RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 KRTAP3-3Q9BYR6 98 aa6.74□□□□□ -1.33
LDLRAD3-206ENST00000534091 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
LDLRAD3-206ENST00000534091 Q9H8V8 135 aa6.74□□□□□ -1.33
LDLRAD3-206ENST00000534091 IGLV10-54A0A075B6I4 117 aa6.73□□□□□ -1.33
LDLRAD3-206ENST00000534091 A0A0J9YXY3 114 aa6.73□□□□□ -1.33
LDLRAD3-206ENST00000534091 GAGE12HA6NDE8 117 aa6.73□□□□□ -1.33
LDLRAD3-206ENST00000534091 TIMM17BO60830 172 aa6.73□□□□□ -1.33
LDLRAD3-206ENST00000534091 APOMO95445 188 aa6.73□□□□□ -1.33
LDLRAD3-206ENST00000534091 CXCL5P42830 114 aa6.73□□□□□ -1.33
LDLRAD3-206ENST00000534091 VPS13DQ5THJ4 4388 aa6.73□□□□□ -1.33
LDLRAD3-206ENST00000534091 TMEM238C9JI98 176 aa6.72□□□□□ -1.33
LDLRAD3-206ENST00000534091 RTL8CO15255 209 aa6.72□□□□□ -1.33
LDLRAD3-206ENST00000534091 BVES-AS1Q5T3Y7 98 aa6.72□□□□□ -1.33
LDLRAD3-206ENST00000534091 C6orf223Q8N319 242 aa6.72□□□□□ -1.33
LDLRAD3-206ENST00000534091 C1orf43Q9BWL3 253 aa6.72□□□□□ -1.33
LDLRAD3-206ENST00000534091 TM2D2Q9BX73 214 aa6.72□□□□□ -1.33
LDLRAD3-206ENST00000534091 M0R2N4 97 aa6.71□□□□□ -1.34
LDLRAD3-206ENST00000534091 MALP21145 153 aa6.71□□□□□ -1.34
LDLRAD3-206ENST00000534091 HINT1P49773 126 aaPredicted RBP6.71□□□□□ -1.34
LDLRAD3-206ENST00000534091 KIAA0087Q14695 138 aa6.71□□□□□ -1.34
LDLRAD3-206ENST00000534091 Q6ZVH6 145 aa6.71□□□□□ -1.34
LDLRAD3-206ENST00000534091 ORAOV1Q8WV07 137 aa6.71□□□□□ -1.34
LDLRAD3-206ENST00000534091 RMI2Q96E14 147 aa6.71□□□□□ -1.34
LDLRAD3-206ENST00000534091 PRSS2P07478 247 aa6.7□□□□□ -1.34
LDLRAD3-206ENST00000534091 CEND1Q8N111 149 aa6.7□□□□□ -1.34
LDLRAD3-206ENST00000534091 LITAFQ99732 161 aa6.7□□□□□ -1.34
LDLRAD3-206ENST00000534091 SPANXDQ9BXN6 97 aa6.7□□□□□ -1.34
LDLRAD3-206ENST00000534091 SPANXCQ9NY87 97 aa6.7□□□□□ -1.34
LDLRAD3-206ENST00000534091 TOMM7Q9P0U1 55 aa6.7□□□□□ -1.34
LDLRAD3-206ENST00000534091 A0A1B0GVY2 172 aa6.69□□□□□ -1.34
LDLRAD3-206ENST00000534091 HIST1H4GQ99525 98 aa6.69□□□□□ -1.34
LDLRAD3-206ENST00000534091 PPDPFQ9H3Y8 114 aa6.69□□□□□ -1.34
LDLRAD3-206ENST00000534091 COX11Q9Y6N1 276 aa6.69□□□□□ -1.34
LDLRAD3-206ENST00000534091 IGKV2D-24A0A075B6R9 120 aa6.68□□□□□ -1.34
LDLRAD3-206ENST00000534091 F8WDY8 70 aa6.68□□□□□ -1.34
LDLRAD3-206ENST00000534091 PTTG1IPP53801 180 aa6.68□□□□□ -1.34
LDLRAD3-206ENST00000534091 SRSF9Q13242 221 aaKnown RBP eCLIP6.68□□□□□ -1.34
LDLRAD3-206ENST00000534091 CIRBPQ14011 172 aaKnown RBP6.68□□□□□ -1.34
LDLRAD3-206ENST00000534091 C6orf226Q5I0X4 101 aa6.68□□□□□ -1.34
LDLRAD3-206ENST00000534091 IFITM1P13164 125 aa6.67□□□□□ -1.34
LDLRAD3-206ENST00000534091 GCSHP23434 173 aa6.67□□□□□ -1.34
LDLRAD3-206ENST00000534091 FXYD2P54710 66 aa6.67□□□□□ -1.34
LDLRAD3-206ENST00000534091 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
LDLRAD3-206ENST00000534091 BATFQ16520 125 aa6.67□□□□□ -1.34
LDLRAD3-206ENST00000534091 MEIG1Q5JSS6 88 aa6.67□□□□□ -1.34
LDLRAD3-206ENST00000534091 COL5A1-AS1Q5SY13 56 aa6.67□□□□□ -1.34
LDLRAD3-206ENST00000534091 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 A6NDN8 102 aa6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 CKS1BP61024 79 aa6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 NTN5Q8WTR8 489 aaPredicted RBP6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 COPS9Q8WXC6 57 aa6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 Q9HAA7 133 aa6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 PGPEP1Q9NXJ5 209 aa6.66□□□□□ -1.34
LDLRAD3-206ENST00000534091 A0A1B0GWB2 263 aa6.65□□□□□ -1.34
LDLRAD3-206ENST00000534091 RPL24P83731 157 aaKnown RBP6.65□□□□□ -1.34
LDLRAD3-206ENST00000534091 COX17Q14061 63 aa6.65□□□□□ -1.34
LDLRAD3-206ENST00000534091 ADAMTSL4-AS1Q5T5F5 129 aa6.65□□□□□ -1.34
LDLRAD3-206ENST00000534091 ERG28Q9UKR5 140 aa6.65□□□□□ -1.34
LDLRAD3-206ENST00000534091 FRAS1Q86XX4 4008 aa6.64□□□□□ -1.35
LDLRAD3-206ENST00000534091 SMIM13P0DJ93 91 aa6.64□□□□□ -1.35
LDLRAD3-206ENST00000534091 TRBV30A0A0K0K1B3 111 aa6.63□□□□□ -1.35
LDLRAD3-206ENST00000534091 ZNF561-AS1K7EIQ3 104 aa6.63□□□□□ -1.35
LDLRAD3-206ENST00000534091 C2orf82Q6UX34 121 aa6.63□□□□□ -1.35
LDLRAD3-206ENST00000534091 MUSTN1Q8IVN3 82 aa6.63□□□□□ -1.35
LDLRAD3-206ENST00000534091 DNAH10Q8IVF4 4471 aa6.62□□□□□ -1.35
LDLRAD3-206ENST00000534091 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.62□□□□□ -1.35
LDLRAD3-206ENST00000534091 LOC107984156A0A0G2JMH3 177 aa6.62□□□□□ -1.35
LDLRAD3-206ENST00000534091 TNP2Q05952 138 aa6.62□□□□□ -1.35
LDLRAD3-206ENST00000534091 ARL17AQ8IVW1 177 aa6.62□□□□□ -1.35
LDLRAD3-206ENST00000534091 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
LDLRAD3-206ENST00000534091 A0A0B4J2C4 111 aa6.61□□□□□ -1.35
LDLRAD3-206ENST00000534091 A4D1N5 150 aa6.61□□□□□ -1.35
LDLRAD3-206ENST00000534091 TAX1BP3O14907 124 aa6.61□□□□□ -1.35
LDLRAD3-206ENST00000534091 Q6ZRN7 208 aaPredicted RBP6.61□□□□□ -1.35
LDLRAD3-206ENST00000534091 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
LDLRAD3-206ENST00000534091 NHP2Q9NX24 153 aaKnown RBP6.61□□□□□ -1.35
LDLRAD3-206ENST00000534091 USP17L23D6RBM5 183 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 LINC00158P58513 81 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 RNF151Q2KHN1 245 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 HIGD2BQ4VC39 106 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 UNQ6190/PRO20217Q6UXQ8 127 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 SOSTDC1Q6X4U4 206 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 DAND5Q8N907 189 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 CAMK2N2Q96S95 79 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 C6orf48Q9UBA6 75 aa6.6□□□□□ -1.35
LDLRAD3-206ENST00000534091 HECTD4Q9Y4D8 3996 aa6.59□□□□□ -1.35
LDLRAD3-206ENST00000534091 A0A0U1RRA0 63 aa6.59□□□□□ -1.35
LDLRAD3-206ENST00000534091 CFC1BP0CG36 223 aa6.59□□□□□ -1.35
LDLRAD3-206ENST00000534091 CFC1P0CG37 223 aa6.59□□□□□ -1.35
LDLRAD3-206ENST00000534091 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
LDLRAD3-206ENST00000534091 DNAH17Q9UFH2 4485 aa6.58□□□□□ -1.36
LDLRAD3-206ENST00000534091 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
LDLRAD3-206ENST00000534091 PFN2P35080 140 aa6.58□□□□□ -1.36
LDLRAD3-206ENST00000534091 SYCNQ0VAF6 134 aa6.58□□□□□ -1.36
LDLRAD3-206ENST00000534091 C14orf177Q52M58 125 aa6.58□□□□□ -1.36
LDLRAD3-206ENST00000534091 Q6ZRU5 148 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms