RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 GAGE2DQ9UEU5 116 aa10.24□□□□□ -0.77
CDCA3-207ENST00000538862 TRGV4A0A0C4DH28 118 aa10.23□□□□□ -0.77
CDCA3-207ENST00000538862 LOC100131303A0A0U1RQF7 123 aa10.23□□□□□ -0.77
CDCA3-207ENST00000538862 A0A0U1RRA0 63 aa10.23□□□□□ -0.77
CDCA3-207ENST00000538862 A0A1B0GX51 115 aa10.23□□□□□ -0.77
CDCA3-207ENST00000538862 COX7A2LO14548 114 aa10.23□□□□□ -0.77
CDCA3-207ENST00000538862 PRB2P02812 416 aaPredicted RBP10.22□□□□□ -0.77
CDCA3-207ENST00000538862 FHL2Q14192 279 aa10.22□□□□□ -0.77
CDCA3-207ENST00000538862 TGP01266 2768 aa10.22□□□□□ -0.77
CDCA3-207ENST00000538862 DNAH3Q8TD57 4116 aa10.21□□□□□ -0.77
CDCA3-207ENST00000538862 J3KT08 172 aa10.21□□□□□ -0.77
CDCA3-207ENST00000538862 TRBV6-8A0A0A6YYG3 113 aa10.21□□□□□ -0.78
CDCA3-207ENST00000538862 SNCGO76070 127 aa10.2□□□□□ -0.78
CDCA3-207ENST00000538862 COX7B2Q8TF08 81 aa10.2□□□□□ -0.78
CDCA3-207ENST00000538862 FAM240AA0A1B0GVK7 77 aa10.19□□□□□ -0.78
CDCA3-207ENST00000538862 LINC00482Q8N8I6 264 aa10.19□□□□□ -0.78
CDCA3-207ENST00000538862 WFDC9Q8NEX5 89 aa10.19□□□□□ -0.78
CDCA3-207ENST00000538862 MRPL23Q16540 153 aaKnown RBP10.18□□□□□ -0.78
CDCA3-207ENST00000538862 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
CDCA3-207ENST00000538862 TRACP01848 142 aa10.17□□□□□ -0.78
CDCA3-207ENST00000538862 FAM222AQ5U5X8 452 aa10.17□□□□□ -0.78
CDCA3-207ENST00000538862 KIR2DL5BQ8NHK3 375 aa10.17□□□□□ -0.78
CDCA3-207ENST00000538862 IGLV4-60A0A075B6I1 120 aa10.17□□□□□ -0.78
CDCA3-207ENST00000538862 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
CDCA3-207ENST00000538862 RPS28P62857 69 aaKnown RBP10.17□□□□□ -0.78
CDCA3-207ENST00000538862 CHCHD5Q9BSY4 110 aa10.17□□□□□ -0.78
CDCA3-207ENST00000538862 KPRPQ5T749 579 aaPredicted RBP10.15□□□□□ -0.78
CDCA3-207ENST00000538862 LINC00612Q8N6U2 182 aa10.15□□□□□ -0.78
CDCA3-207ENST00000538862 C15orf53Q8NAA6 179 aa10.15□□□□□ -0.78
CDCA3-207ENST00000538862 A0A087WZ39 114 aa10.15□□□□□ -0.79
CDCA3-207ENST00000538862 RPL28P46779 137 aaKnown RBP10.15□□□□□ -0.79
CDCA3-207ENST00000538862 MIR7-3HGQ8N6C7 128 aa10.15□□□□□ -0.79
CDCA3-207ENST00000538862 TOMM7Q9P0U1 55 aa10.14□□□□□ -0.79
CDCA3-207ENST00000538862 FAM19A5Q7Z5A7 132 aaPredicted RBP10.13□□□□□ -0.79
CDCA3-207ENST00000538862 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
CDCA3-207ENST00000538862 IBA57-AS1B1ANH7 110 aa10.13□□□□□ -0.79
CDCA3-207ENST00000538862 CRPP02741 224 aa10.13□□□□□ -0.79
CDCA3-207ENST00000538862 ACYP1P07311 99 aa10.13□□□□□ -0.79
CDCA3-207ENST00000538862 KRTAP10-11P60412 298 aa10.12□□□□□ -0.79
CDCA3-207ENST00000538862 SND1-IT1Q9HBX3 110 aa10.12□□□□□ -0.79
CDCA3-207ENST00000538862 DEFB130BP0DP73 79 aa10.11□□□□□ -0.79
CDCA3-207ENST00000538862 DEFB130AP0DP74 79 aa10.11□□□□□ -0.79
CDCA3-207ENST00000538862 IGKV2-28A0A075B6P5 120 aa10.11□□□□□ -0.79
CDCA3-207ENST00000538862 LINC00959A0A1B0GUT2 108 aa10.11□□□□□ -0.79
CDCA3-207ENST00000538862 A0A1B0GUV1 79 aa10.11□□□□□ -0.79
CDCA3-207ENST00000538862 IGKV2D-28P01615 120 aa10.11□□□□□ -0.79
CDCA3-207ENST00000538862 BAALC-AS2P0C853 105 aa10.11□□□□□ -0.79
CDCA3-207ENST00000538862 LINC00158P58513 81 aa10.11□□□□□ -0.79
CDCA3-207ENST00000538862 LINC00337Q8N6G1 96 aa10.11□□□□□ -0.79
CDCA3-207ENST00000538862 GYPEP15421 78 aa10.09□□□□□ -0.79
CDCA3-207ENST00000538862 CCL18P55774 89 aa10.09□□□□□ -0.79
CDCA3-207ENST00000538862 C5orf38Q86SI9 138 aa10.09□□□□□ -0.79
CDCA3-207ENST00000538862 FAM218AQ96MZ4 157 aa10.09□□□□□ -0.79
CDCA3-207ENST00000538862 X6R8D5 127 aa10.08□□□□□ -0.8
CDCA3-207ENST00000538862 SS18Q15532 418 aa10.07□□□□□ -0.8
CDCA3-207ENST00000538862 LINC01561Q8N1V8 128 aa10.07□□□□□ -0.8
CDCA3-207ENST00000538862 PRO0255Q9UI72 69 aa10.07□□□□□ -0.8
CDCA3-207ENST00000538862 H0YGX0 51 aa10.07□□□□□ -0.8
CDCA3-207ENST00000538862 EGFEM1PQ0D2K5 195 aa10.07□□□□□ -0.8
CDCA3-207ENST00000538862 K7EIL1 84 aa10.06□□□□□ -0.8
CDCA3-207ENST00000538862 C6orf226Q5I0X4 101 aa10.06□□□□□ -0.8
CDCA3-207ENST00000538862 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
CDCA3-207ENST00000538862 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
CDCA3-207ENST00000538862 TRBV7-7A0A0K0K1E9 115 aa10.05□□□□□ -0.8
CDCA3-207ENST00000538862 C9orf66Q5T8R8 295 aa10.05□□□□□ -0.8
CDCA3-207ENST00000538862 Q8IZM0 81 aa10.05□□□□□ -0.8
CDCA3-207ENST00000538862 LYRM9A8MSI8 78 aa10.04□□□□□ -0.8
CDCA3-207ENST00000538862 INAFM2P0DMQ5 153 aa10.04□□□□□ -0.8
CDCA3-207ENST00000538862 MALP21145 153 aa10.04□□□□□ -0.8
CDCA3-207ENST00000538862 PFN2P35080 140 aa10.04□□□□□ -0.8
CDCA3-207ENST00000538862 XCL1P47992 114 aa10.03□□□□□ -0.8
CDCA3-207ENST00000538862 IMUPQ9GZP8 106 aa10.03□□□□□ -0.8
CDCA3-207ENST00000538862 PAX4O43316 350 aa10.02□□□□□ -0.81
CDCA3-207ENST00000538862 SDIM1Q6ZPB5 146 aa10.02□□□□□ -0.81
CDCA3-207ENST00000538862 LOC107984640A0A0U1RRK4 108 aa10.01□□□□□ -0.81
CDCA3-207ENST00000538862 DNAL4O96015 105 aa10.01□□□□□ -0.81
CDCA3-207ENST00000538862 Q9HAA7 133 aa10.01□□□□□ -0.81
CDCA3-207ENST00000538862 COL7A1Q02388 2944 aa10.01□□□□□ -0.81
CDCA3-207ENST00000538862 LINC00643Q86TS7 51 aa10□□□□□ -0.81
CDCA3-207ENST00000538862 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
CDCA3-207ENST00000538862 A0A087WYN8 130 aa9.99□□□□□ -0.81
CDCA3-207ENST00000538862 UQCRQO14949 82 aa9.99□□□□□ -0.81
CDCA3-207ENST00000538862 ATP5G1P05496 136 aa9.99□□□□□ -0.81
CDCA3-207ENST00000538862 C9orf153Q5TBE3 101 aa9.99□□□□□ -0.81
CDCA3-207ENST00000538862 DNAH9Q9NYC9 4486 aa9.99□□□□□ -0.81
CDCA3-207ENST00000538862 CD164L2Q6UWJ8 174 aa9.99□□□□□ -0.81
CDCA3-207ENST00000538862 CXCL5P42830 114 aa9.98□□□□□ -0.81
CDCA3-207ENST00000538862 COX17Q14061 63 aa9.98□□□□□ -0.81
CDCA3-207ENST00000538862 LINC00526Q96FQ7 95 aa9.98□□□□□ -0.81
CDCA3-207ENST00000538862 C11orf68Q9H3H3 251 aaKnown RBP9.98□□□□□ -0.81
CDCA3-207ENST00000538862 A0A096LPF7 62 aa9.97□□□□□ -0.81
CDCA3-207ENST00000538862 APOC4P55056 127 aa9.97□□□□□ -0.81
CDCA3-207ENST00000538862 SEC61GP60059 68 aa9.97□□□□□ -0.81
CDCA3-207ENST00000538862 CLPSL2Q6UWE3 100 aa9.97□□□□□ -0.81
CDCA3-207ENST00000538862 SMCR5Q8TEV8 140 aa9.97□□□□□ -0.81
CDCA3-207ENST00000538862 KIAA0087Q14695 138 aa9.96□□□□□ -0.81
CDCA3-207ENST00000538862 LINC00269Q8N2A0 174 aa9.96□□□□□ -0.81
CDCA3-207ENST00000538862 OBSCN-AS1Q96MR7 158 aa9.96□□□□□ -0.81
CDCA3-207ENST00000538862 PRO0628Q9UI54 55 aa9.96□□□□□ -0.81
CDCA3-207ENST00000538862 NDUFC2O95298 119 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms