RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 LINC00242Q5T6M2 205 aa9.87□□□□□ -0.83
TRIM65-203ENST00000540812 LINC00173Q6ZV60 143 aa9.87□□□□□ -0.83
TRIM65-203ENST00000540812 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
TRIM65-203ENST00000540812 NDUFA1O15239 70 aa9.86□□□□□ -0.83
TRIM65-203ENST00000540812 RAB5BP61020 215 aa9.86□□□□□ -0.83
TRIM65-203ENST00000540812 UNQ6190/PRO20217Q6UXQ8 127 aa9.86□□□□□ -0.83
TRIM65-203ENST00000540812 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
TRIM65-203ENST00000540812 C6orf48Q9UBA6 75 aa9.86□□□□□ -0.83
TRIM65-203ENST00000540812 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
TRIM65-203ENST00000540812 FAM19A3Q7Z5A8 133 aa9.85□□□□□ -0.83
TRIM65-203ENST00000540812 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
TRIM65-203ENST00000540812 A0A087WZ39 114 aa9.84□□□□□ -0.83
TRIM65-203ENST00000540812 F8WDY8 70 aa9.84□□□□□ -0.83
TRIM65-203ENST00000540812 TLX1NBP0CAT3 122 aa9.84□□□□□ -0.83
TRIM65-203ENST00000540812 FAM19A5Q7Z5A7 132 aaPredicted RBP9.84□□□□□ -0.83
TRIM65-203ENST00000540812 KRTAP7-1Q8IUC3 87 aa9.84□□□□□ -0.83
TRIM65-203ENST00000540812 DIRC1Q969H9 104 aa9.84□□□□□ -0.83
TRIM65-203ENST00000540812 COLCA2A8K830 154 aa9.83□□□□□ -0.84
TRIM65-203ENST00000540812 SEC11AP67812 179 aa9.83□□□□□ -0.84
TRIM65-203ENST00000540812 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
TRIM65-203ENST00000540812 LINC01561Q8N1V8 128 aa9.83□□□□□ -0.84
TRIM65-203ENST00000540812 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
TRIM65-203ENST00000540812 A0A096LNJ9 63 aa9.82□□□□□ -0.84
TRIM65-203ENST00000540812 TRGC2P03986 189 aa9.82□□□□□ -0.84
TRIM65-203ENST00000540812 KIAA0087Q14695 138 aa9.82□□□□□ -0.84
TRIM65-203ENST00000540812 H0Y9J4 135 aa9.81□□□□□ -0.84
TRIM65-203ENST00000540812 HBDP02042 147 aa9.81□□□□□ -0.84
TRIM65-203ENST00000540812 CHCHD1Q96BP2 118 aaKnown RBP9.81□□□□□ -0.84
TRIM65-203ENST00000540812 HERVK_113P63121 156 aa9.8□□□□□ -0.84
TRIM65-203ENST00000540812 CST9LQ9H4G1 147 aa9.8□□□□□ -0.84
TRIM65-203ENST00000540812 KRTAP1-4P0C5Y4 121 aa9.79□□□□□ -0.84
TRIM65-203ENST00000540812 PMVKQ15126 192 aa9.79□□□□□ -0.84
TRIM65-203ENST00000540812 MUC2Q02817 5179 aa9.79□□□□□ -0.84
TRIM65-203ENST00000540812 M0QXV9 152 aa9.78□□□□□ -0.84
TRIM65-203ENST00000540812 PMCHL1Q16048 86 aa9.78□□□□□ -0.84
TRIM65-203ENST00000540812 PDZD11Q5EBL8 140 aa9.78□□□□□ -0.84
TRIM65-203ENST00000540812 GEMIN7Q9H840 131 aaKnown RBP9.78□□□□□ -0.84
TRIM65-203ENST00000540812 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
TRIM65-203ENST00000540812 ATP5LO75964 103 aa9.77□□□□□ -0.85
TRIM65-203ENST00000540812 C2orf82Q6UX34 121 aa9.77□□□□□ -0.85
TRIM65-203ENST00000540812 SCO1O75880 301 aa9.76□□□□□ -0.85
TRIM65-203ENST00000540812 UBE2BP63146 152 aa9.76□□□□□ -0.85
TRIM65-203ENST00000540812 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
TRIM65-203ENST00000540812 BAGE3Q86Y29 109 aa9.76□□□□□ -0.85
TRIM65-203ENST00000540812 CDKN2A-AS1Q9UH64 79 aa9.76□□□□□ -0.85
TRIM65-203ENST00000540812 IGLV1-50A0A075B6I6 118 aa9.75□□□□□ -0.85
TRIM65-203ENST00000540812 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
TRIM65-203ENST00000540812 TRBV30A0A0K0K1B3 111 aa9.74□□□□□ -0.85
TRIM65-203ENST00000540812 PACRGQ96M98 296 aaPredicted RBP9.74□□□□□ -0.85
TRIM65-203ENST00000540812 NDUFC2-KCTD14E9PQ53 114 aa9.73□□□□□ -0.85
TRIM65-203ENST00000540812 HSBP1O75506 76 aa9.73□□□□□ -0.85
TRIM65-203ENST00000540812 LINC00469Q8N7U9 141 aa9.73□□□□□ -0.85
TRIM65-203ENST00000540812 PRSS2P07478 247 aa9.72□□□□□ -0.85
TRIM65-203ENST00000540812 NDUFA6P56556 154 aa9.72□□□□□ -0.85
TRIM65-203ENST00000540812 IGLC3P0DOY3 106 aa9.71□□□□□ -0.86
TRIM65-203ENST00000540812 Q8IZM0 81 aa9.71□□□□□ -0.86
TRIM65-203ENST00000540812 SMIM1B2RUZ4 78 aa9.7□□□□□ -0.86
TRIM65-203ENST00000540812 SERF1AO75920 110 aa9.7□□□□□ -0.86
TRIM65-203ENST00000540812 C6orf226Q5I0X4 101 aa9.7□□□□□ -0.86
TRIM65-203ENST00000540812 IFI27L1Q96BM0 104 aa9.7□□□□□ -0.86
TRIM65-203ENST00000540812 H3BRM9 83 aa9.69□□□□□ -0.86
TRIM65-203ENST00000540812 LINC00310P59036 64 aa9.69□□□□□ -0.86
TRIM65-203ENST00000540812 FAM19A2Q8N3H0 131 aa9.69□□□□□ -0.86
TRIM65-203ENST00000540812 TOMM7Q9P0U1 55 aa9.69□□□□□ -0.86
TRIM65-203ENST00000540812 TRAV12-1A0A0B4J245 112 aa9.68□□□□□ -0.86
TRIM65-203ENST00000540812 S100A1P23297 94 aa9.68□□□□□ -0.86
TRIM65-203ENST00000540812 CKS1BP61024 79 aa9.68□□□□□ -0.86
TRIM65-203ENST00000540812 PRR4Q16378 134 aa9.68□□□□□ -0.86
TRIM65-203ENST00000540812 ZNF861PO60384 105 aa9.67□□□□□ -0.86
TRIM65-203ENST00000540812 RPL13AP40429 203 aaKnown RBP9.67□□□□□ -0.86
TRIM65-203ENST00000540812 CXCL5P42830 114 aa9.67□□□□□ -0.86
TRIM65-203ENST00000540812 C22orf24Q9Y442 160 aa9.67□□□□□ -0.86
TRIM65-203ENST00000540812 LEPROTL1O95214 131 aa9.66□□□□□ -0.86
TRIM65-203ENST00000540812 SPINK8P0C7L1 97 aa9.66□□□□□ -0.86
TRIM65-203ENST00000540812 XAGE1AQ9HD64 81 aa9.66□□□□□ -0.86
TRIM65-203ENST00000540812 CHTOPQ9Y3Y2 248 aaKnown RBP9.66□□□□□ -0.86
TRIM65-203ENST00000540812 F8VRH5 84 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 NUPR1O60356 82 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST1H2BKO60814 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST1H2BJP06899 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 ZNF22P17026 224 aaPredicted RBP9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST1H2BOP23527 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST1H2BBP33778 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST1H2BDP58876 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST1H2BCP62807 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST2H2BEQ16778 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.65□□□□□ -0.86
TRIM65-203ENST00000540812 COX7B2Q8TF08 81 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST1H2BHQ93079 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST1H2BNQ99877 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 HIST1H2BMQ99879 126 aa9.65□□□□□ -0.86
TRIM65-203ENST00000540812 IGLV5-39A0A0G2JS06 123 aa9.64□□□□□ -0.87
TRIM65-203ENST00000540812 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
TRIM65-203ENST00000540812 HSPB8Q9UJY1 196 aa9.64□□□□□ -0.87
TRIM65-203ENST00000540812 MUC17Q685J3 4493 aa9.64□□□□□ -0.87
TRIM65-203ENST00000540812 ATP6V1G1O75348 118 aa9.62□□□□□ -0.87
TRIM65-203ENST00000540812 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
TRIM65-203ENST00000540812 TSPAN13O95857 204 aa9.61□□□□□ -0.87
TRIM65-203ENST00000540812 LBHQ53QV2 105 aaPredicted RBP9.61□□□□□ -0.87
TRIM65-203ENST00000540812 A0A087X002 238 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms