RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 GAGE2DQ9UEU5 116 aa10.07□□□□□ -0.8
CCDC180-213ENST00000534189 CKS1BP61024 79 aa10.06□□□□□ -0.8
CCDC180-213ENST00000534189 REG3GQ6UW15 175 aa10.06□□□□□ -0.8
CCDC180-213ENST00000534189 FA2HQ7L5A8 372 aa10.06□□□□□ -0.8
CCDC180-213ENST00000534189 PHF5AQ7RTV0 110 aaKnown RBP10.06□□□□□ -0.8
CCDC180-213ENST00000534189 SMCO4Q9NRQ5 59 aa10.06□□□□□ -0.8
CCDC180-213ENST00000534189 LINC01546A6NGU7 62 aa10.05□□□□□ -0.8
CCDC180-213ENST00000534189 NDUFC2-KCTD14E9PQ53 114 aa10.05□□□□□ -0.8
CCDC180-213ENST00000534189 SRSF9Q13242 221 aaKnown RBP eCLIP10.05□□□□□ -0.8
CCDC180-213ENST00000534189 Q8IZM0 81 aa10.05□□□□□ -0.8
CCDC180-213ENST00000534189 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
CCDC180-213ENST00000534189 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
CCDC180-213ENST00000534189 PSORS1C2Q9UIG4 136 aa10.04□□□□□ -0.8
CCDC180-213ENST00000534189 FAM168BA1KXE4 195 aa10.02□□□□□ -0.81
CCDC180-213ENST00000534189 NDUFA5Q16718 116 aa10.02□□□□□ -0.81
CCDC180-213ENST00000534189 C1orf137Q5JT78 98 aa10.02□□□□□ -0.81
CCDC180-213ENST00000534189 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.81
CCDC180-213ENST00000534189 LINC00469Q8N7U9 141 aa10.02□□□□□ -0.81
CCDC180-213ENST00000534189 TINCRA0A1B0GVN0 87 aa10.01□□□□□ -0.81
CCDC180-213ENST00000534189 APOC3P02656 99 aa10.01□□□□□ -0.81
CCDC180-213ENST00000534189 CST9LQ9H4G1 147 aa10.01□□□□□ -0.81
CCDC180-213ENST00000534189 TRAPPC1Q9Y5R8 145 aa10.01□□□□□ -0.81
CCDC180-213ENST00000534189 SNAPINO95295 136 aa10□□□□□ -0.81
CCDC180-213ENST00000534189 PMVKQ15126 192 aa10□□□□□ -0.81
CCDC180-213ENST00000534189 F8VRH5 84 aa9.99□□□□□ -0.81
CCDC180-213ENST00000534189 CXCL5P42830 114 aa9.99□□□□□ -0.81
CCDC180-213ENST00000534189 PDZD11Q5EBL8 140 aa9.99□□□□□ -0.81
CCDC180-213ENST00000534189 SVBPQ8N300 66 aa9.99□□□□□ -0.81
CCDC180-213ENST00000534189 M0QXV9 152 aa9.98□□□□□ -0.81
CCDC180-213ENST00000534189 C9orf129Q5T035 196 aaKnown RBP9.98□□□□□ -0.81
CCDC180-213ENST00000534189 IGLV5-45A0A087WSX0 123 aa9.97□□□□□ -0.81
CCDC180-213ENST00000534189 UBE2BP63146 152 aa9.97□□□□□ -0.81
CCDC180-213ENST00000534189 SMIM1B2RUZ4 78 aa9.96□□□□□ -0.82
CCDC180-213ENST00000534189 IGLV7-43P04211 117 aa9.96□□□□□ -0.82
CCDC180-213ENST00000534189 LINC00614P0C842 121 aa9.96□□□□□ -0.82
CCDC180-213ENST00000534189 C18orf32Q8TCD1 76 aa9.96□□□□□ -0.82
CCDC180-213ENST00000534189 COX7B2Q8TF08 81 aa9.96□□□□□ -0.82
CCDC180-213ENST00000534189 H3BRM9 83 aa9.95□□□□□ -0.82
CCDC180-213ENST00000534189 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
CCDC180-213ENST00000534189 RAB5BP61020 215 aa9.95□□□□□ -0.82
CCDC180-213ENST00000534189 KRTAP7-1Q8IUC3 87 aa9.95□□□□□ -0.82
CCDC180-213ENST00000534189 DIRC1Q969H9 104 aa9.95□□□□□ -0.82
CCDC180-213ENST00000534189 NDUFA6P56556 154 aa9.94□□□□□ -0.82
CCDC180-213ENST00000534189 XAGE1AQ9HD64 81 aa9.94□□□□□ -0.82
CCDC180-213ENST00000534189 FAT4Q6V0I7 4981 aa9.93□□□□□ -0.82
CCDC180-213ENST00000534189 HBDP02042 147 aa9.93□□□□□ -0.82
CCDC180-213ENST00000534189 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
CCDC180-213ENST00000534189 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
CCDC180-213ENST00000534189 LBHQ53QV2 105 aaPredicted RBP9.92□□□□□ -0.82
CCDC180-213ENST00000534189 URB1-AS1Q96HZ7 61 aa9.92□□□□□ -0.82
CCDC180-213ENST00000534189 A0A096LNJ9 63 aa9.91□□□□□ -0.82
CCDC180-213ENST00000534189 ATP5LO75964 103 aa9.91□□□□□ -0.82
CCDC180-213ENST00000534189 IGLC3P0DOY3 106 aa9.91□□□□□ -0.82
CCDC180-213ENST00000534189 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
CCDC180-213ENST00000534189 ODF1Q14990 250 aa9.9□□□□□ -0.82
CCDC180-213ENST00000534189 MUC2Q02817 5179 aa9.9□□□□□ -0.83
CCDC180-213ENST00000534189 LPAP08519 4548 aa9.89□□□□□ -0.83
CCDC180-213ENST00000534189 H0Y9J4 135 aa9.88□□□□□ -0.83
CCDC180-213ENST00000534189 PMCHL1Q16048 86 aa9.88□□□□□ -0.83
CCDC180-213ENST00000534189 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
CCDC180-213ENST00000534189 NUPR1O60356 82 aa9.87□□□□□ -0.83
CCDC180-213ENST00000534189 BAGE3Q86Y29 109 aa9.87□□□□□ -0.83
CCDC180-213ENST00000534189 IGLV5-39A0A0G2JS06 123 aa9.86□□□□□ -0.83
CCDC180-213ENST00000534189 ZNF22P17026 224 aaPredicted RBP9.86□□□□□ -0.83
CCDC180-213ENST00000534189 MRPL55Q7Z7F7 128 aaKnown RBP9.86□□□□□ -0.83
CCDC180-213ENST00000534189 CHCHD1Q96BP2 118 aaKnown RBP9.85□□□□□ -0.83
CCDC180-213ENST00000534189 YPEL4Q96NS1 127 aa9.85□□□□□ -0.83
CCDC180-213ENST00000534189 ZNF861PO60384 105 aa9.83□□□□□ -0.84
CCDC180-213ENST00000534189 TMEM170BQ5T4T1 132 aa9.83□□□□□ -0.84
CCDC180-213ENST00000534189 C11orf86A6NJI1 115 aa9.82□□□□□ -0.84
CCDC180-213ENST00000534189 PFN2P35080 140 aa9.82□□□□□ -0.84
CCDC180-213ENST00000534189 SFTA2Q6UW10 78 aa9.82□□□□□ -0.84
CCDC180-213ENST00000534189 PRR26Q8N8Z3 221 aa9.82□□□□□ -0.84
CCDC180-213ENST00000534189 CHTOPQ9Y3Y2 248 aaKnown RBP9.82□□□□□ -0.84
CCDC180-213ENST00000534189 IGLV1-50A0A075B6I6 118 aa9.81□□□□□ -0.84
CCDC180-213ENST00000534189 NKAPP1Q8N9T2 125 aa9.81□□□□□ -0.84
CCDC180-213ENST00000534189 LINC00167Q96N53 147 aa9.81□□□□□ -0.84
CCDC180-213ENST00000534189 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
CCDC180-213ENST00000534189 IFI27L1Q96BM0 104 aa9.8□□□□□ -0.84
CCDC180-213ENST00000534189 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
CCDC180-213ENST00000534189 BCE1O60756 84 aa9.79□□□□□ -0.84
CCDC180-213ENST00000534189 HSBP1O75506 76 aa9.79□□□□□ -0.84
CCDC180-213ENST00000534189 COX17Q14061 63 aa9.79□□□□□ -0.84
CCDC180-213ENST00000534189 CBLN2Q8IUK8 224 aa9.79□□□□□ -0.84
CCDC180-213ENST00000534189 ERG28Q9UKR5 140 aa9.79□□□□□ -0.84
CCDC180-213ENST00000534189 GAGE10A6NGK3 116 aa9.78□□□□□ -0.84
CCDC180-213ENST00000534189 RPL37AP8A6NKH3 93 aa9.78□□□□□ -0.84
CCDC180-213ENST00000534189 RPL28P46779 137 aaKnown RBP9.78□□□□□ -0.84
CCDC180-213ENST00000534189 KRTAP1-4P0C5Y4 121 aa9.77□□□□□ -0.85
CCDC180-213ENST00000534189 ZNF625Q96I27 306 aaPredicted RBP9.77□□□□□ -0.85
CCDC180-213ENST00000534189 RPL13AP40429 203 aaKnown RBP9.76□□□□□ -0.85
CCDC180-213ENST00000534189 SND1-IT1Q9HBX3 110 aa9.76□□□□□ -0.85
CCDC180-213ENST00000534189 TRGC2P03986 189 aa9.75□□□□□ -0.85
CCDC180-213ENST00000534189 RPL24P83731 157 aaKnown RBP9.75□□□□□ -0.85
CCDC180-213ENST00000534189 TMEM223A0PJW6 202 aa9.74□□□□□ -0.85
CCDC180-213ENST00000534189 FAM19A2Q8N3H0 131 aa9.74□□□□□ -0.85
CCDC180-213ENST00000534189 SLC7A5P1Q8MH63 180 aa9.73□□□□□ -0.85
CCDC180-213ENST00000534189 VPREB1P12018 145 aa9.72□□□□□ -0.85
CCDC180-213ENST00000534189 UBE2AP49459 152 aa9.72□□□□□ -0.85
CCDC180-213ENST00000534189 LINC00158P58513 81 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms