RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 KRTAP1-1Q07627 177 aa9.88□□□□□ -0.83
INO80E-203ENST00000540562 CCL18P55774 89 aa9.87□□□□□ -0.83
INO80E-203ENST00000540562 CSNK1G2-AS1Q8NCQ2 148 aa9.87□□□□□ -0.83
INO80E-203ENST00000540562 STAB1Q9NY15 2570 aa9.87□□□□□ -0.83
INO80E-203ENST00000540562 TIMM17BO60830 172 aa9.86□□□□□ -0.83
INO80E-203ENST00000540562 LRRC75A-AS1Q8N1F1 130 aa9.86□□□□□ -0.83
INO80E-203ENST00000540562 SMIM11BQ8TCY0 68 aa9.86□□□□□ -0.83
INO80E-203ENST00000540562 C14orf132Q9NPU4 83 aa9.86□□□□□ -0.83
INO80E-203ENST00000540562 LECT2O14960 151 aa9.86□□□□□ -0.83
INO80E-203ENST00000540562 SMCR5Q8TEV8 140 aa9.86□□□□□ -0.83
INO80E-203ENST00000540562 DNAL4O96015 105 aa9.85□□□□□ -0.83
INO80E-203ENST00000540562 FAM222AQ5U5X8 452 aa9.85□□□□□ -0.83
INO80E-203ENST00000540562 LINC00269Q8N2A0 174 aa9.85□□□□□ -0.83
INO80E-203ENST00000540562 FBN1P35555 2871 aaKnown RBP9.85□□□□□ -0.83
INO80E-203ENST00000540562 TRBV6-4A0A1B0GX49 114 aa9.84□□□□□ -0.83
INO80E-203ENST00000540562 IGHV3OR16-9A0A0B4J2B5 98 aa9.84□□□□□ -0.83
INO80E-203ENST00000540562 LINC00959A0A1B0GUT2 108 aa9.84□□□□□ -0.83
INO80E-203ENST00000540562 SHISA2Q6UWI4 295 aa9.84□□□□□ -0.83
INO80E-203ENST00000540562 MAST4O15021 2626 aa9.83□□□□□ -0.84
INO80E-203ENST00000540562 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
INO80E-203ENST00000540562 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
INO80E-203ENST00000540562 NCR3O14931 201 aa9.83□□□□□ -0.84
INO80E-203ENST00000540562 ANGP03950 147 aaKnown RBP9.83□□□□□ -0.84
INO80E-203ENST00000540562 TMEM86BQ8N661 226 aa9.83□□□□□ -0.84
INO80E-203ENST00000540562 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
INO80E-203ENST00000540562 F8P00451 2351 aa9.81□□□□□ -0.84
INO80E-203ENST00000540562 HERV-K104P63124 156 aa9.81□□□□□ -0.84
INO80E-203ENST00000540562 IGKV3D-7A0A0C4DH55 119 aa9.8□□□□□ -0.84
INO80E-203ENST00000540562 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
INO80E-203ENST00000540562 NBEAL1Q6ZS30 2694 aa9.79□□□□□ -0.84
INO80E-203ENST00000540562 INAFM1C9JVW0 142 aa9.79□□□□□ -0.84
INO80E-203ENST00000540562 C6orf223Q8N319 242 aa9.79□□□□□ -0.84
INO80E-203ENST00000540562 TRAV13-2A0A0B4J235 113 aa9.78□□□□□ -0.84
INO80E-203ENST00000540562 MALP21145 153 aa9.78□□□□□ -0.84
INO80E-203ENST00000540562 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
INO80E-203ENST00000540562 TENM3Q9P273 2699 aa9.78□□□□□ -0.84
INO80E-203ENST00000540562 CELA1Q9UNI1 258 aa9.77□□□□□ -0.84
INO80E-203ENST00000540562 A0A087WZ39 114 aa9.77□□□□□ -0.85
INO80E-203ENST00000540562 SS18Q15532 418 aa9.77□□□□□ -0.85
INO80E-203ENST00000540562 OVOL2Q9BRP0 275 aa9.77□□□□□ -0.85
INO80E-203ENST00000540562 M0QXV9 152 aa9.76□□□□□ -0.85
INO80E-203ENST00000540562 COPS9Q8WXC6 57 aa9.76□□□□□ -0.85
INO80E-203ENST00000540562 X6R8D5 127 aa9.76□□□□□ -0.85
INO80E-203ENST00000540562 HILS1P60008 231 aa9.76□□□□□ -0.85
INO80E-203ENST00000540562 A0A087WVE0 104 aa9.74□□□□□ -0.85
INO80E-203ENST00000540562 LY6G6DO95868 133 aa9.74□□□□□ -0.85
INO80E-203ENST00000540562 CHCHD10Q8WYQ3 142 aaPredicted RBP9.74□□□□□ -0.85
INO80E-203ENST00000540562 BAHCC1Q9P281 2608 aa9.74□□□□□ -0.85
INO80E-203ENST00000540562 WFDC9Q8NEX5 89 aa9.74□□□□□ -0.85
INO80E-203ENST00000540562 PRO0255Q9UI72 69 aa9.74□□□□□ -0.85
INO80E-203ENST00000540562 TRACP01848 142 aa9.73□□□□□ -0.85
INO80E-203ENST00000540562 RPL28P46779 137 aaKnown RBP9.73□□□□□ -0.85
INO80E-203ENST00000540562 DAD1P61803 113 aa9.73□□□□□ -0.85
INO80E-203ENST00000540562 IGHV4-28A0A0C4DH34 117 aa9.73□□□□□ -0.85
INO80E-203ENST00000540562 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
INO80E-203ENST00000540562 Q8NDZ9 215 aa9.72□□□□□ -0.85
INO80E-203ENST00000540562 KLK12Q9UKR0 248 aa9.72□□□□□ -0.85
INO80E-203ENST00000540562 COL6A5A8TX70 2615 aa9.72□□□□□ -0.85
INO80E-203ENST00000540562 FAM19A3Q7Z5A8 133 aa9.72□□□□□ -0.85
INO80E-203ENST00000540562 FAM110AQ9BQ89 295 aa9.72□□□□□ -0.85
INO80E-203ENST00000540562 REG3AQ06141 175 aa9.71□□□□□ -0.85
INO80E-203ENST00000540562 IBA57-AS1B1ANH7 110 aa9.71□□□□□ -0.85
INO80E-203ENST00000540562 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.85
INO80E-203ENST00000540562 UNQ6190/PRO20217Q6UXQ8 127 aa9.71□□□□□ -0.86
INO80E-203ENST00000540562 SMIM20Q8N5G0 67 aa9.71□□□□□ -0.86
INO80E-203ENST00000540562 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
INO80E-203ENST00000540562 C16orf95Q9H693 158 aa9.7□□□□□ -0.86
INO80E-203ENST00000540562 RETNQ9HD89 108 aa9.7□□□□□ -0.86
INO80E-203ENST00000540562 CXCL5P42830 114 aa9.69□□□□□ -0.86
INO80E-203ENST00000540562 KLK5Q9Y337 293 aaPredicted RBP9.69□□□□□ -0.86
INO80E-203ENST00000540562 J3QKU1 62 aa9.69□□□□□ -0.86
INO80E-203ENST00000540562 LINC00846Q9NV44 126 aa9.69□□□□□ -0.86
INO80E-203ENST00000540562 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
INO80E-203ENST00000540562 HIST1H4AP62805 103 aaKnown RBP9.68□□□□□ -0.86
INO80E-203ENST00000540562 RPL18AQ02543 176 aaKnown RBP9.67□□□□□ -0.86
INO80E-203ENST00000540562 S100A7L2Q5SY68 101 aa9.67□□□□□ -0.86
INO80E-203ENST00000540562 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
INO80E-203ENST00000540562 FAM240AA0A1B0GVK7 77 aa9.67□□□□□ -0.86
INO80E-203ENST00000540562 HIGD2BQ4VC39 106 aa9.67□□□□□ -0.86
INO80E-203ENST00000540562 INAFM2P0DMQ5 153 aa9.65□□□□□ -0.86
INO80E-203ENST00000540562 KIR2DL5BQ8NHK3 375 aa9.65□□□□□ -0.86
INO80E-203ENST00000540562 LINC00643Q86TS7 51 aa9.64□□□□□ -0.87
INO80E-203ENST00000540562 SPAG11BQ08648 103 aa9.64□□□□□ -0.87
INO80E-203ENST00000540562 OXLD1Q5BKU9 147 aa9.64□□□□□ -0.87
INO80E-203ENST00000540562 ORMDL1Q9P0S3 153 aa9.64□□□□□ -0.87
INO80E-203ENST00000540562 NANOS2P60321 138 aaKnown RBP9.63□□□□□ -0.87
INO80E-203ENST00000540562 Q6Q795 121 aa9.63□□□□□ -0.87
INO80E-203ENST00000540562 LINC01600Q96MT4 127 aa9.63□□□□□ -0.87
INO80E-203ENST00000540562 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
INO80E-203ENST00000540562 Q8IZM0 81 aa9.63□□□□□ -0.87
INO80E-203ENST00000540562 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
INO80E-203ENST00000540562 TRBV7-7A0A0K0K1E9 115 aa9.62□□□□□ -0.87
INO80E-203ENST00000540562 CD164L2Q6UWJ8 174 aa9.62□□□□□ -0.87
INO80E-203ENST00000540562 CYSRT1A8MQ03 144 aa9.62□□□□□ -0.87
INO80E-203ENST00000540562 H0YGX0 51 aa9.62□□□□□ -0.87
INO80E-203ENST00000540562 ACYP1P07311 99 aa9.61□□□□□ -0.87
INO80E-203ENST00000540562 IGHV4-30-4P0DP06 118 aa9.6□□□□□ -0.87
INO80E-203ENST00000540562 KMT2BQ9UMN6 2715 aaPredicted RBP9.6□□□□□ -0.87
INO80E-203ENST00000540562 A0A1B0GUV1 79 aa9.6□□□□□ -0.87
INO80E-203ENST00000540562 MRPL23Q16540 153 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms