RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 IGIPA6NJ69 53 aa4.41□□□□□ -1.7
NUP43-206ENST00000543637 KRTAP10-8P60410 259 aa4.41□□□□□ -1.7
NUP43-206ENST00000543637 ZC2HC1BQ5TFG8 222 aa4.41□□□□□ -1.7
NUP43-206ENST00000543637 FAM19A3Q7Z5A8 133 aa4.41□□□□□ -1.7
NUP43-206ENST00000543637 Q8IZM0 81 aa4.41□□□□□ -1.7
NUP43-206ENST00000543637 TOMM6Q96B49 74 aa4.41□□□□□ -1.7
NUP43-206ENST00000543637 TIMM17AQ99595 171 aa4.41□□□□□ -1.7
NUP43-206ENST00000543637 SEC11CQ9BY50 192 aa4.41□□□□□ -1.7
NUP43-206ENST00000543637 GNB1LQ9BYB4 327 aa4.41□□□□□ -1.7
NUP43-206ENST00000543637 FAM168BA1KXE4 195 aa4.4□□□□□ -1.71
NUP43-206ENST00000543637 M0QXV9 152 aa4.4□□□□□ -1.71
NUP43-206ENST00000543637 IGLV7-43P04211 117 aa4.4□□□□□ -1.71
NUP43-206ENST00000543637 FABP9Q0Z7S8 132 aa4.4□□□□□ -1.71
NUP43-206ENST00000543637 LBHQ53QV2 105 aaPredicted RBP4.4□□□□□ -1.71
NUP43-206ENST00000543637 LINC00173Q6ZV60 143 aa4.4□□□□□ -1.71
NUP43-206ENST00000543637 FA2HQ7L5A8 372 aa4.4□□□□□ -1.71
NUP43-206ENST00000543637 F8VRH5 84 aa4.39□□□□□ -1.71
NUP43-206ENST00000543637 CXCL5P42830 114 aa4.39□□□□□ -1.71
NUP43-206ENST00000543637 LINC00469Q8N7U9 141 aa4.39□□□□□ -1.71
NUP43-206ENST00000543637 RPS10P5Q9NQ39 176 aa4.39□□□□□ -1.71
NUP43-206ENST00000543637 CDKN2A-AS1Q9UH64 79 aa4.39□□□□□ -1.71
NUP43-206ENST00000543637 TINCRA0A1B0GVN0 87 aa4.38□□□□□ -1.71
NUP43-206ENST00000543637 H3BRM9 83 aa4.38□□□□□ -1.71
NUP43-206ENST00000543637 NDUFA6P56556 154 aa4.38□□□□□ -1.71
NUP43-206ENST00000543637 ODF1Q14990 250 aa4.38□□□□□ -1.71
NUP43-206ENST00000543637 PMVKQ15126 192 aa4.38□□□□□ -1.71
NUP43-206ENST00000543637 PDZD11Q5EBL8 140 aa4.38□□□□□ -1.71
NUP43-206ENST00000543637 COMMD7Q86VX2 200 aa4.38□□□□□ -1.71
NUP43-206ENST00000543637 MRPL18Q9H0U6 180 aaKnown RBP4.38□□□□□ -1.71
NUP43-206ENST00000543637 HERC1Q15751 4861 aa4.38□□□□□ -1.71
NUP43-206ENST00000543637 H0Y9J4 135 aa4.37□□□□□ -1.71
NUP43-206ENST00000543637 NUPR1O60356 82 aa4.37□□□□□ -1.71
NUP43-206ENST00000543637 ADCYAP1P18509 176 aa4.37□□□□□ -1.71
NUP43-206ENST00000543637 RHEBQ15382 184 aa4.37□□□□□ -1.71
NUP43-206ENST00000543637 C9orf129Q5T035 196 aaKnown RBP4.37□□□□□ -1.71
NUP43-206ENST00000543637 COX7B2Q8TF08 81 aa4.37□□□□□ -1.71
NUP43-206ENST00000543637 CST9LQ9H4G1 147 aa4.37□□□□□ -1.71
NUP43-206ENST00000543637 C22orf24Q9Y442 160 aa4.37□□□□□ -1.71
NUP43-206ENST00000543637 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
NUP43-206ENST00000543637 IGLV1-50A0A075B6I6 118 aa4.36□□□□□ -1.71
NUP43-206ENST00000543637 RAB5BP61020 215 aa4.36□□□□□ -1.71
NUP43-206ENST00000543637 IFITM2Q01629 132 aa4.36□□□□□ -1.71
NUP43-206ENST00000543637 NDUFA5Q16718 116 aa4.36□□□□□ -1.71
NUP43-206ENST00000543637 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
NUP43-206ENST00000543637 TRAPPC1Q9Y5R8 145 aa4.36□□□□□ -1.71
NUP43-206ENST00000543637 LINC01546A6NGU7 62 aa4.35□□□□□ -1.71
NUP43-206ENST00000543637 ATP5LO75964 103 aa4.35□□□□□ -1.71
NUP43-206ENST00000543637 SPINK8P0C7L1 97 aa4.35□□□□□ -1.71
NUP43-206ENST00000543637 LINC00614P0C842 121 aa4.35□□□□□ -1.71
NUP43-206ENST00000543637 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
NUP43-206ENST00000543637 MRPL55Q7Z7F7 128 aaKnown RBP4.35□□□□□ -1.71
NUP43-206ENST00000543637 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
NUP43-206ENST00000543637 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
NUP43-206ENST00000543637 PKHD1L1Q86WI1 4243 aa4.34□□□□□ -1.71
NUP43-206ENST00000543637 SMIM1B2RUZ4 78 aa4.34□□□□□ -1.71
NUP43-206ENST00000543637 ZNF861PO60384 105 aa4.34□□□□□ -1.71
NUP43-206ENST00000543637 SNAPINO95295 136 aa4.34□□□□□ -1.71
NUP43-206ENST00000543637 RPL28P46779 137 aaKnown RBP4.34□□□□□ -1.71
NUP43-206ENST00000543637 KRTAP11-1Q8IUC1 163 aa4.34□□□□□ -1.71
NUP43-206ENST00000543637 NKAPP1Q8N9T2 125 aa4.34□□□□□ -1.71
NUP43-206ENST00000543637 TP73-AS1Q9UF72 201 aa4.34□□□□□ -1.71
NUP43-206ENST00000543637 IGLV5-45A0A087WSX0 123 aa4.33□□□□□ -1.72
NUP43-206ENST00000543637 APOC3P02656 99 aa4.33□□□□□ -1.72
NUP43-206ENST00000543637 PFN2P35080 140 aa4.33□□□□□ -1.72
NUP43-206ENST00000543637 C10orf91Q5T1B1 145 aa4.33□□□□□ -1.72
NUP43-206ENST00000543637 KRTAP7-1Q8IUC3 87 aa4.33□□□□□ -1.72
NUP43-206ENST00000543637 CARHSP1Q9Y2V2 147 aaKnown RBP4.33□□□□□ -1.72
NUP43-206ENST00000543637 LRP1Q07954 4544 aaKnown RBP4.33□□□□□ -1.72
NUP43-206ENST00000543637 RPL37AP8A6NKH3 93 aa4.32□□□□□ -1.72
NUP43-206ENST00000543637 HBDP02042 147 aa4.32□□□□□ -1.72
NUP43-206ENST00000543637 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
NUP43-206ENST00000543637 BAGE3Q86Y29 109 aa4.32□□□□□ -1.72
NUP43-206ENST00000543637 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
NUP43-206ENST00000543637 FAT3Q8TDW7 4589 aa4.32□□□□□ -1.72
NUP43-206ENST00000543637 BCE1O60756 84 aa4.31□□□□□ -1.72
NUP43-206ENST00000543637 ATP6V1G1O75348 118 aa4.31□□□□□ -1.72
NUP43-206ENST00000543637 IGLC3P0DOY3 106 aa4.31□□□□□ -1.72
NUP43-206ENST00000543637 UBE2AP49459 152 aa4.31□□□□□ -1.72
NUP43-206ENST00000543637 RPL24P83731 157 aaKnown RBP4.31□□□□□ -1.72
NUP43-206ENST00000543637 COX17Q14061 63 aa4.31□□□□□ -1.72
NUP43-206ENST00000543637 TMEM170BQ5T4T1 132 aa4.31□□□□□ -1.72
NUP43-206ENST00000543637 SVBPQ8N300 66 aa4.31□□□□□ -1.72
NUP43-206ENST00000543637 C18orf32Q8TCD1 76 aa4.31□□□□□ -1.72
NUP43-206ENST00000543637 GAGE10A6NGK3 116 aa4.3□□□□□ -1.72
NUP43-206ENST00000543637 A6NJY4 79 aa4.3□□□□□ -1.72
NUP43-206ENST00000543637 CHTOPQ9Y3Y2 248 aaKnown RBP4.3□□□□□ -1.72
NUP43-206ENST00000543637 IGLV5-37A0A075B6J1 123 aa4.29□□□□□ -1.72
NUP43-206ENST00000543637 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
NUP43-206ENST00000543637 CRYGAP11844 174 aa4.29□□□□□ -1.72
NUP43-206ENST00000543637 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
NUP43-206ENST00000543637 LINC00158P58513 81 aa4.29□□□□□ -1.72
NUP43-206ENST00000543637 PMCHL1Q16048 86 aa4.29□□□□□ -1.72
NUP43-206ENST00000543637 PRR4Q16378 134 aa4.29□□□□□ -1.72
NUP43-206ENST00000543637 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
NUP43-206ENST00000543637 TYMSOSQ8TAI1 123 aa4.29□□□□□ -1.72
NUP43-206ENST00000543637 ZNF625Q96I27 306 aaPredicted RBP4.29□□□□□ -1.72
NUP43-206ENST00000543637 ERG28Q9UKR5 140 aa4.29□□□□□ -1.72
NUP43-206ENST00000543637 IGKV2-28A0A075B6P5 120 aa4.28□□□□□ -1.72
NUP43-206ENST00000543637 IGLV5-39A0A0G2JS06 123 aa4.28□□□□□ -1.72
NUP43-206ENST00000543637 IGKV2D-28P01615 120 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms