RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 KRTAP3-3Q9BYR6 98 aa5.2□□□□□ -1.58
SPARC-208ENST00000538026 KRTAP3-2Q9BYR7 98 aa5.2□□□□□ -1.58
SPARC-208ENST00000538026 TINCRA0A1B0GVN0 87 aa5.19□□□□□ -1.58
SPARC-208ENST00000538026 SMIM1B2RUZ4 78 aa5.19□□□□□ -1.58
SPARC-208ENST00000538026 G0S2P27469 103 aa5.19□□□□□ -1.58
SPARC-208ENST00000538026 LINC00310P59036 64 aa5.19□□□□□ -1.58
SPARC-208ENST00000538026 HERVK_113P63121 156 aa5.19□□□□□ -1.58
SPARC-208ENST00000538026 RPL18AQ02543 176 aaKnown RBP5.19□□□□□ -1.58
SPARC-208ENST00000538026 SRSF9Q13242 221 aaKnown RBP eCLIP5.19□□□□□ -1.58
SPARC-208ENST00000538026 NDUFA5Q16718 116 aa5.19□□□□□ -1.58
SPARC-208ENST00000538026 C9orf129Q5T035 196 aaKnown RBP5.19□□□□□ -1.58
SPARC-208ENST00000538026 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
SPARC-208ENST00000538026 PHF5AQ7RTV0 110 aaKnown RBP5.19□□□□□ -1.58
SPARC-208ENST00000538026 LINC00474Q9P2X8 69 aa5.19□□□□□ -1.58
SPARC-208ENST00000538026 TMA7Q9Y2S6 64 aaKnown RBP5.19□□□□□ -1.58
SPARC-208ENST00000538026 PMVKQ15126 192 aa5.18□□□□□ -1.58
SPARC-208ENST00000538026 Q8IZM0 81 aa5.18□□□□□ -1.58
SPARC-208ENST00000538026 TRBV30A0A0K0K1B3 111 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 COLCA2A8K830 154 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 OXTP01178 125 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 IGLC3P0DOY3 106 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 GAGE2EQ4V326 116 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 PAPPA-AS1Q5QFB9 102 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 LINC00469Q8N7U9 141 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 GEMIN7Q9H840 131 aaKnown RBP5.17□□□□□ -1.58
SPARC-208ENST00000538026 SMCO4Q9NRQ5 59 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 TOMM7Q9P0U1 55 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 GAGE2DQ9UEU5 116 aa5.17□□□□□ -1.58
SPARC-208ENST00000538026 IGLV5-39A0A0G2JS06 123 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 NDUFC2-KCTD14E9PQ53 114 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 J3QL48 77 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 NUPR1O60356 82 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 HBDP02042 147 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 TRGC2P03986 189 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 SPINK8P0C7L1 97 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 ZNF22P17026 224 aaPredicted RBP5.16□□□□□ -1.58
SPARC-208ENST00000538026 SERTAD4-AS1Q5TG53 156 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 C7orf33Q8WU49 177 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 PSORS1C2Q9UIG4 136 aa5.16□□□□□ -1.58
SPARC-208ENST00000538026 LINC01549A6NIU2 74 aa5.15□□□□□ -1.59
SPARC-208ENST00000538026 SEC11AP67812 179 aa5.15□□□□□ -1.59
SPARC-208ENST00000538026 ODF1Q14990 250 aa5.15□□□□□ -1.59
SPARC-208ENST00000538026 C6orf226Q5I0X4 101 aa5.15□□□□□ -1.59
SPARC-208ENST00000538026 PKIGQ9Y2B9 76 aa5.15□□□□□ -1.59
SPARC-208ENST00000538026 RNF213Q63HN8 5207 aa5.15□□□□□ -1.59
SPARC-208ENST00000538026 C11orf86A6NJI1 115 aa5.14□□□□□ -1.59
SPARC-208ENST00000538026 F8VRH5 84 aa5.14□□□□□ -1.59
SPARC-208ENST00000538026 SCO1O75880 301 aa5.14□□□□□ -1.59
SPARC-208ENST00000538026 FAM19A5Q7Z5A7 132 aaPredicted RBP5.14□□□□□ -1.59
SPARC-208ENST00000538026 FAM19A2Q8N3H0 131 aa5.14□□□□□ -1.59
SPARC-208ENST00000538026 COX7B2Q8TF08 81 aa5.14□□□□□ -1.59
SPARC-208ENST00000538026 XAGE1AQ9HD64 81 aa5.14□□□□□ -1.59
SPARC-208ENST00000538026 PRSS2P07478 247 aa5.13□□□□□ -1.59
SPARC-208ENST00000538026 NDUFA6P56556 154 aa5.13□□□□□ -1.59
SPARC-208ENST00000538026 KRTAP10-8P60410 259 aa5.13□□□□□ -1.59
SPARC-208ENST00000538026 CKS1BP61024 79 aa5.13□□□□□ -1.59
SPARC-208ENST00000538026 BAGE3Q86Y29 109 aa5.13□□□□□ -1.59
SPARC-208ENST00000538026 CHCHD1Q96BP2 118 aaKnown RBP5.13□□□□□ -1.59
SPARC-208ENST00000538026 PACRGQ96M98 296 aaPredicted RBP5.13□□□□□ -1.59
SPARC-208ENST00000538026 ATP5LO75964 103 aa5.12□□□□□ -1.59
SPARC-208ENST00000538026 RAB5BP61020 215 aa5.12□□□□□ -1.59
SPARC-208ENST00000538026 LINC01600Q96MT4 127 aa5.12□□□□□ -1.59
SPARC-208ENST00000538026 C22orf24Q9Y442 160 aa5.12□□□□□ -1.59
SPARC-208ENST00000538026 SPINK6Q6UWN8 80 aa5.11□□□□□ -1.59
SPARC-208ENST00000538026 Q8NDZ9 215 aa5.11□□□□□ -1.59
SPARC-208ENST00000538026 IFI27L1Q96BM0 104 aa5.11□□□□□ -1.59
SPARC-208ENST00000538026 TRAV12-1A0A0B4J245 112 aa5.1□□□□□ -1.59
SPARC-208ENST00000538026 M0QXV9 152 aa5.1□□□□□ -1.59
SPARC-208ENST00000538026 SERF1AO75920 110 aa5.1□□□□□ -1.59
SPARC-208ENST00000538026 C1orf137Q5JT78 98 aa5.1□□□□□ -1.59
SPARC-208ENST00000538026 CHTOPQ9Y3Y2 248 aaKnown RBP5.1□□□□□ -1.59
SPARC-208ENST00000538026 TMEM223A0PJW6 202 aa5.09□□□□□ -1.59
SPARC-208ENST00000538026 H3BRM9 83 aa5.09□□□□□ -1.59
SPARC-208ENST00000538026 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
SPARC-208ENST00000538026 CXCL5P42830 114 aa5.09□□□□□ -1.59
SPARC-208ENST00000538026 ZNF625Q96I27 306 aaPredicted RBP5.09□□□□□ -1.59
SPARC-208ENST00000538026 TMEM170BQ5T4T1 132 aa5.08□□□□□ -1.6
SPARC-208ENST00000538026 PLA2G2DQ9UNK4 145 aa5.08□□□□□ -1.6
SPARC-208ENST00000538026 IGLV5-37A0A075B6J1 123 aa5.07□□□□□ -1.6
SPARC-208ENST00000538026 HSBP1O75506 76 aa5.07□□□□□ -1.6
SPARC-208ENST00000538026 KRTAP1-4P0C5Y4 121 aa5.07□□□□□ -1.6
SPARC-208ENST00000538026 LINC00167Q96N53 147 aa5.07□□□□□ -1.6
SPARC-208ENST00000538026 SND1-IT1Q9HBX3 110 aa5.07□□□□□ -1.6
SPARC-208ENST00000538026 HIST1H2BKO60814 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST1H2BJP06899 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST1H2BOP23527 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST1H2BBP33778 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 PFN2P35080 140 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST1H2BDP58876 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 TSPEAR-AS2P59090 65 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST1H2BCP62807 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST2H2BEQ16778 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST1H2BHQ93079 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST1H2BNQ99877 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 HIST1H2BMQ99879 126 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 TP73-AS1Q9UF72 201 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 ERG28Q9UKR5 140 aa5.06□□□□□ -1.6
SPARC-208ENST00000538026 RPL37AP8A6NKH3 93 aa5.05□□□□□ -1.6
SPARC-208ENST00000538026 LEPROTL1O95214 131 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms