RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 MALP21145 153 aa6.99□□□□□ -1.29
SPARC-209ENST00000539687 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
SPARC-209ENST00000539687 C5orf38Q86SI9 138 aa6.99□□□□□ -1.29
SPARC-209ENST00000539687 CHCHD10Q8WYQ3 142 aaPredicted RBP6.99□□□□□ -1.29
SPARC-209ENST00000539687 RETNQ9HD89 108 aa6.99□□□□□ -1.29
SPARC-209ENST00000539687 PRR34Q9NV39 138 aa6.99□□□□□ -1.29
SPARC-209ENST00000539687 DEFB131BA0A096LNP1 70 aa6.98□□□□□ -1.29
SPARC-209ENST00000539687 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
SPARC-209ENST00000539687 TRAV10A0A0B4J240 114 aa6.98□□□□□ -1.29
SPARC-209ENST00000539687 CKS1BP61024 79 aa6.98□□□□□ -1.29
SPARC-209ENST00000539687 COX17Q14061 63 aa6.98□□□□□ -1.29
SPARC-209ENST00000539687 ATXN8Q156A1 80 aa6.98□□□□□ -1.29
SPARC-209ENST00000539687 C15orf53Q8NAA6 179 aa6.98□□□□□ -1.29
SPARC-209ENST00000539687 A0A0J9YWU9 116 aa6.97□□□□□ -1.29
SPARC-209ENST00000539687 H3BMG7 143 aa6.97□□□□□ -1.29
SPARC-209ENST00000539687 OCIAD2Q56VL3 154 aa6.97□□□□□ -1.29
SPARC-209ENST00000539687 Q6ZTC4 211 aa6.97□□□□□ -1.29
SPARC-209ENST00000539687 TM2D3Q9BRN9 247 aa6.97□□□□□ -1.29
SPARC-209ENST00000539687 M0QXV9 152 aa6.96□□□□□ -1.3
SPARC-209ENST00000539687 LINC00158P58513 81 aa6.96□□□□□ -1.3
SPARC-209ENST00000539687 KLK5Q9Y337 293 aaPredicted RBP6.96□□□□□ -1.3
SPARC-209ENST00000539687 RPL13AP40429 203 aaKnown RBP6.95□□□□□ -1.3
SPARC-209ENST00000539687 CLPSL2Q6UWE3 100 aa6.95□□□□□ -1.3
SPARC-209ENST00000539687 MIR7-3HGQ8N6C7 128 aa6.95□□□□□ -1.3
SPARC-209ENST00000539687 H7C2G1 150 aa6.94□□□□□ -1.3
SPARC-209ENST00000539687 NPC2P61916 151 aa6.94□□□□□ -1.3
SPARC-209ENST00000539687 FOXI1Q12951 378 aa6.94□□□□□ -1.3
SPARC-209ENST00000539687 SND1-IT1Q9HBX3 110 aa6.94□□□□□ -1.3
SPARC-209ENST00000539687 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
SPARC-209ENST00000539687 TGP01266 2768 aa6.94□□□□□ -1.3
SPARC-209ENST00000539687 NOTCH3Q9UM47 2321 aa6.94□□□□□ -1.3
SPARC-209ENST00000539687 GAGE12HA6NDE8 117 aa6.93□□□□□ -1.3
SPARC-209ENST00000539687 F8WDY8 70 aa6.93□□□□□ -1.3
SPARC-209ENST00000539687 TCL1BO95988 128 aa6.93□□□□□ -1.3
SPARC-209ENST00000539687 NANOS2P60321 138 aaKnown RBP6.93□□□□□ -1.3
SPARC-209ENST00000539687 LINC01556Q5JQF7 62 aa6.93□□□□□ -1.3
SPARC-209ENST00000539687 DAND5Q8N907 189 aa6.93□□□□□ -1.3
SPARC-209ENST00000539687 PRO0461Q9UI25 63 aa6.93□□□□□ -1.3
SPARC-209ENST00000539687 A0A0U1RRA0 63 aa6.92□□□□□ -1.3
SPARC-209ENST00000539687 K7EIL1 84 aa6.92□□□□□ -1.3
SPARC-209ENST00000539687 TRIAP1O43715 76 aa6.92□□□□□ -1.3
SPARC-209ENST00000539687 EIF4EBP3O60516 100 aaPredicted RBP6.92□□□□□ -1.3
SPARC-209ENST00000539687 SPAG11BQ08648 103 aa6.92□□□□□ -1.3
SPARC-209ENST00000539687 DEFB121Q5J5C9 76 aa6.92□□□□□ -1.3
SPARC-209ENST00000539687 NDUFC2O95298 119 aa6.91□□□□□ -1.3
SPARC-209ENST00000539687 KIAA0087Q14695 138 aa6.91□□□□□ -1.3
SPARC-209ENST00000539687 ENHOQ6UWT2 76 aa6.91□□□□□ -1.3
SPARC-209ENST00000539687 SOSTDC1Q6X4U4 206 aa6.91□□□□□ -1.3
SPARC-209ENST00000539687 UBE2WQ96B02 151 aa6.91□□□□□ -1.3
SPARC-209ENST00000539687 LINC01600Q96MT4 127 aa6.91□□□□□ -1.3
SPARC-209ENST00000539687 CBY1Q9Y3M2 126 aa6.91□□□□□ -1.3
SPARC-209ENST00000539687 IGLV10-54A0A075B6I4 117 aa6.9□□□□□ -1.3
SPARC-209ENST00000539687 GVQW2A0A096LPI5 108 aaPredicted RBP6.9□□□□□ -1.3
SPARC-209ENST00000539687 H3BT86 120 aa6.9□□□□□ -1.3
SPARC-209ENST00000539687 PFN2P35080 140 aa6.9□□□□□ -1.3
SPARC-209ENST00000539687 WFDC2Q14508 124 aa6.9□□□□□ -1.3
SPARC-209ENST00000539687 LINC01620Q4KN68 170 aa6.9□□□□□ -1.3
SPARC-209ENST00000539687 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.31
SPARC-209ENST00000539687 TRBV10-2A0A0K0K1G8 114 aa6.89□□□□□ -1.31
SPARC-209ENST00000539687 SLC25A20O43772 301 aa6.89□□□□□ -1.31
SPARC-209ENST00000539687 DNAH10OSP0CZ25 163 aa6.89□□□□□ -1.31
SPARC-209ENST00000539687 RPL28P46779 137 aaKnown RBP6.89□□□□□ -1.31
SPARC-209ENST00000539687 CCL18P55774 89 aa6.89□□□□□ -1.31
SPARC-209ENST00000539687 ESRGQ1W209 222 aa6.89□□□□□ -1.31
SPARC-209ENST00000539687 WFDC10BQ8IUB3 73 aa6.89□□□□□ -1.31
SPARC-209ENST00000539687 RMI2Q96E14 147 aa6.89□□□□□ -1.31
SPARC-209ENST00000539687 CARD19Q96LW7 228 aa6.89□□□□□ -1.31
SPARC-209ENST00000539687 C1orf43Q9BWL3 253 aa6.89□□□□□ -1.31
SPARC-209ENST00000539687 C9JAW5 83 aa6.88□□□□□ -1.31
SPARC-209ENST00000539687 H0YGX0 51 aa6.88□□□□□ -1.31
SPARC-209ENST00000539687 LST1O00453 97 aa6.88□□□□□ -1.31
SPARC-209ENST00000539687 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
SPARC-209ENST00000539687 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
SPARC-209ENST00000539687 TRACP01848 142 aa6.87□□□□□ -1.31
SPARC-209ENST00000539687 ETDBQ3ZM63 59 aa6.87□□□□□ -1.31
SPARC-209ENST00000539687 Q8N3U1 123 aa6.87□□□□□ -1.31
SPARC-209ENST00000539687 ANKRD29Q8N6D5 301 aa6.87□□□□□ -1.31
SPARC-209ENST00000539687 PPDPFLQ8WWR9 84 aa6.87□□□□□ -1.31
SPARC-209ENST00000539687 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
SPARC-209ENST00000539687 VPS25Q9BRG1 176 aa6.87□□□□□ -1.31
SPARC-209ENST00000539687 PKD1L1Q8TDX9 2849 aa6.86□□□□□ -1.31
SPARC-209ENST00000539687 C2orf82Q6UX34 121 aa6.86□□□□□ -1.31
SPARC-209ENST00000539687 MRAPQ8TCY5 172 aa6.86□□□□□ -1.31
SPARC-209ENST00000539687 NTN5Q8WTR8 489 aaPredicted RBP6.86□□□□□ -1.31
SPARC-209ENST00000539687 UPK3BQ9BT76 320 aa6.86□□□□□ -1.31
SPARC-209ENST00000539687 VWFP04275 2813 aa6.85□□□□□ -1.31
SPARC-209ENST00000539687 SNCGO76070 127 aa6.85□□□□□ -1.31
SPARC-209ENST00000539687 RNF151Q2KHN1 245 aa6.85□□□□□ -1.31
SPARC-209ENST00000539687 B9D2Q9BPU9 175 aa6.85□□□□□ -1.31
SPARC-209ENST00000539687 TMEM126AQ9H061 195 aa6.85□□□□□ -1.31
SPARC-209ENST00000539687 MGAM2Q2M2H8 2515 aa6.85□□□□□ -1.31
SPARC-209ENST00000539687 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.31
SPARC-209ENST00000539687 IGKV2D-28P01615 120 aa6.84□□□□□ -1.31
SPARC-209ENST00000539687 NHLRC4P0CG21 123 aaPredicted RBP6.84□□□□□ -1.31
SPARC-209ENST00000539687 A0A1B0GX51 115 aa6.83□□□□□ -1.32
SPARC-209ENST00000539687 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
SPARC-209ENST00000539687 OR13C6PQ8NH95 151 aa6.83□□□□□ -1.32
SPARC-209ENST00000539687 CAMK2N2Q96S95 79 aa6.83□□□□□ -1.32
SPARC-209ENST00000539687 TRRAPQ9Y4A5 3859 aa6.83□□□□□ -1.32
SPARC-209ENST00000539687 DNAL4O96015 105 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms