RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 FAM19A4Q96LR4 140 aa4.44□□□□□ -1.7
CIT-213ENST00000543324 IMUPQ9GZP8 106 aa4.44□□□□□ -1.7
CIT-213ENST00000543324 AGPAT4-IT1Q9H0P7 198 aa4.44□□□□□ -1.7
CIT-213ENST00000543324 TRAV12-2A0A075B6T6 113 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 TRAV26-2A0A0B4J265 109 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 IGIPA6NJ69 53 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 C9JAW5 83 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 DAD1P61803 113 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 ZNF876PQ49A33 203 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 TMEM170BQ5T4T1 132 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 ZNRF2Q8NHG8 242 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 NTN5Q8WTR8 489 aaPredicted RBP4.43□□□□□ -1.7
CIT-213ENST00000543324 UBE2WQ96B02 151 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 C16orf74Q96GX8 76 aa4.43□□□□□ -1.7
CIT-213ENST00000543324 LPAP08519 4548 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 TRAV21A0A0B4J279 112 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 TRBV6-5A0A0K0K1A5 114 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 A4D1N5 150 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 KLLNB2CW77 178 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 H3BVH4 76 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 J3QQQ9 107 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 M0R2P5 195 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 EIF4EBP3O60516 100 aaPredicted RBP4.42□□□□□ -1.7
CIT-213ENST00000543324 TSHBP01222 138 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 ATP5G1P05496 136 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 ACYP1P07311 99 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 POLR2KP53803 58 aaKnown RBP4.42□□□□□ -1.7
CIT-213ENST00000543324 TSPEAR-AS2P59090 65 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 SMIM20Q8N5G0 67 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 LINC00477Q96M19 166 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 LINC00467Q9BRT7 94 aa4.42□□□□□ -1.7
CIT-213ENST00000543324 TMEM223A0PJW6 202 aa4.41□□□□□ -1.7
CIT-213ENST00000543324 H3BNG1 76 aa4.41□□□□□ -1.7
CIT-213ENST00000543324 LGALS3P17931 250 aaKnown RBP4.41□□□□□ -1.7
CIT-213ENST00000543324 DAZ2Q13117 558 aaKnown RBP4.41□□□□□ -1.7
CIT-213ENST00000543324 RHOHQ15669 191 aa4.41□□□□□ -1.7
CIT-213ENST00000543324 MEIG1Q5JSS6 88 aa4.41□□□□□ -1.7
CIT-213ENST00000543324 FAM159AQ6UWV7 190 aa4.41□□□□□ -1.7
CIT-213ENST00000543324 C11orf72Q8NBR9 251 aa4.41□□□□□ -1.7
CIT-213ENST00000543324 RPL39LQ96EH5 51 aaKnown RBP4.41□□□□□ -1.7
CIT-213ENST00000543324 LINC01587Q99440 93 aa4.41□□□□□ -1.7
CIT-213ENST00000543324 KIF25-AS1Q9Y6Z4 181 aa4.41□□□□□ -1.7
CIT-213ENST00000543324 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.7
CIT-213ENST00000543324 TRBV27A0A0K0K1C4 114 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 A0A1B0GX51 115 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 VCYO14598 125 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 HTN3P15516 51 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 LINC00315P59091 139 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 ZFAND2AQ8N6M9 145 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 TMEM101Q96IK0 257 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 DNAJC30Q96LL9 226 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 UPK3BQ9BT76 320 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 KRTAP1-5Q9BYS1 174 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 LINC00588Q9Y4M8 146 aa4.4□□□□□ -1.71
CIT-213ENST00000543324 NBDYA0A0U1RRE5 68 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 LST1O00453 97 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 DEFB130BP0DP73 79 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 DEFB130AP0DP74 79 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 RNASE4P34096 147 aaKnown RBP4.39□□□□□ -1.71
CIT-213ENST00000543324 ANXA2RQ3ZCQ2 193 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 PRR9Q5T870 116 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 SFTA2Q6UW10 78 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 C2orf82Q6UX34 121 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 SDIM1Q6ZPB5 146 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 Q6ZQT7 251 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 MUSTN1Q8IVN3 82 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 C6orf223Q8N319 242 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 NOP10Q9NPE3 64 aaKnown RBP4.39□□□□□ -1.71
CIT-213ENST00000543324 PHLDA3Q9Y5J5 127 aa4.39□□□□□ -1.71
CIT-213ENST00000543324 A0A0J9YXY3 114 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 F5H768 121 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 H7C423 109 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 TRIAP1O43715 76 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 TIMM17BO60830 172 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 PLA2G1BP04054 148 aaKnown RBP4.38□□□□□ -1.71
CIT-213ENST00000543324 COX6CP09669 75 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 RNASE3P12724 160 aaKnown RBP4.38□□□□□ -1.71
CIT-213ENST00000543324 ZNF22P17026 224 aaPredicted RBP4.38□□□□□ -1.71
CIT-213ENST00000543324 CXCL5P42830 114 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 UBE2DNLQ8IWF7 75 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 VSIG2Q96IQ7 327 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 ICOSQ9Y6W8 199 aa4.38□□□□□ -1.71
CIT-213ENST00000543324 TRAV12-3A0A0B4J271 114 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 TEX49A0A1B0GTD5 131 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 UQCRQO14949 82 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 MGPP08493 103 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 S100A4P26447 101 aaKnown RBP4.37□□□□□ -1.71
CIT-213ENST00000543324 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
CIT-213ENST00000543324 C5orf47Q569G3 176 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 Q6ZRN7 208 aaPredicted RBP4.37□□□□□ -1.71
CIT-213ENST00000543324 Q6ZTI0 123 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 C3orf22Q8N5N4 141 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 C14orf178Q8N769 122 aaPredicted RBP4.37□□□□□ -1.71
CIT-213ENST00000543324 LINC00526Q96FQ7 95 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 LITAFQ99732 161 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 PPDPFQ9H3Y8 114 aa4.37□□□□□ -1.71
CIT-213ENST00000543324 A0A096LPF7 62 aa4.36□□□□□ -1.71
CIT-213ENST00000543324 MT1HL1P0DM35 61 aa4.36□□□□□ -1.71
CIT-213ENST00000543324 HTN1P15515 57 aa4.36□□□□□ -1.71
CIT-213ENST00000543324 CCL18P55774 89 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms