RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 HCFC1P51610 2035 aa12.01□□□□□ -0.49
SCARB1-205ENST00000538291 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
SCARB1-205ENST00000538291 COX6A2Q02221 97 aa12□□□□□ -0.49
SCARB1-205ENST00000538291 A6NED7 52 aa12□□□□□ -0.49
SCARB1-205ENST00000538291 ZFYVE26Q68DK2 2539 aa12□□□□□ -0.49
SCARB1-205ENST00000538291 BEAN1Q3B7T3 259 aa11.99□□□□□ -0.49
SCARB1-205ENST00000538291 C2orf48Q96LS8 159 aa11.99□□□□□ -0.49
SCARB1-205ENST00000538291 LYPD5Q6UWN5 251 aa11.99□□□□□ -0.49
SCARB1-205ENST00000538291 CELA1Q9UNI1 258 aa11.98□□□□□ -0.49
SCARB1-205ENST00000538291 A0A1B0GUV1 79 aa11.98□□□□□ -0.49
SCARB1-205ENST00000538291 IGHV6-1A0A0B4J1U7 121 aa11.97□□□□□ -0.49
SCARB1-205ENST00000538291 Q9BRP9 147 aa11.97□□□□□ -0.49
SCARB1-205ENST00000538291 PRR3P79522 188 aaKnown RBP11.97□□□□□ -0.49
SCARB1-205ENST00000538291 ABCA12Q86UK0 2595 aa11.97□□□□□ -0.49
SCARB1-205ENST00000538291 COX7CP15954 63 aa11.96□□□□□ -0.5
SCARB1-205ENST00000538291 AMELXQ99217 191 aa11.95□□□□□ -0.5
SCARB1-205ENST00000538291 PRYO14603 147 aa11.95□□□□□ -0.5
SCARB1-205ENST00000538291 LINC00208Q96KT6 92 aa11.94□□□□□ -0.5
SCARB1-205ENST00000538291 COX8CQ7Z4L0 72 aa11.93□□□□□ -0.5
SCARB1-205ENST00000538291 A0A0U1RQV1 116 aa11.91□□□□□ -0.5
SCARB1-205ENST00000538291 LRP4O75096 1905 aa11.91□□□□□ -0.5
SCARB1-205ENST00000538291 FHL3Q13643 280 aa11.91□□□□□ -0.5
SCARB1-205ENST00000538291 Q6ZSN1 163 aa11.91□□□□□ -0.5
SCARB1-205ENST00000538291 A0A087WYN8 130 aa11.91□□□□□ -0.5
SCARB1-205ENST00000538291 LINC01561Q8N1V8 128 aa11.9□□□□□ -0.5
SCARB1-205ENST00000538291 TSPEAR-AS2P59090 65 aa11.9□□□□□ -0.5
SCARB1-205ENST00000538291 URB1-AS1Q96HZ7 61 aa11.9□□□□□ -0.51
SCARB1-205ENST00000538291 LINC01547P58512 204 aaPredicted RBP11.89□□□□□ -0.51
SCARB1-205ENST00000538291 A0A087WSZ3 146 aa11.89□□□□□ -0.51
SCARB1-205ENST00000538291 TRAV7A0A075B6U4 112 aa11.89□□□□□ -0.51
SCARB1-205ENST00000538291 COL5A1P20908 1838 aaPredicted RBP11.89□□□□□ -0.51
SCARB1-205ENST00000538291 XGP55808 180 aa11.88□□□□□ -0.51
SCARB1-205ENST00000538291 ADAMTSL4-AS1Q5T5F5 129 aa11.88□□□□□ -0.51
SCARB1-205ENST00000538291 Q8N2B8 174 aa11.88□□□□□ -0.51
SCARB1-205ENST00000538291 LIMD2Q9BT23 127 aa11.87□□□□□ -0.51
SCARB1-205ENST00000538291 X6R8D5 127 aa11.87□□□□□ -0.51
SCARB1-205ENST00000538291 FN1P02751 2386 aaKnown RBP11.87□□□□□ -0.51
SCARB1-205ENST00000538291 Q6ZRU5 148 aa11.87□□□□□ -0.51
SCARB1-205ENST00000538291 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
SCARB1-205ENST00000538291 TLN2Q9Y4G6 2542 aa11.87□□□□□ -0.51
SCARB1-205ENST00000538291 TRBV7-6A0A0J9YX20 115 aa11.87□□□□□ -0.51
SCARB1-205ENST00000538291 RETNLBQ9BQ08 111 aa11.86□□□□□ -0.51
SCARB1-205ENST00000538291 USP9XQ93008 2570 aaPredicted RBP11.86□□□□□ -0.51
SCARB1-205ENST00000538291 LINC00575Q6W349 94 aa11.85□□□□□ -0.51
SCARB1-205ENST00000538291 CHD8Q9HCK8 2581 aa11.85□□□□□ -0.51
SCARB1-205ENST00000538291 Q6Q795 121 aa11.85□□□□□ -0.51
SCARB1-205ENST00000538291 RAI1Q7Z5J4 1906 aaPredicted RBP11.84□□□□□ -0.51
SCARB1-205ENST00000538291 LINC00310P59036 64 aa11.84□□□□□ -0.51
SCARB1-205ENST00000538291 ATG2AQ2TAZ0 1938 aa11.83□□□□□ -0.52
SCARB1-205ENST00000538291 PRLHP81277 87 aa11.82□□□□□ -0.52
SCARB1-205ENST00000538291 EXPH5Q8NEV8 1989 aa11.82□□□□□ -0.52
SCARB1-205ENST00000538291 CCDC179H3BU77 68 aa11.82□□□□□ -0.52
SCARB1-205ENST00000538291 MDFIQ99750 246 aa11.81□□□□□ -0.52
SCARB1-205ENST00000538291 Q8N3U1 123 aa11.81□□□□□ -0.52
SCARB1-205ENST00000538291 PTPRSQ13332 1948 aa11.8□□□□□ -0.52
SCARB1-205ENST00000538291 C22orf24Q9Y442 160 aa11.8□□□□□ -0.52
SCARB1-205ENST00000538291 PCOTHQ58A44 107 aa11.8□□□□□ -0.52
SCARB1-205ENST00000538291 A0A087WVE0 104 aa11.8□□□□□ -0.52
SCARB1-205ENST00000538291 SMIM26A0A096LP01 95 aa11.79□□□□□ -0.52
SCARB1-205ENST00000538291 SMCR5Q8TEV8 140 aa11.79□□□□□ -0.52
SCARB1-205ENST00000538291 ZNF462Q96JM2 2506 aa11.79□□□□□ -0.52
SCARB1-205ENST00000538291 SPINK1P00995 79 aa11.79□□□□□ -0.52
SCARB1-205ENST00000538291 DEFB116Q30KQ4 102 aa11.77□□□□□ -0.52
SCARB1-205ENST00000538291 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.52
SCARB1-205ENST00000538291 H0Y9P7 68 aa11.76□□□□□ -0.53
SCARB1-205ENST00000538291 C11orf72Q8NBR9 251 aa11.76□□□□□ -0.53
SCARB1-205ENST00000538291 A0A096LNJ9 63 aa11.76□□□□□ -0.53
SCARB1-205ENST00000538291 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
SCARB1-205ENST00000538291 A8MTW9 85 aa11.75□□□□□ -0.53
SCARB1-205ENST00000538291 TRBV7-7A0A0K0K1E9 115 aa11.75□□□□□ -0.53
SCARB1-205ENST00000538291 SETD2Q9BYW2 2564 aaPredicted RBP11.74□□□□□ -0.53
SCARB1-205ENST00000538291 HCG22E2RYF7 251 aa11.73□□□□□ -0.53
SCARB1-205ENST00000538291 KIF25-AS1Q9Y6Z4 181 aa11.73□□□□□ -0.53
SCARB1-205ENST00000538291 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
SCARB1-205ENST00000538291 AGRNO00468 2067 aa11.72□□□□□ -0.53
SCARB1-205ENST00000538291 CEP295Q9C0D2 2601 aa11.7□□□□□ -0.54
SCARB1-205ENST00000538291 USP9YO00507 2555 aaPredicted RBP11.7□□□□□ -0.54
SCARB1-205ENST00000538291 ANKRD11Q6UB99 2663 aaPredicted RBP11.69□□□□□ -0.54
SCARB1-205ENST00000538291 SOSTDC1Q6X4U4 206 aa11.69□□□□□ -0.54
SCARB1-205ENST00000538291 ADAMTS20P59510 1910 aa11.69□□□□□ -0.54
SCARB1-205ENST00000538291 IGHV3OR16-9A0A0B4J2B5 98 aa11.68□□□□□ -0.54
SCARB1-205ENST00000538291 IGLV5-39A0A0G2JS06 123 aa11.68□□□□□ -0.54
SCARB1-205ENST00000538291 H3BNG1 76 aa11.67□□□□□ -0.54
SCARB1-205ENST00000538291 MUC4Q99102 2169 aa11.67□□□□□ -0.54
SCARB1-205ENST00000538291 IGKV2D-30A0A075B6S6 120 aa11.67□□□□□ -0.54
SCARB1-205ENST00000538291 IGKV2-30P06310 120 aa11.67□□□□□ -0.54
SCARB1-205ENST00000538291 SPACA4Q8TDM5 124 aa11.67□□□□□ -0.54
SCARB1-205ENST00000538291 PKD1L2Q7Z442 2459 aa11.66□□□□□ -0.54
SCARB1-205ENST00000538291 LINC00167Q96N53 147 aa11.66□□□□□ -0.54
SCARB1-205ENST00000538291 KIAA0087Q14695 138 aa11.66□□□□□ -0.54
SCARB1-205ENST00000538291 KRTAP24-1Q3LI83 254 aa11.65□□□□□ -0.54
SCARB1-205ENST00000538291 hDV103S1A0JD37 113 aa11.65□□□□□ -0.54
SCARB1-205ENST00000538291 FAM229AH3BQW9 127 aa11.64□□□□□ -0.55
SCARB1-205ENST00000538291 TMEM254Q8TBM7 123 aa11.64□□□□□ -0.55
SCARB1-205ENST00000538291 LINC00846Q9NV44 126 aa11.64□□□□□ -0.55
SCARB1-205ENST00000538291 MOBPQ13875 183 aa11.64□□□□□ -0.55
SCARB1-205ENST00000538291 C6orf48Q9UBA6 75 aa11.62□□□□□ -0.55
SCARB1-205ENST00000538291 CPAMD8Q8IZJ3 1885 aa11.62□□□□□ -0.55
SCARB1-205ENST00000538291 C1orf64Q8NEQ6 169 aa11.62□□□□□ -0.55
SCARB1-205ENST00000538291 CXCL6P80162 114 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms