RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.1
CIT-214ENST00000544588 CARHSP1Q9Y2V2 147 aaKnown RBP8.15□□□□□ -1.1
CIT-214ENST00000544588 C10orf91Q5T1B1 145 aa8.14□□□□□ -1.11
CIT-214ENST00000544588 LINC00469Q8N7U9 141 aa8.14□□□□□ -1.11
CIT-214ENST00000544588 PSORS1C2Q9UIG4 136 aa8.14□□□□□ -1.11
CIT-214ENST00000544588 APOC3P02656 99 aa8.13□□□□□ -1.11
CIT-214ENST00000544588 TRAPPC1Q9Y5R8 145 aa8.13□□□□□ -1.11
CIT-214ENST00000544588 NDUFC2-KCTD14E9PQ53 114 aa8.12□□□□□ -1.11
CIT-214ENST00000544588 UBE2BP63146 152 aa8.12□□□□□ -1.11
CIT-214ENST00000544588 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
CIT-214ENST00000544588 NDUFA5Q16718 116 aa8.12□□□□□ -1.11
CIT-214ENST00000544588 FAM19A3Q7Z5A8 133 aa8.12□□□□□ -1.11
CIT-214ENST00000544588 Q8IZM0 81 aa8.12□□□□□ -1.11
CIT-214ENST00000544588 LINC01600Q96MT4 127 aa8.12□□□□□ -1.11
CIT-214ENST00000544588 LINC01549A6NIU2 74 aa8.11□□□□□ -1.11
CIT-214ENST00000544588 NDUFA6P56556 154 aa8.11□□□□□ -1.11
CIT-214ENST00000544588 M0QXV9 152 aa8.1□□□□□ -1.11
CIT-214ENST00000544588 PMVKQ15126 192 aa8.1□□□□□ -1.11
CIT-214ENST00000544588 CST9LQ9H4G1 147 aa8.1□□□□□ -1.11
CIT-214ENST00000544588 TINCRA0A1B0GVN0 87 aa8.09□□□□□ -1.11
CIT-214ENST00000544588 LINC01546A6NGU7 62 aa8.09□□□□□ -1.11
CIT-214ENST00000544588 SNAPINO95295 136 aa8.09□□□□□ -1.11
CIT-214ENST00000544588 C9orf129Q5T035 196 aaKnown RBP8.09□□□□□ -1.11
CIT-214ENST00000544588 XAGE1AQ9HD64 81 aa8.09□□□□□ -1.11
CIT-214ENST00000544588 F8VRH5 84 aa8.08□□□□□ -1.12
CIT-214ENST00000544588 SPINK8P0C7L1 97 aa8.08□□□□□ -1.12
CIT-214ENST00000544588 SVBPQ8N300 66 aa8.08□□□□□ -1.12
CIT-214ENST00000544588 SMIM1B2RUZ4 78 aa8.07□□□□□ -1.12
CIT-214ENST00000544588 IGLV7-43P04211 117 aa8.07□□□□□ -1.12
CIT-214ENST00000544588 LINC00614P0C842 121 aa8.07□□□□□ -1.12
CIT-214ENST00000544588 CXCL5P42830 114 aa8.07□□□□□ -1.12
CIT-214ENST00000544588 PDZD11Q5EBL8 140 aa8.07□□□□□ -1.12
CIT-214ENST00000544588 COX7B2Q8TF08 81 aa8.07□□□□□ -1.12
CIT-214ENST00000544588 H3BRM9 83 aa8.06□□□□□ -1.12
CIT-214ENST00000544588 RAB5BP61020 215 aa8.06□□□□□ -1.12
CIT-214ENST00000544588 PMCHL1Q16048 86 aa8.06□□□□□ -1.12
CIT-214ENST00000544588 KRTAP11-1Q8IUC1 163 aa8.06□□□□□ -1.12
CIT-214ENST00000544588 KRTAP7-1Q8IUC3 87 aa8.06□□□□□ -1.12
CIT-214ENST00000544588 C18orf32Q8TCD1 76 aa8.06□□□□□ -1.12
CIT-214ENST00000544588 ODF1Q14990 250 aa8.05□□□□□ -1.12
CIT-214ENST00000544588 DIRC1Q969H9 104 aa8.05□□□□□ -1.12
CIT-214ENST00000544588 HBDP02042 147 aa8.04□□□□□ -1.12
CIT-214ENST00000544588 C22orf24Q9Y442 160 aa8.04□□□□□ -1.12
CIT-214ENST00000544588 IGLV5-45A0A087WSX0 123 aa8.03□□□□□ -1.12
CIT-214ENST00000544588 KRTAP10-8P60410 259 aa8.03□□□□□ -1.12
CIT-214ENST00000544588 LBHQ53QV2 105 aaPredicted RBP8.03□□□□□ -1.12
CIT-214ENST00000544588 URB1-AS1Q96HZ7 61 aa8.03□□□□□ -1.12
CIT-214ENST00000544588 A0A096LNJ9 63 aa8.02□□□□□ -1.13
CIT-214ENST00000544588 BAGE3Q86Y29 109 aa8.02□□□□□ -1.13
CIT-214ENST00000544588 ATP5LO75964 103 aa8.01□□□□□ -1.13
CIT-214ENST00000544588 IGLC3P0DOY3 106 aa8.01□□□□□ -1.13
CIT-214ENST00000544588 TMEM170BQ5T4T1 132 aa8□□□□□ -1.13
CIT-214ENST00000544588 TNXBP22105 4242 aa8□□□□□ -1.13
CIT-214ENST00000544588 RNF213Q63HN8 5207 aa8□□□□□ -1.13
CIT-214ENST00000544588 H0Y9J4 135 aa7.99□□□□□ -1.13
CIT-214ENST00000544588 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
CIT-214ENST00000544588 PFN2P35080 140 aa7.99□□□□□ -1.13
CIT-214ENST00000544588 MRPL55Q7Z7F7 128 aaKnown RBP7.99□□□□□ -1.13
CIT-214ENST00000544588 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
CIT-214ENST00000544588 PRR26Q8N8Z3 221 aa7.98□□□□□ -1.13
CIT-214ENST00000544588 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
CIT-214ENST00000544588 NKAPP1Q8N9T2 125 aa7.97□□□□□ -1.13
CIT-214ENST00000544588 ZNF625Q96I27 306 aaPredicted RBP7.97□□□□□ -1.13
CIT-214ENST00000544588 CHTOPQ9Y3Y2 248 aaKnown RBP7.97□□□□□ -1.13
CIT-214ENST00000544588 C11orf86A6NJI1 115 aa7.96□□□□□ -1.14
CIT-214ENST00000544588 NUPR1O60356 82 aa7.96□□□□□ -1.14
CIT-214ENST00000544588 ZNF861PO60384 105 aa7.96□□□□□ -1.14
CIT-214ENST00000544588 CBLN2Q8IUK8 224 aa7.96□□□□□ -1.14
CIT-214ENST00000544588 CHCHD1Q96BP2 118 aaKnown RBP7.96□□□□□ -1.14
CIT-214ENST00000544588 LINC00167Q96N53 147 aa7.96□□□□□ -1.14
CIT-214ENST00000544588 TP73-AS1Q9UF72 201 aa7.96□□□□□ -1.14
CIT-214ENST00000544588 IGLV5-39A0A0G2JS06 123 aa7.95□□□□□ -1.14
CIT-214ENST00000544588 YPEL4Q96NS1 127 aa7.95□□□□□ -1.14
CIT-214ENST00000544588 HSBP1O75506 76 aa7.94□□□□□ -1.14
CIT-214ENST00000544588 IFI27L1Q96BM0 104 aa7.94□□□□□ -1.14
CIT-214ENST00000544588 ERG28Q9UKR5 140 aa7.94□□□□□ -1.14
CIT-214ENST00000544588 FAM19A2Q8N3H0 131 aa7.93□□□□□ -1.14
CIT-214ENST00000544588 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
CIT-214ENST00000544588 H0Y8G0 127 aa7.92□□□□□ -1.14
CIT-214ENST00000544588 BCE1O60756 84 aa7.92□□□□□ -1.14
CIT-214ENST00000544588 SCO1O75880 301 aa7.92□□□□□ -1.14
CIT-214ENST00000544588 TRGC2P03986 189 aa7.92□□□□□ -1.14
CIT-214ENST00000544588 RPL28P46779 137 aaKnown RBP7.92□□□□□ -1.14
CIT-214ENST00000544588 SLC7A5P1Q8MH63 180 aa7.92□□□□□ -1.14
CIT-214ENST00000544588 A0A0U1RRA0 63 aa7.91□□□□□ -1.14
CIT-214ENST00000544588 UBE2AP49459 152 aa7.91□□□□□ -1.14
CIT-214ENST00000544588 LINC00158P58513 81 aa7.91□□□□□ -1.14
CIT-214ENST00000544588 SND1-IT1Q9HBX3 110 aa7.91□□□□□ -1.14
CIT-214ENST00000544588 LRP2P98164 4655 aa7.9□□□□□ -1.14
CIT-214ENST00000544588 IGKV2-28A0A075B6P5 120 aa7.9□□□□□ -1.14
CIT-214ENST00000544588 TRAV12-1A0A0B4J245 112 aa7.9□□□□□ -1.14
CIT-214ENST00000544588 IGKV2D-28P01615 120 aa7.9□□□□□ -1.14
CIT-214ENST00000544588 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
CIT-214ENST00000544588 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.14
CIT-214ENST00000544588 COX17Q14061 63 aa7.9□□□□□ -1.14
CIT-214ENST00000544588 SFTA2Q6UW10 78 aa7.9□□□□□ -1.14
CIT-214ENST00000544588 IGLV5-37A0A075B6J1 123 aa7.89□□□□□ -1.15
CIT-214ENST00000544588 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
CIT-214ENST00000544588 TMEM223A0PJW6 202 aa7.88□□□□□ -1.15
CIT-214ENST00000544588 RPL13AP40429 203 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms