RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 MRPL55Q7Z7F7 128 aaKnown RBP13.33□□□□□ -0.28
CDKN3-207ENST00000543789 Q8N8P6 123 aa13.33□□□□□ -0.28
CDKN3-207ENST00000543789 BCE1O60756 84 aa13.32□□□□□ -0.28
CDKN3-207ENST00000543789 NPSP0C0P6 89 aa13.32□□□□□ -0.28
CDKN3-207ENST00000543789 CRYGAP11844 174 aa13.32□□□□□ -0.28
CDKN3-207ENST00000543789 FAM19A3Q7Z5A8 133 aa13.32□□□□□ -0.28
CDKN3-207ENST00000543789 TYMSOSQ8TAI1 123 aa13.32□□□□□ -0.28
CDKN3-207ENST00000543789 KRTAP9-2Q9BYQ4 174 aa13.32□□□□□ -0.28
CDKN3-207ENST00000543789 IGIPA6NJ69 53 aa13.3□□□□□ -0.28
CDKN3-207ENST00000543789 F8VRH5 84 aa13.3□□□□□ -0.28
CDKN3-207ENST00000543789 ORMDL2Q53FV1 153 aa13.3□□□□□ -0.28
CDKN3-207ENST00000543789 HERVK_113P63121 156 aa13.29□□□□□ -0.28
CDKN3-207ENST00000543789 SEC11AP67812 179 aa13.29□□□□□ -0.28
CDKN3-207ENST00000543789 CDKN2A-AS1Q9UH64 79 aa13.29□□□□□ -0.28
CDKN3-207ENST00000543789 K7EMI3 77 aa13.27□□□□□ -0.29
CDKN3-207ENST00000543789 GEMIN7Q9H840 131 aaKnown RBP13.27□□□□□ -0.29
CDKN3-207ENST00000543789 PAPPA-AS1Q5QFB9 102 aa13.26□□□□□ -0.29
CDKN3-207ENST00000543789 LINC00167Q96N53 147 aa13.26□□□□□ -0.29
CDKN3-207ENST00000543789 RPL37AP8A6NKH3 93 aa13.25□□□□□ -0.29
CDKN3-207ENST00000543789 CXCL5P42830 114 aa13.25□□□□□ -0.29
CDKN3-207ENST00000543789 ANAPC11Q9NYG5 84 aa13.24□□□□□ -0.29
CDKN3-207ENST00000543789 G0S2P27469 103 aa13.22□□□□□ -0.29
CDKN3-207ENST00000543789 NXT2Q9NPJ8 142 aaKnown RBP13.22□□□□□ -0.29
CDKN3-207ENST00000543789 LCE2AQ5TA79 106 aaPredicted RBP13.21□□□□□ -0.29
CDKN3-207ENST00000543789 GAGE10A6NGK3 116 aa13.2□□□□□ -0.3
CDKN3-207ENST00000543789 CLLU1Q5K131 121 aa13.2□□□□□ -0.3
CDKN3-207ENST00000543789 TIMM17AQ99595 171 aa13.2□□□□□ -0.3
CDKN3-207ENST00000543789 KRTAP13-2Q52LG2 175 aa13.19□□□□□ -0.3
CDKN3-207ENST00000543789 UBE2AP49459 152 aa13.18□□□□□ -0.3
CDKN3-207ENST00000543789 TOMM6Q96B49 74 aa13.18□□□□□ -0.3
CDKN3-207ENST00000543789 ANAPC16Q96DE5 110 aa13.18□□□□□ -0.3
CDKN3-207ENST00000543789 SMIM1B2RUZ4 78 aa13.17□□□□□ -0.3
CDKN3-207ENST00000543789 MT-ND4LP03901 98 aa13.17□□□□□ -0.3
CDKN3-207ENST00000543789 PDZD11Q5EBL8 140 aa13.17□□□□□ -0.3
CDKN3-207ENST00000543789 KRTAP13-1Q8IUC0 172 aa13.17□□□□□ -0.3
CDKN3-207ENST00000543789 COX7B2Q8TF08 81 aa13.17□□□□□ -0.3
CDKN3-207ENST00000543789 RETNLBQ9BQ08 111 aa13.17□□□□□ -0.3
CDKN3-207ENST00000543789 IGLV5-37A0A075B6J1 123 aa13.16□□□□□ -0.3
CDKN3-207ENST00000543789 FAM229BQ4G0N7 80 aa13.16□□□□□ -0.3
CDKN3-207ENST00000543789 LINC00304Q8N9R0 145 aa13.16□□□□□ -0.3
CDKN3-207ENST00000543789 RAB5BP61020 215 aa13.15□□□□□ -0.3
CDKN3-207ENST00000543789 PNRC1Q12796 327 aaPredicted RBP13.15□□□□□ -0.3
CDKN3-207ENST00000543789 ERASQ7Z444 233 aa13.15□□□□□ -0.3
CDKN3-207ENST00000543789 NKAPP1Q8N9T2 125 aa13.15□□□□□ -0.3
CDKN3-207ENST00000543789 TINCRA0A1B0GVN0 87 aa13.14□□□□□ -0.31
CDKN3-207ENST00000543789 IFITM2Q01629 132 aa13.14□□□□□ -0.31
CDKN3-207ENST00000543789 SCGB3A1Q96QR1 104 aa13.14□□□□□ -0.31
CDKN3-207ENST00000543789 FAT4Q6V0I7 4981 aa13.13□□□□□ -0.31
CDKN3-207ENST00000543789 CDIP1Q9H305 208 aa13.13□□□□□ -0.31
CDKN3-207ENST00000543789 IGLV5-45A0A087WSX0 123 aa13.11□□□□□ -0.31
CDKN3-207ENST00000543789 IGKV2D-26A0A0A0MRZ7 120 aa13.11□□□□□ -0.31
CDKN3-207ENST00000543789 ADCYAP1P18509 176 aa13.1□□□□□ -0.31
CDKN3-207ENST00000543789 TPRXLQ17RH7 258 aa13.1□□□□□ -0.31
CDKN3-207ENST00000543789 IGLV7-46A0A075B6I9 117 aa13.09□□□□□ -0.31
CDKN3-207ENST00000543789 IGKV2-28A0A075B6P5 120 aa13.09□□□□□ -0.31
CDKN3-207ENST00000543789 IGKV2D-28P01615 120 aa13.09□□□□□ -0.31
CDKN3-207ENST00000543789 UQCC3Q6UW78 93 aa13.09□□□□□ -0.31
CDKN3-207ENST00000543789 SPINK8P0C7L1 97 aa13.08□□□□□ -0.32
CDKN3-207ENST00000543789 CTAG1AP78358 180 aa13.08□□□□□ -0.32
CDKN3-207ENST00000543789 CST9LQ9H4G1 147 aa13.08□□□□□ -0.32
CDKN3-207ENST00000543789 SCO1O75880 301 aa13.07□□□□□ -0.32
CDKN3-207ENST00000543789 KIAA1644Q3SXP7 199 aa13.07□□□□□ -0.32
CDKN3-207ENST00000543789 MUC17Q685J3 4493 aa13.06□□□□□ -0.32
CDKN3-207ENST00000543789 LINC01549A6NIU2 74 aa13.05□□□□□ -0.32
CDKN3-207ENST00000543789 ATP5LO75964 103 aa13.05□□□□□ -0.32
CDKN3-207ENST00000543789 MRPL18Q9H0U6 180 aaKnown RBP13.05□□□□□ -0.32
CDKN3-207ENST00000543789 TMEM218A2RU14 115 aa13.04□□□□□ -0.32
CDKN3-207ENST00000543789 PRLHP81277 87 aa13.04□□□□□ -0.32
CDKN3-207ENST00000543789 FAM19A1Q7Z5A9 133 aa13.03□□□□□ -0.32
CDKN3-207ENST00000543789 KRTAP9-6A0A140TA67 174 aa13.02□□□□□ -0.33
CDKN3-207ENST00000543789 H3BRM9 83 aa13.02□□□□□ -0.33
CDKN3-207ENST00000543789 PFN2P35080 140 aa13.02□□□□□ -0.33
CDKN3-207ENST00000543789 PMVKQ15126 192 aa13.02□□□□□ -0.33
CDKN3-207ENST00000543789 COMMD7Q86VX2 200 aa13.01□□□□□ -0.33
CDKN3-207ENST00000543789 TMEM126AQ9H061 195 aa13.01□□□□□ -0.33
CDKN3-207ENST00000543789 LINC01546A6NGU7 62 aa13□□□□□ -0.33
CDKN3-207ENST00000543789 TMEM238C9JI98 176 aa13□□□□□ -0.33
CDKN3-207ENST00000543789 PPDPFQ9H3Y8 114 aa13□□□□□ -0.33
CDKN3-207ENST00000543789 VPREB1P12018 145 aa12.99□□□□□ -0.33
CDKN3-207ENST00000543789 PLEKHB2Q96CS7 222 aa12.99□□□□□ -0.33
CDKN3-207ENST00000543789 RPL24P83731 157 aaKnown RBP12.98□□□□□ -0.33
CDKN3-207ENST00000543789 SEC11CQ9BY50 192 aa12.98□□□□□ -0.33
CDKN3-207ENST00000543789 SND1-IT1Q9HBX3 110 aa12.98□□□□□ -0.33
CDKN3-207ENST00000543789 M0R378 163 aa12.97□□□□□ -0.33
CDKN3-207ENST00000543789 CBLN2Q8IUK8 224 aa12.97□□□□□ -0.33
CDKN3-207ENST00000543789 C3orf22Q8N5N4 141 aa12.96□□□□□ -0.33
CDKN3-207ENST00000543789 IGLV5-39A0A0G2JS06 123 aa12.95□□□□□ -0.34
CDKN3-207ENST00000543789 SPAG11AQ6PDA7 123 aa12.95□□□□□ -0.34
CDKN3-207ENST00000543789 GNB1LQ9BYB4 327 aa12.95□□□□□ -0.34
CDKN3-207ENST00000543789 ERG28Q9UKR5 140 aa12.95□□□□□ -0.34
CDKN3-207ENST00000543789 COX17Q14061 63 aa12.94□□□□□ -0.34
CDKN3-207ENST00000543789 TRAV9-1A0A075B6T8 112 aa12.93□□□□□ -0.34
CDKN3-207ENST00000543789 IGLC3P0DOY3 106 aa12.93□□□□□ -0.34
CDKN3-207ENST00000543789 FA2HQ7L5A8 372 aa12.93□□□□□ -0.34
CDKN3-207ENST00000543789 HIGD2AQ9BW72 106 aa12.91□□□□□ -0.34
CDKN3-207ENST00000543789 SMCO4Q9NRQ5 59 aa12.91□□□□□ -0.34
CDKN3-207ENST00000543789 S100PP25815 95 aa12.9□□□□□ -0.34
CDKN3-207ENST00000543789 ZNF625Q96I27 306 aaPredicted RBP12.9□□□□□ -0.34
CDKN3-207ENST00000543789 ZNF22P17026 224 aaPredicted RBP12.89□□□□□ -0.35
CDKN3-207ENST00000543789 NDUFA6P56556 154 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms