RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 NBASA2RRP1 2371 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 DCHS2Q6V1P9 2916 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 LINC00959A0A1B0GUT2 108 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 H0YGX0 51 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 ATOX1O00244 68 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 LY6G6DO95868 133 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 INAFM2P0DMQ5 153 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 CXCL5P42830 114 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 CCL18P55774 89 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 HRCT1Q6UXD1 115 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 WFDC11Q8NEX6 87 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 SMIM11BQ8TCY0 68 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 SMCR5Q8TEV8 140 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 OBSCN-AS1Q96MR7 158 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 WFDC10AQ9H1F0 79 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 IGF2RP11717 2491 aa3.97□□□□□ -1.77
VPS33A-203ENST00000536212 KALRNO60229 2985 aa3.96□□□□□ -1.77
VPS33A-203ENST00000536212 A0A1B0GUV1 79 aa3.96□□□□□ -1.78
VPS33A-203ENST00000536212 PFN2P35080 140 aa3.96□□□□□ -1.78
VPS33A-203ENST00000536212 LINC00158P58513 81 aa3.96□□□□□ -1.78
VPS33A-203ENST00000536212 C5orf38Q86SI9 138 aa3.96□□□□□ -1.78
VPS33A-203ENST00000536212 A0A0U1RQV1 116 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 PLA2G2AP14555 144 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 Q5XG85 94 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 FAM19A1Q7Z5A9 133 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 Q8IZM0 81 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 LINC00167Q96N53 147 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 CHCHD5Q9BSY4 110 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 TOMM7Q9P0U1 55 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 PKIGQ9Y2B9 76 aa3.95□□□□□ -1.78
VPS33A-203ENST00000536212 SPTAN1Q13813 2472 aaKnown RBP3.95□□□□□ -1.78
VPS33A-203ENST00000536212 A0A087WYN8 130 aa3.94□□□□□ -1.78
VPS33A-203ENST00000536212 FAM236DA0A1B0GTK5 79 aa3.94□□□□□ -1.78
VPS33A-203ENST00000536212 FAM236CP0DP71 79 aa3.94□□□□□ -1.78
VPS33A-203ENST00000536212 SS18Q15532 418 aa3.94□□□□□ -1.78
VPS33A-203ENST00000536212 Q9HAA7 133 aa3.94□□□□□ -1.78
VPS33A-203ENST00000536212 KLK5Q9Y337 293 aaPredicted RBP3.94□□□□□ -1.78
VPS33A-203ENST00000536212 CSMD1Q96PZ7 3565 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 SORL1Q92673 2214 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 IGKV3OR2-268A0A0C4DH90 116 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 FAM236AA0A1B0GUQ0 79 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 FAM236BA0A1B0GV22 79 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 HILS1P60008 231 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 HIST1H4AP62805 103 aaKnown RBP3.93□□□□□ -1.78
VPS33A-203ENST00000536212 KIAA0087Q14695 138 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 MRPL55Q7Z7F7 128 aaKnown RBP3.93□□□□□ -1.78
VPS33A-203ENST00000536212 RETNQ9HD89 108 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 PRO0255Q9UI72 69 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 SERP1Q9Y6X1 66 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 CSPG4Q6UVK1 2322 aa3.93□□□□□ -1.78
VPS33A-203ENST00000536212 LRBAP50851 2863 aa3.92□□□□□ -1.78
VPS33A-203ENST00000536212 DOPEY1Q5JWR5 2465 aa3.92□□□□□ -1.78
VPS33A-203ENST00000536212 SMIM26A0A096LP01 95 aa3.92□□□□□ -1.78
VPS33A-203ENST00000536212 IGHV4-28A0A0C4DH34 117 aa3.92□□□□□ -1.78
VPS33A-203ENST00000536212 LYRM9A8MSI8 78 aa3.92□□□□□ -1.78
VPS33A-203ENST00000536212 DNAL4O96015 105 aa3.92□□□□□ -1.78
VPS33A-203ENST00000536212 NANOS2P60321 138 aaKnown RBP3.92□□□□□ -1.78
VPS33A-203ENST00000536212 COX17Q14061 63 aa3.92□□□□□ -1.78
VPS33A-203ENST00000536212 C9orf129Q5T035 196 aaKnown RBP3.92□□□□□ -1.78
VPS33A-203ENST00000536212 Q6JHZ5 121 aa3.92□□□□□ -1.78
VPS33A-203ENST00000536212 LAMA5O15230 3695 aa3.92□□□□□ -1.78
VPS33A-203ENST00000536212 LECT2O14960 151 aa3.91□□□□□ -1.78
VPS33A-203ENST00000536212 DEFB130BP0DP73 79 aa3.91□□□□□ -1.78
VPS33A-203ENST00000536212 DEFB130AP0DP74 79 aa3.91□□□□□ -1.78
VPS33A-203ENST00000536212 ATP5EP56381 51 aaPredicted RBP3.91□□□□□ -1.78
VPS33A-203ENST00000536212 KRTAP10-3P60369 221 aa3.91□□□□□ -1.78
VPS33A-203ENST00000536212 MUC7Q8TAX7 377 aa3.91□□□□□ -1.78
VPS33A-203ENST00000536212 RELNP78509 3460 aa3.9□□□□□ -1.79
VPS33A-203ENST00000536212 EPM2AB3EWF7 344 aa3.9□□□□□ -1.79
VPS33A-203ENST00000536212 XCL1P47992 114 aa3.9□□□□□ -1.79
VPS33A-203ENST00000536212 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
VPS33A-203ENST00000536212 C2orf48Q96LS8 159 aa3.9□□□□□ -1.79
VPS33A-203ENST00000536212 C14orf132Q9NPU4 83 aa3.9□□□□□ -1.79
VPS33A-203ENST00000536212 LINC00846Q9NV44 126 aa3.9□□□□□ -1.79
VPS33A-203ENST00000536212 ORMDL1Q9P0S3 153 aa3.9□□□□□ -1.79
VPS33A-203ENST00000536212 CEP295Q9C0D2 2601 aa3.89□□□□□ -1.79
VPS33A-203ENST00000536212 CCKP06307 115 aa3.89□□□□□ -1.79
VPS33A-203ENST00000536212 Q6ZRU5 148 aa3.89□□□□□ -1.79
VPS33A-203ENST00000536212 Q8N814 137 aa3.89□□□□□ -1.79
VPS33A-203ENST00000536212 CHCHD10Q8WYQ3 142 aaPredicted RBP3.89□□□□□ -1.79
VPS33A-203ENST00000536212 TRBV7-6A0A0J9YX20 115 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 JMJD7-PLA2G4BH0Y9G9 81 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 TMEM256-PLSCR3K7ERE1 68 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 NCR3O14931 201 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 C10orf25Q5T742 122 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 C9orf66Q5T8R8 295 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 LYPD5Q6UWN5 251 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 PRR15Q8IV56 129 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 LINC00269Q8N2A0 174 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 SERP2Q8N6R1 65 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 MPLKIPQ8TAP9 179 aa3.88□□□□□ -1.79
VPS33A-203ENST00000536212 TACC2O95359 2948 aa3.87□□□□□ -1.79
VPS33A-203ENST00000536212 A0A0J9YWU9 116 aa3.87□□□□□ -1.79
VPS33A-203ENST00000536212 BCE1O60756 84 aa3.87□□□□□ -1.79
VPS33A-203ENST00000536212 IGHV4-30-4P0DP06 118 aa3.87□□□□□ -1.79
VPS33A-203ENST00000536212 RPL18AQ02543 176 aaKnown RBP3.87□□□□□ -1.79
VPS33A-203ENST00000536212 REG3AQ06141 175 aa3.87□□□□□ -1.79
VPS33A-203ENST00000536212 S100A7L2Q5SY68 101 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms