RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 LAMTOR2Q9Y2Q5 125 aa10.6□□□□□ -0.71
UBXN1-216ENST00000533908 KRTAP9-2Q9BYQ4 174 aa10.59□□□□□ -0.71
UBXN1-216ENST00000533908 ANAPC11Q9NYG5 84 aa10.59□□□□□ -0.71
UBXN1-216ENST00000533908 BCE1O60756 84 aa10.58□□□□□ -0.72
UBXN1-216ENST00000533908 MRPL55Q7Z7F7 128 aaKnown RBP10.58□□□□□ -0.72
UBXN1-216ENST00000533908 TP73-AS1Q9UF72 201 aa10.58□□□□□ -0.72
UBXN1-216ENST00000533908 F8VRH5 84 aa10.57□□□□□ -0.72
UBXN1-216ENST00000533908 LINC00167Q96N53 147 aa10.57□□□□□ -0.72
UBXN1-216ENST00000533908 RPL37AP8A6NKH3 93 aa10.56□□□□□ -0.72
UBXN1-216ENST00000533908 NPSP0C0P6 89 aa10.56□□□□□ -0.72
UBXN1-216ENST00000533908 RPL28P46779 137 aaKnown RBP10.56□□□□□ -0.72
UBXN1-216ENST00000533908 ORMDL2Q53FV1 153 aa10.56□□□□□ -0.72
UBXN1-216ENST00000533908 LCE2AQ5TA79 106 aaPredicted RBP10.56□□□□□ -0.72
UBXN1-216ENST00000533908 CRYGAP11844 174 aa10.55□□□□□ -0.72
UBXN1-216ENST00000533908 HERVK_113P63121 156 aa10.55□□□□□ -0.72
UBXN1-216ENST00000533908 KRTAP13-2Q52LG2 175 aa10.55□□□□□ -0.72
UBXN1-216ENST00000533908 TYMSOSQ8TAI1 123 aa10.55□□□□□ -0.72
UBXN1-216ENST00000533908 GEMIN7Q9H840 131 aaKnown RBP10.53□□□□□ -0.72
UBXN1-216ENST00000533908 A0A0U1RQV1 116 aa10.52□□□□□ -0.73
UBXN1-216ENST00000533908 GAGE10A6NGK3 116 aa10.52□□□□□ -0.73
UBXN1-216ENST00000533908 K7EMI3 77 aa10.52□□□□□ -0.73
UBXN1-216ENST00000533908 KRTAP13-1Q8IUC0 172 aa10.52□□□□□ -0.73
UBXN1-216ENST00000533908 FAT4Q6V0I7 4981 aa10.51□□□□□ -0.73
UBXN1-216ENST00000533908 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
UBXN1-216ENST00000533908 SEC11AP67812 179 aa10.51□□□□□ -0.73
UBXN1-216ENST00000533908 TOMM6Q96B49 74 aa10.51□□□□□ -0.73
UBXN1-216ENST00000533908 TIMM17AQ99595 171 aa10.51□□□□□ -0.73
UBXN1-216ENST00000533908 RETNLBQ9BQ08 111 aa10.51□□□□□ -0.73
UBXN1-216ENST00000533908 NXT2Q9NPJ8 142 aaKnown RBP10.51□□□□□ -0.73
UBXN1-216ENST00000533908 ADCYAP1P18509 176 aa10.5□□□□□ -0.73
UBXN1-216ENST00000533908 PAPPA-AS1Q5QFB9 102 aa10.49□□□□□ -0.73
UBXN1-216ENST00000533908 ANAPC16Q96DE5 110 aa10.49□□□□□ -0.73
UBXN1-216ENST00000533908 IGLV5-37A0A075B6J1 123 aa10.48□□□□□ -0.73
UBXN1-216ENST00000533908 SCO1O75880 301 aa10.48□□□□□ -0.73
UBXN1-216ENST00000533908 MT-ND4LP03901 98 aa10.48□□□□□ -0.73
UBXN1-216ENST00000533908 CXCL5P42830 114 aa10.48□□□□□ -0.73
UBXN1-216ENST00000533908 RAB5BP61020 215 aa10.48□□□□□ -0.73
UBXN1-216ENST00000533908 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
UBXN1-216ENST00000533908 PNRC1Q12796 327 aaPredicted RBP10.47□□□□□ -0.73
UBXN1-216ENST00000533908 KIAA1644Q3SXP7 199 aa10.47□□□□□ -0.73
UBXN1-216ENST00000533908 PDZD11Q5EBL8 140 aa10.47□□□□□ -0.73
UBXN1-216ENST00000533908 ERASQ7Z444 233 aa10.47□□□□□ -0.73
UBXN1-216ENST00000533908 IGLV5-45A0A087WSX0 123 aa10.46□□□□□ -0.73
UBXN1-216ENST00000533908 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.73
UBXN1-216ENST00000533908 SCGB3A1Q96QR1 104 aa10.46□□□□□ -0.73
UBXN1-216ENST00000533908 SPINK8P0C7L1 97 aa10.44□□□□□ -0.74
UBXN1-216ENST00000533908 G0S2P27469 103 aa10.44□□□□□ -0.74
UBXN1-216ENST00000533908 CST9LQ9H4G1 147 aa10.44□□□□□ -0.74
UBXN1-216ENST00000533908 UBE2AP49459 152 aa10.43□□□□□ -0.74
UBXN1-216ENST00000533908 FAM229BQ4G0N7 80 aa10.43□□□□□ -0.74
UBXN1-216ENST00000533908 LINC00304Q8N9R0 145 aa10.43□□□□□ -0.74
UBXN1-216ENST00000533908 MUC17Q685J3 4493 aa10.42□□□□□ -0.74
UBXN1-216ENST00000533908 IGKV2-28A0A075B6P5 120 aa10.42□□□□□ -0.74
UBXN1-216ENST00000533908 IGKV2D-28P01615 120 aa10.42□□□□□ -0.74
UBXN1-216ENST00000533908 NKAPP1Q8N9T2 125 aa10.41□□□□□ -0.74
UBXN1-216ENST00000533908 PRLHP81277 87 aa10.4□□□□□ -0.74
UBXN1-216ENST00000533908 LINC01546A6NGU7 62 aa10.39□□□□□ -0.75
UBXN1-216ENST00000533908 TPRXLQ17RH7 258 aa10.39□□□□□ -0.75
UBXN1-216ENST00000533908 IGLV7-46A0A075B6I9 117 aa10.38□□□□□ -0.75
UBXN1-216ENST00000533908 TMEM238C9JI98 176 aa10.38□□□□□ -0.75
UBXN1-216ENST00000533908 CDIP1Q9H305 208 aa10.38□□□□□ -0.75
UBXN1-216ENST00000533908 IGKV2D-26A0A0A0MRZ7 120 aa10.37□□□□□ -0.75
UBXN1-216ENST00000533908 VPREB1P12018 145 aa10.37□□□□□ -0.75
UBXN1-216ENST00000533908 PFN2P35080 140 aa10.37□□□□□ -0.75
UBXN1-216ENST00000533908 PMVKQ15126 192 aa10.37□□□□□ -0.75
UBXN1-216ENST00000533908 Q8NDZ9 215 aa10.37□□□□□ -0.75
UBXN1-216ENST00000533908 TMEM126AQ9H061 195 aa10.36□□□□□ -0.75
UBXN1-216ENST00000533908 FAM19A1Q7Z5A9 133 aa10.35□□□□□ -0.75
UBXN1-216ENST00000533908 C3orf22Q8N5N4 141 aa10.35□□□□□ -0.75
UBXN1-216ENST00000533908 PLEKHB2Q96CS7 222 aa10.35□□□□□ -0.75
UBXN1-216ENST00000533908 MRPL18Q9H0U6 180 aaKnown RBP10.35□□□□□ -0.75
UBXN1-216ENST00000533908 SND1-IT1Q9HBX3 110 aa10.35□□□□□ -0.75
UBXN1-216ENST00000533908 IGLV5-39A0A0G2JS06 123 aa10.34□□□□□ -0.75
UBXN1-216ENST00000533908 M0R378 163 aa10.34□□□□□ -0.75
UBXN1-216ENST00000533908 ATP5LO75964 103 aa10.34□□□□□ -0.75
UBXN1-216ENST00000533908 KRTAP9-6A0A140TA67 174 aa10.33□□□□□ -0.76
UBXN1-216ENST00000533908 LINC01549A6NIU2 74 aa10.31□□□□□ -0.76
UBXN1-216ENST00000533908 H3BRM9 83 aa10.31□□□□□ -0.76
UBXN1-216ENST00000533908 IGLC3P0DOY3 106 aa10.31□□□□□ -0.76
UBXN1-216ENST00000533908 PPDPFQ9H3Y8 114 aa10.31□□□□□ -0.76
UBXN1-216ENST00000533908 ERG28Q9UKR5 140 aa10.31□□□□□ -0.76
UBXN1-216ENST00000533908 TRAV9-1A0A075B6T8 112 aa10.3□□□□□ -0.76
UBXN1-216ENST00000533908 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
UBXN1-216ENST00000533908 RAB14P61106 215 aa10.3□□□□□ -0.76
UBXN1-216ENST00000533908 CTAG1AP78358 180 aa10.3□□□□□ -0.76
UBXN1-216ENST00000533908 ZNF625Q96I27 306 aaPredicted RBP10.3□□□□□ -0.76
UBXN1-216ENST00000533908 GNB1LQ9BYB4 327 aa10.3□□□□□ -0.76
UBXN1-216ENST00000533908 A0A096LNJ9 63 aa10.29□□□□□ -0.76
UBXN1-216ENST00000533908 CBLN2Q8IUK8 224 aa10.28□□□□□ -0.76
UBXN1-216ENST00000533908 RPL24P83731 157 aaKnown RBP10.27□□□□□ -0.77
UBXN1-216ENST00000533908 FA2HQ7L5A8 372 aa10.27□□□□□ -0.77
UBXN1-216ENST00000533908 NDUFA6P56556 154 aa10.26□□□□□ -0.77
UBXN1-216ENST00000533908 COX17Q14061 63 aa10.26□□□□□ -0.77
UBXN1-216ENST00000533908 URB1-AS1Q96HZ7 61 aa10.26□□□□□ -0.77
UBXN1-216ENST00000533908 HIGD2AQ9BW72 106 aa10.26□□□□□ -0.77
UBXN1-216ENST00000533908 TMEM218A2RU14 115 aa10.25□□□□□ -0.77
UBXN1-216ENST00000533908 SMCO4Q9NRQ5 59 aa10.25□□□□□ -0.77
UBXN1-216ENST00000533908 CLLU1Q5K131 121 aa10.24□□□□□ -0.77
UBXN1-216ENST00000533908 SPRR4Q96PI1 79 aa10.24□□□□□ -0.77
UBXN1-216ENST00000533908 FABP9Q0Z7S8 132 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms