RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 DEFB104AQ8WTQ1 72 aa5.75□□□□□ -1.49
CHD4-208ENST00000540960 PPDPFQ9H3Y8 114 aa5.75□□□□□ -1.49
CHD4-208ENST00000540960 NDUFA12Q9UI09 145 aa5.75□□□□□ -1.49
CHD4-208ENST00000540960 TRAV10A0A0B4J240 114 aa5.74□□□□□ -1.49
CHD4-208ENST00000540960 IGLV5-39A0A0G2JS06 123 aa5.74□□□□□ -1.49
CHD4-208ENST00000540960 A0A0J9YY99 117 aa5.74□□□□□ -1.49
CHD4-208ENST00000540960 NDUFA1O15239 70 aa5.74□□□□□ -1.49
CHD4-208ENST00000540960 DEFB4AO15263 64 aa5.74□□□□□ -1.49
CHD4-208ENST00000540960 HTN3P15516 51 aa5.74□□□□□ -1.49
CHD4-208ENST00000540960 RBX1P62877 108 aa5.74□□□□□ -1.49
CHD4-208ENST00000540960 FAM104AQ969W3 186 aa5.74□□□□□ -1.49
CHD4-208ENST00000540960 COX11Q9Y6N1 276 aa5.74□□□□□ -1.49
CHD4-208ENST00000540960 TRAV8-4A0A0B4J246 113 aa5.73□□□□□ -1.49
CHD4-208ENST00000540960 APOMO95445 188 aa5.73□□□□□ -1.49
CHD4-208ENST00000540960 TCTAP57738 103 aa5.73□□□□□ -1.49
CHD4-208ENST00000540960 GTF2H5Q6ZYL4 71 aa5.73□□□□□ -1.49
CHD4-208ENST00000540960 LINC00528Q8N1L1 170 aa5.73□□□□□ -1.49
CHD4-208ENST00000540960 CDKN2A-AS1Q9UH64 79 aa5.73□□□□□ -1.49
CHD4-208ENST00000540960 CELA1Q9UNI1 258 aa5.73□□□□□ -1.49
CHD4-208ENST00000540960 A0A087WZ39 114 aa5.72□□□□□ -1.49
CHD4-208ENST00000540960 DEFB131BA0A096LNP1 70 aa5.72□□□□□ -1.49
CHD4-208ENST00000540960 LINC00959A0A1B0GUT2 108 aa5.72□□□□□ -1.49
CHD4-208ENST00000540960 C9orf118A6NHY6 69 aa5.72□□□□□ -1.49
CHD4-208ENST00000540960 CXCL5P42830 114 aa5.72□□□□□ -1.49
CHD4-208ENST00000540960 A0A096LPF7 62 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 A0A1B0GV90 55 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 K7EP13 123 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 LCE2BO14633 110 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 PRSS2P07478 247 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 SPINK8P0C7L1 97 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 VAMP3Q15836 100 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 RNASE13Q5GAN3 156 aaKnown RBP5.71□□□□□ -1.5
CHD4-208ENST00000540960 CD164L2Q6UWJ8 174 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 LYPD5Q6UWN5 251 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 SPANXDQ9BXN6 97 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 SPANXCQ9NY87 97 aa5.71□□□□□ -1.5
CHD4-208ENST00000540960 IGHV3OR16-9A0A0B4J2B5 98 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 A0A1B0GWB2 263 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 KRTAP29-1A8MX34 341 aaPredicted RBP5.7□□□□□ -1.5
CHD4-208ENST00000540960 SMIM1B2RUZ4 78 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 COX7A2LO14548 114 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 CRPP02741 224 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 ANGP03950 147 aaKnown RBP5.7□□□□□ -1.5
CHD4-208ENST00000540960 FABP2P12104 132 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 XGP55808 180 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 C1orf134Q5TEV5 83 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 COX7B2Q8TF08 81 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 NACAE9PAV3 2078 aa5.7□□□□□ -1.5
CHD4-208ENST00000540960 IGLV4-60A0A075B6I1 120 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 F8WDY8 70 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 TAX1BP3O14907 124 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 IGHV3-30P01768 117 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 SMR3BP02814 79 aaPredicted RBP5.69□□□□□ -1.5
CHD4-208ENST00000540960 IGHV3-30-5P0DP03 117 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 MALP21145 153 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 KRTAP10-2P60368 255 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 REG3AQ06141 175 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 MIAQ16674 131 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 RAB37Q96AX2 223 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 TTTY13Q9BZ97 58 aa5.69□□□□□ -1.5
CHD4-208ENST00000540960 NHP2Q9NX24 153 aaKnown RBP5.69□□□□□ -1.5
CHD4-208ENST00000540960 IGHV3-64A0A075B6Q5 118 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 TRAV8-3A0A0A6YYJ7 113 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 A0A0B4J2C4 111 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 IBA57-AS1B1ANH7 110 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 SMCPP49901 116 aaPredicted RBP5.68□□□□□ -1.5
CHD4-208ENST00000540960 FXYD2P54710 66 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 CCL18P55774 89 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 TSPEAR-AS2P59090 65 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 COX6A2Q02221 97 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 C6orf226Q5I0X4 101 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 MEIG1Q5JSS6 88 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 CFAP161Q6P656 301 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 Q6ZTC4 211 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 Q8IZM0 81 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 LINC00269Q8N2A0 174 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 Q9H8V8 135 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 PRR34Q9NV39 138 aa5.68□□□□□ -1.5
CHD4-208ENST00000540960 IGKV3OR2-268A0A0C4DH90 116 aa5.67□□□□□ -1.5
CHD4-208ENST00000540960 GAGE10A6NGK3 116 aa5.67□□□□□ -1.5
CHD4-208ENST00000540960 CKS1BP61024 79 aa5.67□□□□□ -1.5
CHD4-208ENST00000540960 UBE2V1Q13404 147 aa5.67□□□□□ -1.5
CHD4-208ENST00000540960 COX17Q14061 63 aa5.67□□□□□ -1.5
CHD4-208ENST00000540960 C10orf126Q8N4M7 172 aa5.67□□□□□ -1.5
CHD4-208ENST00000540960 RMI2Q96E14 147 aa5.67□□□□□ -1.5
CHD4-208ENST00000540960 PRO1854Q9UHT4 67 aa5.67□□□□□ -1.5
CHD4-208ENST00000540960 A0A1W2PPM0 123 aa5.66□□□□□ -1.5
CHD4-208ENST00000540960 COX6CP09669 75 aa5.66□□□□□ -1.5
CHD4-208ENST00000540960 XCL1P47992 114 aa5.66□□□□□ -1.5
CHD4-208ENST00000540960 LINC01556Q5JQF7 62 aa5.66□□□□□ -1.5
CHD4-208ENST00000540960 CHCHD10Q8WYQ3 142 aaPredicted RBP5.66□□□□□ -1.5
CHD4-208ENST00000540960 ZNF625Q96I27 306 aaPredicted RBP5.66□□□□□ -1.5
CHD4-208ENST00000540960 LRP1Q07954 4544 aaKnown RBP5.65□□□□□ -1.5
CHD4-208ENST00000540960 LRP2P98164 4655 aa5.65□□□□□ -1.5
CHD4-208ENST00000540960 TRBV20-1A0A075B6N2 111 aa5.65□□□□□ -1.5
CHD4-208ENST00000540960 H3BUT2 72 aa5.65□□□□□ -1.5
CHD4-208ENST00000540960 MUSTN1Q8IVN3 82 aa5.65□□□□□ -1.5
CHD4-208ENST00000540960 TOMM7Q9P0U1 55 aa5.65□□□□□ -1.5
CHD4-208ENST00000540960 ERG28Q9UKR5 140 aa5.65□□□□□ -1.5
CHD4-208ENST00000540960 C5orf38Q86SI9 138 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms