RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 UBE2BP63146 152 aa8.02□□□□□ -1.13
RTN3-207ENST00000536011 SEC11AP67812 179 aa8.02□□□□□ -1.13
RTN3-207ENST00000536011 CTDSP1Q9GZU7 261 aa8.02□□□□□ -1.13
RTN3-207ENST00000536011 AMELXQ99217 191 aa8.01□□□□□ -1.13
RTN3-207ENST00000536011 H0Y9J4 135 aa8□□□□□ -1.13
RTN3-207ENST00000536011 HERVK_113P63121 156 aa8□□□□□ -1.13
RTN3-207ENST00000536011 ODF1Q14990 250 aa8□□□□□ -1.13
RTN3-207ENST00000536011 C2orf82Q6UX34 121 aa8□□□□□ -1.13
RTN3-207ENST00000536011 C6orf226Q5I0X4 101 aa7.99□□□□□ -1.13
RTN3-207ENST00000536011 LINC00173Q6ZV60 143 aa7.99□□□□□ -1.13
RTN3-207ENST00000536011 Q8IZM0 81 aa7.99□□□□□ -1.13
RTN3-207ENST00000536011 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
RTN3-207ENST00000536011 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
RTN3-207ENST00000536011 FAM19A3Q7Z5A8 133 aa7.98□□□□□ -1.13
RTN3-207ENST00000536011 TIMM17AQ99595 171 aa7.98□□□□□ -1.13
RTN3-207ENST00000536011 ALKBH7Q9BT30 221 aaPredicted RBP7.98□□□□□ -1.13
RTN3-207ENST00000536011 GEMIN7Q9H840 131 aaKnown RBP7.98□□□□□ -1.13
RTN3-207ENST00000536011 IGLV1-50A0A075B6I6 118 aa7.97□□□□□ -1.13
RTN3-207ENST00000536011 LINC01549A6NIU2 74 aa7.97□□□□□ -1.13
RTN3-207ENST00000536011 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
RTN3-207ENST00000536011 F8VRH5 84 aa7.96□□□□□ -1.14
RTN3-207ENST00000536011 CXCL5P42830 114 aa7.96□□□□□ -1.14
RTN3-207ENST00000536011 LBHQ53QV2 105 aaPredicted RBP7.96□□□□□ -1.14
RTN3-207ENST00000536011 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.14
RTN3-207ENST00000536011 ZC2HC1BQ5TFG8 222 aa7.96□□□□□ -1.14
RTN3-207ENST00000536011 RPL13AP40429 203 aaKnown RBP7.95□□□□□ -1.14
RTN3-207ENST00000536011 CLLU1Q5K131 121 aa7.95□□□□□ -1.14
RTN3-207ENST00000536011 KRTAP11-1Q8IUC1 163 aa7.95□□□□□ -1.14
RTN3-207ENST00000536011 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
RTN3-207ENST00000536011 TOMM6Q96B49 74 aa7.95□□□□□ -1.14
RTN3-207ENST00000536011 NUPR1O60356 82 aa7.94□□□□□ -1.14
RTN3-207ENST00000536011 UQCC3Q6UW78 93 aa7.94□□□□□ -1.14
RTN3-207ENST00000536011 ERASQ7Z444 233 aa7.94□□□□□ -1.14
RTN3-207ENST00000536011 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
RTN3-207ENST00000536011 KRTAP7-1Q8IUC3 87 aa7.94□□□□□ -1.14
RTN3-207ENST00000536011 SCGB3A1Q96QR1 104 aa7.94□□□□□ -1.14
RTN3-207ENST00000536011 CDKN2A-AS1Q9UH64 79 aa7.94□□□□□ -1.14
RTN3-207ENST00000536011 S100PP25815 95 aa7.93□□□□□ -1.14
RTN3-207ENST00000536011 LINC00469Q8N7U9 141 aa7.93□□□□□ -1.14
RTN3-207ENST00000536011 TP73-AS1Q9UF72 201 aa7.92□□□□□ -1.14
RTN3-207ENST00000536011 TINCRA0A1B0GVN0 87 aa7.91□□□□□ -1.14
RTN3-207ENST00000536011 ZNF861PO60384 105 aa7.91□□□□□ -1.14
RTN3-207ENST00000536011 KIAA1644Q3SXP7 199 aa7.91□□□□□ -1.14
RTN3-207ENST00000536011 GNB1LQ9BYB4 327 aa7.91□□□□□ -1.14
RTN3-207ENST00000536011 XAGE1AQ9HD64 81 aa7.91□□□□□ -1.14
RTN3-207ENST00000536011 CARHSP1Q9Y2V2 147 aaKnown RBP7.91□□□□□ -1.14
RTN3-207ENST00000536011 C22orf24Q9Y442 160 aa7.91□□□□□ -1.14
RTN3-207ENST00000536011 TMEM218A2RU14 115 aa7.9□□□□□ -1.14
RTN3-207ENST00000536011 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
RTN3-207ENST00000536011 COX19Q49B96 90 aa7.9□□□□□ -1.14
RTN3-207ENST00000536011 PDZD11Q5EBL8 140 aa7.9□□□□□ -1.14
RTN3-207ENST00000536011 SMIM1B2RUZ4 78 aa7.89□□□□□ -1.15
RTN3-207ENST00000536011 ANKRD39Q53RE8 183 aa7.89□□□□□ -1.15
RTN3-207ENST00000536011 MRPL55Q7Z7F7 128 aaKnown RBP7.89□□□□□ -1.15
RTN3-207ENST00000536011 COX7B2Q8TF08 81 aa7.89□□□□□ -1.15
RTN3-207ENST00000536011 KRTAP9-9Q9BYP9 154 aa7.89□□□□□ -1.15
RTN3-207ENST00000536011 KRTAP9-4Q9BYQ2 154 aa7.89□□□□□ -1.15
RTN3-207ENST00000536011 SMCO4Q9NRQ5 59 aa7.89□□□□□ -1.15
RTN3-207ENST00000536011 IGLV5-45A0A087WSX0 123 aa7.88□□□□□ -1.15
RTN3-207ENST00000536011 LINC01546A6NGU7 62 aa7.88□□□□□ -1.15
RTN3-207ENST00000536011 ADCYAP1P18509 176 aa7.88□□□□□ -1.15
RTN3-207ENST00000536011 RPL28P46779 137 aaKnown RBP7.88□□□□□ -1.15
RTN3-207ENST00000536011 FA2HQ7L5A8 372 aa7.88□□□□□ -1.15
RTN3-207ENST00000536011 SEC11CQ9BY50 192 aa7.88□□□□□ -1.15
RTN3-207ENST00000536011 H3BRM9 83 aa7.87□□□□□ -1.15
RTN3-207ENST00000536011 PMVKQ15126 192 aa7.87□□□□□ -1.15
RTN3-207ENST00000536011 CST9LQ9H4G1 147 aa7.87□□□□□ -1.15
RTN3-207ENST00000536011 H3BS24 57 aa7.86□□□□□ -1.15
RTN3-207ENST00000536011 BCE1O60756 84 aa7.86□□□□□ -1.15
RTN3-207ENST00000536011 ATP5LO75964 103 aa7.85□□□□□ -1.15
RTN3-207ENST00000536011 NKAPP1Q8N9T2 125 aa7.85□□□□□ -1.15
RTN3-207ENST00000536011 LPAP08519 4548 aa7.84□□□□□ -1.15
RTN3-207ENST00000536011 SPINK8P0C7L1 97 aa7.84□□□□□ -1.15
RTN3-207ENST00000536011 FABP9Q0Z7S8 132 aa7.84□□□□□ -1.15
RTN3-207ENST00000536011 RHEBQ15382 184 aa7.83□□□□□ -1.16
RTN3-207ENST00000536011 IGLV5-37A0A075B6J1 123 aa7.82□□□□□ -1.16
RTN3-207ENST00000536011 RAB5BP61020 215 aa7.82□□□□□ -1.16
RTN3-207ENST00000536011 PRR4Q16378 134 aa7.82□□□□□ -1.16
RTN3-207ENST00000536011 LINC00167Q96N53 147 aa7.82□□□□□ -1.16
RTN3-207ENST00000536011 RPL37AP8A6NKH3 93 aa7.81□□□□□ -1.16
RTN3-207ENST00000536011 CRYGAP11844 174 aa7.81□□□□□ -1.16
RTN3-207ENST00000536011 GAGE10A6NGK3 116 aa7.8□□□□□ -1.16
RTN3-207ENST00000536011 IGLC3P0DOY3 106 aa7.8□□□□□ -1.16
RTN3-207ENST00000536011 UBE2AP49459 152 aa7.8□□□□□ -1.16
RTN3-207ENST00000536011 NDUFA6P56556 154 aa7.8□□□□□ -1.16
RTN3-207ENST00000536011 SFTA2Q6UW10 78 aa7.8□□□□□ -1.16
RTN3-207ENST00000536011 COMMD7Q86VX2 200 aa7.8□□□□□ -1.16
RTN3-207ENST00000536011 RPS10P5Q9NQ39 176 aa7.8□□□□□ -1.16
RTN3-207ENST00000536011 IGLV5-39A0A0G2JS06 123 aa7.78□□□□□ -1.16
RTN3-207ENST00000536011 HBDP02042 147 aa7.78□□□□□ -1.16
RTN3-207ENST00000536011 IFITM2Q01629 132 aa7.78□□□□□ -1.16
RTN3-207ENST00000536011 COX17Q14061 63 aa7.78□□□□□ -1.16
RTN3-207ENST00000536011 C10orf91Q5T1B1 145 aa7.78□□□□□ -1.16
RTN3-207ENST00000536011 TYMSOSQ8TAI1 123 aa7.78□□□□□ -1.16
RTN3-207ENST00000536011 LINC00614P0C842 121 aa7.77□□□□□ -1.17
RTN3-207ENST00000536011 PFN2P35080 140 aa7.77□□□□□ -1.17
RTN3-207ENST00000536011 RPL24P83731 157 aaKnown RBP7.77□□□□□ -1.17
RTN3-207ENST00000536011 ERG28Q9UKR5 140 aa7.77□□□□□ -1.17
RTN3-207ENST00000536011 IGKV2-28A0A075B6P5 120 aa7.76□□□□□ -1.17
RTN3-207ENST00000536011 A0A087X002 238 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms