RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-206ENST00000540250 MYMXA0A1B0GTQ4 84 aa5.33□□□□□ -1.56
LINC00943-206ENST00000540250 LGALS3P17931 250 aaKnown RBP5.33□□□□□ -1.56
LINC00943-206ENST00000540250 TSPEAR-AS2P59090 65 aa5.33□□□□□ -1.56
LINC00943-206ENST00000540250 CD164L2Q6UWJ8 174 aa5.33□□□□□ -1.56
LINC00943-206ENST00000540250 PLEKHB2Q96CS7 222 aa5.33□□□□□ -1.56
LINC00943-206ENST00000540250 CDKN2A-AS1Q9UH64 79 aa5.33□□□□□ -1.56
LINC00943-206ENST00000540250 TRAV8-3A0A0A6YYJ7 113 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 IGHV1-58A0A0C4DH39 117 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 LINC00959A0A1B0GUT2 108 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 ZNF815PA8K554 130 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 J3QQQ9 107 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 M0R143 59 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 CCL25O15444 150 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 ANGP03950 147 aaKnown RBP5.32□□□□□ -1.56
LINC00943-206ENST00000540250 SPINK8P0C7L1 97 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 IGHV3-30-3P0DP02 117 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 HIGD1BQ9P298 99 aa5.32□□□□□ -1.56
LINC00943-206ENST00000540250 REG3AQ06141 175 aa5.31□□□□□ -1.56
LINC00943-206ENST00000540250 SS18Q15532 418 aa5.31□□□□□ -1.56
LINC00943-206ENST00000540250 ESRGQ1W209 222 aa5.31□□□□□ -1.56
LINC00943-206ENST00000540250 CLPSL2Q6UWE3 100 aa5.31□□□□□ -1.56
LINC00943-206ENST00000540250 WFDC10BQ8IUB3 73 aa5.31□□□□□ -1.56
LINC00943-206ENST00000540250 LINC00269Q8N2A0 174 aa5.31□□□□□ -1.56
LINC00943-206ENST00000540250 SNHG12Q9BXW3 62 aa5.31□□□□□ -1.56
LINC00943-206ENST00000540250 SMIM1B2RUZ4 78 aa5.3□□□□□ -1.56
LINC00943-206ENST00000540250 IGLL5B9A064 214 aa5.3□□□□□ -1.56
LINC00943-206ENST00000540250 HINT1P49773 126 aaPredicted RBP5.3□□□□□ -1.56
LINC00943-206ENST00000540250 HSD52Q0P140 79 aa5.3□□□□□ -1.56
LINC00943-206ENST00000540250 IGHV3OR16-9A0A0B4J2B5 98 aa5.29□□□□□ -1.56
LINC00943-206ENST00000540250 IGHV3-30P01768 117 aa5.29□□□□□ -1.56
LINC00943-206ENST00000540250 IGHV3-33P01772 117 aa5.29□□□□□ -1.56
LINC00943-206ENST00000540250 IGHV3-30-5P0DP03 117 aa5.29□□□□□ -1.56
LINC00943-206ENST00000540250 BATFQ16520 125 aa5.29□□□□□ -1.56
LINC00943-206ENST00000540250 ZFAND6Q6FIF0 208 aa5.29□□□□□ -1.56
LINC00943-206ENST00000540250 SCGB1D4Q6XE38 83 aa5.29□□□□□ -1.56
LINC00943-206ENST00000540250 PRR34Q9NV39 138 aa5.29□□□□□ -1.56
LINC00943-206ENST00000540250 KLK12Q9UKR0 248 aa5.29□□□□□ -1.56
LINC00943-206ENST00000540250 A0A087WZ39 114 aa5.28□□□□□ -1.56
LINC00943-206ENST00000540250 CRPP02741 224 aa5.28□□□□□ -1.56
LINC00943-206ENST00000540250 XCL1P47992 114 aa5.28□□□□□ -1.56
LINC00943-206ENST00000540250 TAL2Q16559 108 aa5.28□□□□□ -1.56
LINC00943-206ENST00000540250 LINC01556Q5JQF7 62 aa5.28□□□□□ -1.56
LINC00943-206ENST00000540250 BVES-AS1Q5T3Y7 98 aa5.28□□□□□ -1.56
LINC00943-206ENST00000540250 LINC01561Q8N1V8 128 aa5.28□□□□□ -1.56
LINC00943-206ENST00000540250 CHCHD10Q8WYQ3 142 aaPredicted RBP5.28□□□□□ -1.56
LINC00943-206ENST00000540250 NDUFA12Q9UI09 145 aa5.28□□□□□ -1.56
LINC00943-206ENST00000540250 IGLV10-54A0A075B6I4 117 aa5.27□□□□□ -1.57
LINC00943-206ENST00000540250 NDUFA1O15239 70 aa5.27□□□□□ -1.57
LINC00943-206ENST00000540250 DNAH10OSP0CZ25 163 aa5.27□□□□□ -1.57
LINC00943-206ENST00000540250 CCL18P55774 89 aa5.27□□□□□ -1.57
LINC00943-206ENST00000540250 SRSF9Q13242 221 aaKnown RBP eCLIP5.27□□□□□ -1.57
LINC00943-206ENST00000540250 ENHOQ6UWT2 76 aa5.27□□□□□ -1.57
LINC00943-206ENST00000540250 C5orf38Q86SI9 138 aa5.27□□□□□ -1.57
LINC00943-206ENST00000540250 C10orf126Q8N4M7 172 aa5.27□□□□□ -1.57
LINC00943-206ENST00000540250 HIST1H4GQ99525 98 aa5.27□□□□□ -1.57
LINC00943-206ENST00000540250 LINC00588Q9Y4M8 146 aa5.27□□□□□ -1.57
LINC00943-206ENST00000540250 HUWE1Q7Z6Z7 4374 aaKnown RBP5.26□□□□□ -1.57
LINC00943-206ENST00000540250 TRAV8-4A0A0B4J246 113 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 A0A0U1RRA0 63 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 NUPR2A6NF83 97 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 COX7A2LO14548 114 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 KRTAP10-5P60370 271 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 MIAQ16674 131 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 COL5A1-AS1Q5SY13 56 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 CEND1Q8N111 149 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 COX7B2Q8TF08 81 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 ORAOV1Q8WV07 137 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 UBE2WQ96B02 151 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 UPK3BQ9BT76 320 aa5.26□□□□□ -1.57
LINC00943-206ENST00000540250 SPANXB1Q9NS25 103 aaPredicted RBP5.26□□□□□ -1.57
LINC00943-206ENST00000540250 TMEM238C9JI98 176 aa5.25□□□□□ -1.57
LINC00943-206ENST00000540250 SMIM29Q86T20 159 aa5.25□□□□□ -1.57
LINC00943-206ENST00000540250 ZNF625Q96I27 306 aaPredicted RBP5.25□□□□□ -1.57
LINC00943-206ENST00000540250 TOMM7Q9P0U1 55 aa5.25□□□□□ -1.57
LINC00943-206ENST00000540250 APLNQ9ULZ1 77 aa5.25□□□□□ -1.57
LINC00943-206ENST00000540250 A6NDN8 102 aa5.24□□□□□ -1.57
LINC00943-206ENST00000540250 TIMM17BO60830 172 aa5.24□□□□□ -1.57
LINC00943-206ENST00000540250 FXYD2P54710 66 aa5.24□□□□□ -1.57
LINC00943-206ENST00000540250 HERV-K104P63124 156 aa5.24□□□□□ -1.57
LINC00943-206ENST00000540250 SFTA2Q6UW10 78 aa5.24□□□□□ -1.57
LINC00943-206ENST00000540250 Q8IZM0 81 aa5.24□□□□□ -1.57
LINC00943-206ENST00000540250 LITAFQ99732 161 aa5.24□□□□□ -1.57
LINC00943-206ENST00000540250 KLK5Q9Y337 293 aaPredicted RBP5.24□□□□□ -1.57
LINC00943-206ENST00000540250 APOMO95445 188 aa5.23□□□□□ -1.57
LINC00943-206ENST00000540250 SPANXDQ9BXN6 97 aa5.23□□□□□ -1.57
LINC00943-206ENST00000540250 SPANXCQ9NY87 97 aa5.23□□□□□ -1.57
LINC00943-206ENST00000540250 COL7A1Q02388 2944 aa5.23□□□□□ -1.57
LINC00943-206ENST00000540250 IBA57-AS1B1ANH7 110 aa5.22□□□□□ -1.57
LINC00943-206ENST00000540250 CXCL5P42830 114 aa5.22□□□□□ -1.57
LINC00943-206ENST00000540250 CIRBPQ14011 172 aaKnown RBP5.22□□□□□ -1.57
LINC00943-206ENST00000540250 C6orf226Q5I0X4 101 aa5.22□□□□□ -1.57
LINC00943-206ENST00000540250 MEIG1Q5JSS6 88 aa5.22□□□□□ -1.57
LINC00943-206ENST00000540250 KRTAP26-1Q6PEX3 210 aa5.22□□□□□ -1.57
LINC00943-206ENST00000540250 Q6ZVH6 145 aa5.22□□□□□ -1.57
LINC00943-206ENST00000540250 UBE2DNLQ8IWF7 75 aa5.22□□□□□ -1.57
LINC00943-206ENST00000540250 MEGF8Q7Z7M0 2845 aa5.21□□□□□ -1.57
LINC00943-206ENST00000540250 K7EP13 123 aa5.21□□□□□ -1.58
LINC00943-206ENST00000540250 LINC01547P58512 204 aaPredicted RBP5.21□□□□□ -1.58
LINC00943-206ENST00000540250 KIAA0087Q14695 138 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms