7.55□□□□□ -1.2
USP28-212ENST00000544750 F8VRH5 84 aa7.55□□□□□ -1.2
USP28-212ENST00000544750 M0QXV9 152 aa7.55□□□□□ -1.2
USP28-212ENST00000544750 CXCL5P42830 114 aa7.55□□□□□ -1.2
USP28-212ENST00000544750 NDUFA6P56556 154 aa7.55□□□□□ -1.2
USP28-212ENST00000544750 CKS1BP61024 79 aa7.55□□□□□ -1.2
USP28-212ENST00000544750 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
USP28-212ENST00000544750 FAM19A2Q8N3H0 131 aa7.55□□□□□ -1.2
USP28-212ENST00000544750 IGLV5-39A0A0G2JS06 123 aa7.54□□□□□ -1.2
USP28-212ENST00000544750 ZNF861PO60384 105 aa7.54□□□□□ -1.2
USP28-212ENST00000544750 BAGE3Q86Y29 109 aa7.54□□□□□ -1.2
USP28-212ENST00000544750 A0A087X002 238 aa7.53□□□□□ -1.2
USP28-212ENST00000544750 NUPR1O60356 82 aa7.53□□□□□ -1.2
USP28-212ENST00000544750 HSBP1O75506 76 aa7.53□□□□□ -1.2
USP28-212ENST00000544750 SERF1AO75920 110 aa7.53□□□□□ -1.2
USP28-212ENST00000544750 UBE2BP63146 152 aa7.53□□□□□ -1.2
USP28-212ENST00000544750 IFI27L1Q96BM0 104 aa7.53□□□□□ -1.2
USP28-212ENST00000544750 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.21
USP28-212ENST00000544750 H3BRM9 83 aa7.52□□□□□ -1.21
USP28-212ENST00000544750 CHTOPQ9Y3Y2 248 aaKnown RBP7.51□□□□□ -1.21
USP28-212ENST00000544750 XAGE1AQ9HD64 81 aa7.5□□□□□ -1.21
USP28-212ENST00000544750 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
USP28-212ENST00000544750 TMEM223A0PJW6 202 aa7.47□□□□□ -1.21
USP28-212ENST00000544750 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
USP28-212ENST00000544750 LEPROTL1O95214 131 aa7.47□□□□□ -1.21
USP28-212ENST00000544750 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
USP28-212ENST00000544750 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
USP28-212ENST00000544750 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
USP28-212ENST00000544750 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
USP28-212ENST00000544750 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
USP28-212ENST00000544750 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms