RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 NOTCH3Q9UM47 2321 aa8.65□□□□□ -1.03
LRTOMT-221ENST00000544409 A0A087WVE0 104 aa8.65□□□□□ -1.03
LRTOMT-221ENST00000544409 KRTAP10-3P60369 221 aa8.65□□□□□ -1.03
LRTOMT-221ENST00000544409 JMJD1CQ15652 2540 aa8.64□□□□□ -1.03
LRTOMT-221ENST00000544409 TMEM258P61165 79 aa8.64□□□□□ -1.03
LRTOMT-221ENST00000544409 FHL2Q14192 279 aa8.64□□□□□ -1.03
LRTOMT-221ENST00000544409 Q5XG85 94 aa8.64□□□□□ -1.03
LRTOMT-221ENST00000544409 HIST1H4AP62805 103 aaKnown RBP8.63□□□□□ -1.03
LRTOMT-221ENST00000544409 RPL18AQ02543 176 aaKnown RBP8.63□□□□□ -1.03
LRTOMT-221ENST00000544409 LINC00482Q8N8I6 264 aa8.63□□□□□ -1.03
LRTOMT-221ENST00000544409 ZNF625Q96I27 306 aaPredicted RBP8.63□□□□□ -1.03
LRTOMT-221ENST00000544409 COX7A2LO14548 114 aa8.63□□□□□ -1.03
LRTOMT-221ENST00000544409 COPS9Q8WXC6 57 aa8.63□□□□□ -1.03
LRTOMT-221ENST00000544409 Q9HAA7 133 aa8.63□□□□□ -1.03
LRTOMT-221ENST00000544409 PRIMA1Q86XR5 153 aa8.63□□□□□ -1.03
LRTOMT-221ENST00000544409 LINC00308Q8TCZ7 52 aa8.63□□□□□ -1.03
LRTOMT-221ENST00000544409 ITPR2Q14571 2701 aa8.62□□□□□ -1.03
LRTOMT-221ENST00000544409 LY6G6DO95868 133 aa8.61□□□□□ -1.03
LRTOMT-221ENST00000544409 SERP2Q8N6R1 65 aa8.61□□□□□ -1.03
LRTOMT-221ENST00000544409 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
LRTOMT-221ENST00000544409 TRBV6-8A0A0A6YYG3 113 aa8.61□□□□□ -1.03
LRTOMT-221ENST00000544409 HIVEP2P31629 2446 aa8.61□□□□□ -1.03
LRTOMT-221ENST00000544409 FAM218AQ96MZ4 157 aa8.61□□□□□ -1.03
LRTOMT-221ENST00000544409 DEFB130BP0DP73 79 aa8.6□□□□□ -1.03
LRTOMT-221ENST00000544409 DEFB130AP0DP74 79 aa8.6□□□□□ -1.03
LRTOMT-221ENST00000544409 UPK3BQ9BT76 320 aa8.6□□□□□ -1.03
LRTOMT-221ENST00000544409 UNC79Q9P2D8 2635 aa8.59□□□□□ -1.03
LRTOMT-221ENST00000544409 INAFM2P0DMQ5 153 aa8.59□□□□□ -1.04
LRTOMT-221ENST00000544409 LINC00612Q8N6U2 182 aa8.59□□□□□ -1.04
LRTOMT-221ENST00000544409 IGKV3OR2-268A0A0C4DH90 116 aa8.58□□□□□ -1.04
LRTOMT-221ENST00000544409 IGLV4-60A0A075B6I1 120 aa8.58□□□□□ -1.04
LRTOMT-221ENST00000544409 USP17L23D6RBM5 183 aa8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 DNAL4O96015 105 aa8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 COX7B2Q8TF08 81 aa8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 C14orf132Q9NPU4 83 aa8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 NIPBLQ6KC79 2804 aaeCLIP8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 C2CD3Q4AC94 2353 aa8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 C9orf66Q5T8R8 295 aa8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 SOSTDC1Q6X4U4 206 aa8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 LINC01561Q8N1V8 128 aa8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 X6R8D5 127 aa8.57□□□□□ -1.04
LRTOMT-221ENST00000544409 LINC00846Q9NV44 126 aa8.56□□□□□ -1.04
LRTOMT-221ENST00000544409 GYPEP15421 78 aa8.56□□□□□ -1.04
LRTOMT-221ENST00000544409 MALP21145 153 aa8.56□□□□□ -1.04
LRTOMT-221ENST00000544409 MRAPQ8TCY5 172 aa8.56□□□□□ -1.04
LRTOMT-221ENST00000544409 TOMM7Q9P0U1 55 aa8.55□□□□□ -1.04
LRTOMT-221ENST00000544409 C1orf43Q9BWL3 253 aa8.54□□□□□ -1.04
LRTOMT-221ENST00000544409 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
LRTOMT-221ENST00000544409 LINC00336Q6ZUF6 198 aa8.54□□□□□ -1.04
LRTOMT-221ENST00000544409 PRO0255Q9UI72 69 aa8.54□□□□□ -1.04
LRTOMT-221ENST00000544409 INAFM1C9JVW0 142 aa8.53□□□□□ -1.04
LRTOMT-221ENST00000544409 A0A087WZ39 114 aa8.53□□□□□ -1.04
LRTOMT-221ENST00000544409 PFN2P35080 140 aa8.53□□□□□ -1.04
LRTOMT-221ENST00000544409 LINC00959A0A1B0GUT2 108 aa8.52□□□□□ -1.05
LRTOMT-221ENST00000544409 LYRM9A8MSI8 78 aa8.52□□□□□ -1.05
LRTOMT-221ENST00000544409 FAM222AQ5U5X8 452 aa8.52□□□□□ -1.05
LRTOMT-221ENST00000544409 SPATA3Q8NHX4 192 aa8.52□□□□□ -1.05
LRTOMT-221ENST00000544409 MAST4O15021 2626 aa8.52□□□□□ -1.05
LRTOMT-221ENST00000544409 WFDC9Q8NEX5 89 aa8.51□□□□□ -1.05
LRTOMT-221ENST00000544409 PKIGQ9Y2B9 76 aa8.51□□□□□ -1.05
LRTOMT-221ENST00000544409 MIR7-3HGQ8N6C7 128 aa8.51□□□□□ -1.05
LRTOMT-221ENST00000544409 A0A1B0GUV1 79 aa8.51□□□□□ -1.05
LRTOMT-221ENST00000544409 PAX4O43316 350 aa8.51□□□□□ -1.05
LRTOMT-221ENST00000544409 Q6JHZ5 121 aa8.51□□□□□ -1.05
LRTOMT-221ENST00000544409 APOC4P55056 127 aa8.5□□□□□ -1.05
LRTOMT-221ENST00000544409 LINC00158P58513 81 aa8.5□□□□□ -1.05
LRTOMT-221ENST00000544409 SS18Q15532 418 aa8.5□□□□□ -1.05
LRTOMT-221ENST00000544409 TRAV23DV6A0A075B6W5 121 aa8.5□□□□□ -1.05
LRTOMT-221ENST00000544409 TRAV13-2A0A0B4J235 113 aa8.5□□□□□ -1.05
LRTOMT-221ENST00000544409 DEFB135Q30KP9 77 aa8.5□□□□□ -1.05
LRTOMT-221ENST00000544409 C20orf197Q8N268 126 aa8.49□□□□□ -1.05
LRTOMT-221ENST00000544409 A0A096LPF7 62 aa8.49□□□□□ -1.05
LRTOMT-221ENST00000544409 IBA57-AS1B1ANH7 110 aa8.49□□□□□ -1.05
LRTOMT-221ENST00000544409 NCR3O14931 201 aa8.49□□□□□ -1.05
LRTOMT-221ENST00000544409 PRO0628Q9UI54 55 aa8.49□□□□□ -1.05
LRTOMT-221ENST00000544409 A0A087WYN8 130 aa8.49□□□□□ -1.05
LRTOMT-221ENST00000544409 GHRHP01286 108 aa8.49□□□□□ -1.05
LRTOMT-221ENST00000544409 CRPP02741 224 aa8.49□□□□□ -1.05
LRTOMT-221ENST00000544409 SND1-IT1Q9HBX3 110 aa8.48□□□□□ -1.05
LRTOMT-221ENST00000544409 FN1P02751 2386 aaKnown RBP8.48□□□□□ -1.05
LRTOMT-221ENST00000544409 DEFB4AO15263 64 aa8.47□□□□□ -1.05
LRTOMT-221ENST00000544409 XCL1P47992 114 aa8.47□□□□□ -1.05
LRTOMT-221ENST00000544409 IGHV4-28A0A0C4DH34 117 aa8.47□□□□□ -1.05
LRTOMT-221ENST00000544409 RPL28P46779 137 aaKnown RBP8.47□□□□□ -1.05
LRTOMT-221ENST00000544409 C6orf226Q5I0X4 101 aa8.47□□□□□ -1.05
LRTOMT-221ENST00000544409 DAD1P61803 113 aa8.47□□□□□ -1.05
LRTOMT-221ENST00000544409 SLPIP03973 132 aa8.46□□□□□ -1.06
LRTOMT-221ENST00000544409 CLPSL2Q6UWE3 100 aa8.46□□□□□ -1.06
LRTOMT-221ENST00000544409 CCL18P55774 89 aa8.45□□□□□ -1.06
LRTOMT-221ENST00000544409 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
LRTOMT-221ENST00000544409 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
LRTOMT-221ENST00000544409 LINC00337Q8N6G1 96 aa8.45□□□□□ -1.06
LRTOMT-221ENST00000544409 C11orf68Q9H3H3 251 aaKnown RBP8.45□□□□□ -1.06
LRTOMT-221ENST00000544409 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
LRTOMT-221ENST00000544409 NDUFC2O95298 119 aa8.45□□□□□ -1.06
LRTOMT-221ENST00000544409 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
LRTOMT-221ENST00000544409 FAM19A1Q7Z5A9 133 aa8.45□□□□□ -1.06
LRTOMT-221ENST00000544409 MIFP14174 115 aa8.44□□□□□ -1.06
LRTOMT-221ENST00000544409 Q8IZM0 81 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms