RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 GAGE2DQ9UEU5 116 aa7.36□□□□□ -1.23
KNTC1-208ENST00000535410 CXCL5P42830 114 aa7.35□□□□□ -1.23
KNTC1-208ENST00000535410 FABP9Q0Z7S8 132 aa7.35□□□□□ -1.23
KNTC1-208ENST00000535410 LINC00173Q6ZV60 143 aa7.35□□□□□ -1.23
KNTC1-208ENST00000535410 RPS10P5Q9NQ39 176 aa7.35□□□□□ -1.23
KNTC1-208ENST00000535410 PSORS1C2Q9UIG4 136 aa7.35□□□□□ -1.23
KNTC1-208ENST00000535410 LINC01546A6NGU7 62 aa7.34□□□□□ -1.23
KNTC1-208ENST00000535410 NDUFA5Q16718 116 aa7.34□□□□□ -1.23
KNTC1-208ENST00000535410 C1orf137Q5JT78 98 aa7.34□□□□□ -1.23
KNTC1-208ENST00000535410 C10orf91Q5T1B1 145 aa7.34□□□□□ -1.23
KNTC1-208ENST00000535410 C2orf82Q6UX34 121 aa7.34□□□□□ -1.23
KNTC1-208ENST00000535410 MRPL18Q9H0U6 180 aaKnown RBP7.34□□□□□ -1.23
KNTC1-208ENST00000535410 CARHSP1Q9Y2V2 147 aaKnown RBP7.34□□□□□ -1.23
KNTC1-208ENST00000535410 LRP1Q07954 4544 aaKnown RBP7.34□□□□□ -1.23
KNTC1-208ENST00000535410 TINCRA0A1B0GVN0 87 aa7.33□□□□□ -1.24
KNTC1-208ENST00000535410 F8VRH5 84 aa7.33□□□□□ -1.24
KNTC1-208ENST00000535410 ZC2HC1BQ5TFG8 222 aa7.33□□□□□ -1.24
KNTC1-208ENST00000535410 PHF5AQ7RTV0 110 aaKnown RBP7.33□□□□□ -1.24
KNTC1-208ENST00000535410 LINC00469Q8N7U9 141 aa7.33□□□□□ -1.24
KNTC1-208ENST00000535410 DIRC1Q969H9 104 aa7.33□□□□□ -1.24
KNTC1-208ENST00000535410 CDKN2A-AS1Q9UH64 79 aa7.33□□□□□ -1.24
KNTC1-208ENST00000535410 UBE2BP63146 152 aa7.32□□□□□ -1.24
KNTC1-208ENST00000535410 PDZD11Q5EBL8 140 aa7.32□□□□□ -1.24
KNTC1-208ENST00000535410 FAM19A5Q7Z5A7 132 aaPredicted RBP7.32□□□□□ -1.24
KNTC1-208ENST00000535410 H3BRM9 83 aa7.31□□□□□ -1.24
KNTC1-208ENST00000535410 M0QXV9 152 aa7.31□□□□□ -1.24
KNTC1-208ENST00000535410 PMVKQ15126 192 aa7.31□□□□□ -1.24
KNTC1-208ENST00000535410 LBHQ53QV2 105 aaPredicted RBP7.31□□□□□ -1.24
KNTC1-208ENST00000535410 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
KNTC1-208ENST00000535410 TRAPPC1Q9Y5R8 145 aa7.31□□□□□ -1.24
KNTC1-208ENST00000535410 FAM168BA1KXE4 195 aa7.3□□□□□ -1.24
KNTC1-208ENST00000535410 SNAPINO95295 136 aa7.3□□□□□ -1.24
KNTC1-208ENST00000535410 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
KNTC1-208ENST00000535410 RAB5BP61020 215 aa7.3□□□□□ -1.24
KNTC1-208ENST00000535410 ODF1Q14990 250 aa7.3□□□□□ -1.24
KNTC1-208ENST00000535410 SVBPQ8N300 66 aa7.3□□□□□ -1.24
KNTC1-208ENST00000535410 IGLV5-45A0A087WSX0 123 aa7.28□□□□□ -1.24
KNTC1-208ENST00000535410 APOC3P02656 99 aa7.28□□□□□ -1.24
KNTC1-208ENST00000535410 LINC00614P0C842 121 aa7.28□□□□□ -1.24
KNTC1-208ENST00000535410 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
KNTC1-208ENST00000535410 COX7B2Q8TF08 81 aa7.28□□□□□ -1.24
KNTC1-208ENST00000535410 SMIM1B2RUZ4 78 aa7.27□□□□□ -1.25
KNTC1-208ENST00000535410 C9orf129Q5T035 196 aaKnown RBP7.27□□□□□ -1.25
KNTC1-208ENST00000535410 FAT3Q8TDW7 4589 aa7.27□□□□□ -1.25
KNTC1-208ENST00000535410 ATP5LO75964 103 aa7.26□□□□□ -1.25
KNTC1-208ENST00000535410 NDUFA6P56556 154 aa7.26□□□□□ -1.25
KNTC1-208ENST00000535410 TP73-AS1Q9UF72 201 aa7.26□□□□□ -1.25
KNTC1-208ENST00000535410 PKHD1L1Q86WI1 4243 aa7.25□□□□□ -1.25
KNTC1-208ENST00000535410 H0Y9J4 135 aa7.25□□□□□ -1.25
KNTC1-208ENST00000535410 NUPR1O60356 82 aa7.25□□□□□ -1.25
KNTC1-208ENST00000535410 HBDP02042 147 aa7.25□□□□□ -1.25
KNTC1-208ENST00000535410 XAGE1AQ9HD64 81 aa7.25□□□□□ -1.25
KNTC1-208ENST00000535410 C22orf24Q9Y442 160 aa7.25□□□□□ -1.25
KNTC1-208ENST00000535410 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
KNTC1-208ENST00000535410 C18orf32Q8TCD1 76 aa7.24□□□□□ -1.25
KNTC1-208ENST00000535410 SPINK8P0C7L1 97 aa7.23□□□□□ -1.25
KNTC1-208ENST00000535410 IGLC3P0DOY3 106 aa7.23□□□□□ -1.25
KNTC1-208ENST00000535410 MRPL55Q7Z7F7 128 aaKnown RBP7.23□□□□□ -1.25
KNTC1-208ENST00000535410 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
KNTC1-208ENST00000535410 IGLV1-50A0A075B6I6 118 aa7.22□□□□□ -1.25
KNTC1-208ENST00000535410 HMCN2Q8NDA2 5059 aa7.22□□□□□ -1.25
KNTC1-208ENST00000535410 ZNF861PO60384 105 aa7.21□□□□□ -1.26
KNTC1-208ENST00000535410 RPL13AP40429 203 aaKnown RBP7.21□□□□□ -1.26
KNTC1-208ENST00000535410 BAGE3Q86Y29 109 aa7.21□□□□□ -1.26
KNTC1-208ENST00000535410 KRTAP11-1Q8IUC1 163 aa7.21□□□□□ -1.26
KNTC1-208ENST00000535410 IGLV5-39A0A0G2JS06 123 aa7.2□□□□□ -1.26
KNTC1-208ENST00000535410 RPL28P46779 137 aaKnown RBP7.2□□□□□ -1.26
KNTC1-208ENST00000535410 COX17Q14061 63 aa7.2□□□□□ -1.26
KNTC1-208ENST00000535410 NKAPP1Q8N9T2 125 aa7.2□□□□□ -1.26
KNTC1-208ENST00000535410 CHCHD1Q96BP2 118 aaKnown RBP7.2□□□□□ -1.26
KNTC1-208ENST00000535410 A0A096LNJ9 63 aa7.19□□□□□ -1.26
KNTC1-208ENST00000535410 ZNF22P17026 224 aaPredicted RBP7.19□□□□□ -1.26
KNTC1-208ENST00000535410 TMEM170BQ5T4T1 132 aa7.19□□□□□ -1.26
KNTC1-208ENST00000535410 BCE1O60756 84 aa7.18□□□□□ -1.26
KNTC1-208ENST00000535410 RPL24P83731 157 aaKnown RBP7.18□□□□□ -1.26
KNTC1-208ENST00000535410 PMCHL1Q16048 86 aa7.18□□□□□ -1.26
KNTC1-208ENST00000535410 URB1-AS1Q96HZ7 61 aa7.18□□□□□ -1.26
KNTC1-208ENST00000535410 IGLV5-37A0A075B6J1 123 aa7.17□□□□□ -1.26
KNTC1-208ENST00000535410 PFN2P35080 140 aa7.17□□□□□ -1.26
KNTC1-208ENST00000535410 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
KNTC1-208ENST00000535410 LINC00167Q96N53 147 aa7.17□□□□□ -1.26
KNTC1-208ENST00000535410 ERG28Q9UKR5 140 aa7.17□□□□□ -1.26
KNTC1-208ENST00000535410 CHTOPQ9Y3Y2 248 aaKnown RBP7.17□□□□□ -1.26
KNTC1-208ENST00000535410 TRAV12-1A0A0B4J245 112 aa7.16□□□□□ -1.26
KNTC1-208ENST00000535410 IFI27L1Q96BM0 104 aa7.16□□□□□ -1.26
KNTC1-208ENST00000535410 C11orf86A6NJI1 115 aa7.15□□□□□ -1.26
KNTC1-208ENST00000535410 HSBP1O75506 76 aa7.15□□□□□ -1.26
KNTC1-208ENST00000535410 GAGE10A6NGK3 116 aa7.14□□□□□ -1.27
KNTC1-208ENST00000535410 RPL37AP8A6NKH3 93 aa7.14□□□□□ -1.27
KNTC1-208ENST00000535410 LINC00587B1AMM8 73 aa7.14□□□□□ -1.27
KNTC1-208ENST00000535410 ATP6V1G1O75348 118 aa7.14□□□□□ -1.27
KNTC1-208ENST00000535410 UBE2AP49459 152 aa7.14□□□□□ -1.27
KNTC1-208ENST00000535410 YPEL4Q96NS1 127 aa7.14□□□□□ -1.27
KNTC1-208ENST00000535410 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
KNTC1-208ENST00000535410 SND1-IT1Q9HBX3 110 aa7.13□□□□□ -1.27
KNTC1-208ENST00000535410 LINC00158P58513 81 aa7.12□□□□□ -1.27
KNTC1-208ENST00000535410 ZNF625Q96I27 306 aaPredicted RBP7.12□□□□□ -1.27
KNTC1-208ENST00000535410 TMEM223A0PJW6 202 aa7.11□□□□□ -1.27
KNTC1-208ENST00000535410 CRYGAP11844 174 aa7.11□□□□□ -1.27
KNTC1-208ENST00000535410 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms