RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 Q6ZRU5 148 aa5.54□□□□□ -1.52
COPB1-210ENST00000533533 LINC00469Q8N7U9 141 aa5.54□□□□□ -1.52
COPB1-210ENST00000533533 OR10D4PQ8NGN7 298 aa5.54□□□□□ -1.52
COPB1-210ENST00000533533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.54□□□□□ -1.52
COPB1-210ENST00000533533 COLCA2A8K830 154 aa5.53□□□□□ -1.52
COPB1-210ENST00000533533 PANO1I0J062 215 aa5.53□□□□□ -1.52
COPB1-210ENST00000533533 HSBP1O75506 76 aa5.53□□□□□ -1.52
COPB1-210ENST00000533533 MAJINQ3KP22 176 aa5.53□□□□□ -1.52
COPB1-210ENST00000533533 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
COPB1-210ENST00000533533 CHCHD1Q96BP2 118 aaKnown RBP5.53□□□□□ -1.52
COPB1-210ENST00000533533 C2orf48Q96LS8 159 aa5.53□□□□□ -1.52
COPB1-210ENST00000533533 CST9LQ9H4G1 147 aa5.53□□□□□ -1.52
COPB1-210ENST00000533533 PKIGQ9Y2B9 76 aa5.53□□□□□ -1.52
COPB1-210ENST00000533533 A0A096LNJ9 63 aa5.52□□□□□ -1.53
COPB1-210ENST00000533533 NDUFA1O15239 70 aa5.52□□□□□ -1.53
COPB1-210ENST00000533533 ATP5LO75964 103 aa5.52□□□□□ -1.53
COPB1-210ENST00000533533 RPL18AQ02543 176 aaKnown RBP5.52□□□□□ -1.53
COPB1-210ENST00000533533 GAGE2BQ13066 116 aa5.52□□□□□ -1.53
COPB1-210ENST00000533533 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
COPB1-210ENST00000533533 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
COPB1-210ENST00000533533 CDKN2A-AS1Q9UH64 79 aa5.52□□□□□ -1.53
COPB1-210ENST00000533533 A0A096LNI7 61 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 LOC107984640A0A0U1RRK4 108 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 TINCRA0A1B0GVN0 87 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 CKS1BP61024 79 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 CIRBPQ14011 172 aaKnown RBP5.51□□□□□ -1.53
COPB1-210ENST00000533533 PDZD11Q5EBL8 140 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 C6orf226Q5I0X4 101 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 UNQ6190/PRO20217Q6UXQ8 127 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 FAM19A2Q8N3H0 131 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 TNXBP22105 4242 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
COPB1-210ENST00000533533 A0A087WYN8 130 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 H0Y8G0 127 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 SERF1AO75920 110 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 SPINK8P0C7L1 97 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 C10orf25Q5T742 122 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 C2orf82Q6UX34 121 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 FAM19A3Q7Z5A8 133 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 LINC01561Q8N1V8 128 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 STPG4Q8N801 248 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 SPACA4Q8TDM5 124 aa5.5□□□□□ -1.53
COPB1-210ENST00000533533 F8WDY8 70 aa5.49□□□□□ -1.53
COPB1-210ENST00000533533 H3BRM9 83 aa5.49□□□□□ -1.53
COPB1-210ENST00000533533 IFI27L1Q96BM0 104 aa5.49□□□□□ -1.53
COPB1-210ENST00000533533 MRPL35Q9NZE8 188 aaKnown RBP5.49□□□□□ -1.53
COPB1-210ENST00000533533 LINC00474Q9P2X8 69 aa5.49□□□□□ -1.53
COPB1-210ENST00000533533 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
COPB1-210ENST00000533533 FABP4P15090 132 aa5.48□□□□□ -1.53
COPB1-210ENST00000533533 PTTG1IPP53801 180 aa5.48□□□□□ -1.53
COPB1-210ENST00000533533 KIAA0087Q14695 138 aa5.48□□□□□ -1.53
COPB1-210ENST00000533533 GAGE2EQ4V326 116 aa5.48□□□□□ -1.53
COPB1-210ENST00000533533 TMEM170BQ5T4T1 132 aa5.48□□□□□ -1.53
COPB1-210ENST00000533533 Q8IZM0 81 aa5.48□□□□□ -1.53
COPB1-210ENST00000533533 GAGE2DQ9UEU5 116 aa5.48□□□□□ -1.53
COPB1-210ENST00000533533 CHTOPQ9Y3Y2 248 aaKnown RBP5.48□□□□□ -1.53
COPB1-210ENST00000533533 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
COPB1-210ENST00000533533 LEPROTL1O95214 131 aa5.47□□□□□ -1.53
COPB1-210ENST00000533533 IGLC3P0DOY3 106 aa5.47□□□□□ -1.53
COPB1-210ENST00000533533 RNF151Q2KHN1 245 aa5.47□□□□□ -1.53
COPB1-210ENST00000533533 C9orf116Q5BN46 136 aaPredicted RBP5.47□□□□□ -1.53
COPB1-210ENST00000533533 COX7B2Q8TF08 81 aa5.47□□□□□ -1.53
COPB1-210ENST00000533533 C7orf33Q8WU49 177 aa5.47□□□□□ -1.53
COPB1-210ENST00000533533 IGLV5-45A0A087WSX0 123 aa5.46□□□□□ -1.54
COPB1-210ENST00000533533 TRBV30A0A0K0K1B3 111 aa5.46□□□□□ -1.54
COPB1-210ENST00000533533 C11orf86A6NJI1 115 aa5.46□□□□□ -1.54
COPB1-210ENST00000533533 NUPR1O60356 82 aa5.46□□□□□ -1.54
COPB1-210ENST00000533533 ATP6V1G1O75348 118 aa5.46□□□□□ -1.54
COPB1-210ENST00000533533 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
COPB1-210ENST00000533533 S100A1P23297 94 aa5.46□□□□□ -1.54
COPB1-210ENST00000533533 PLAC8Q9NZF1 115 aa5.46□□□□□ -1.54
COPB1-210ENST00000533533 HSPB8Q9UJY1 196 aa5.46□□□□□ -1.54
COPB1-210ENST00000533533 F8VRH5 84 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST1H2BKO60814 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST1H2BJP06899 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST1H2BOP23527 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST1H2BBP33778 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 CXCL5P42830 114 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST1H2BDP58876 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 LINC00310P59036 64 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST1H2BCP62807 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST2H2BEQ16778 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.45□□□□□ -1.54
COPB1-210ENST00000533533 Q6ZRP5 223 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST1H2BHQ93079 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 LINC01600Q96MT4 127 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST1H2BNQ99877 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 HIST1H2BMQ99879 126 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
COPB1-210ENST00000533533 TRAV12-1A0A0B4J245 112 aa5.44□□□□□ -1.54
COPB1-210ENST00000533533 NDUFC2-KCTD14E9PQ53 114 aa5.44□□□□□ -1.54
COPB1-210ENST00000533533 A0A1W2PNN7 141 aa5.43□□□□□ -1.54
COPB1-210ENST00000533533 EIF4EBP3O60516 100 aaPredicted RBP5.43□□□□□ -1.54
COPB1-210ENST00000533533 TLX1NBP0CAT3 122 aa5.43□□□□□ -1.54
COPB1-210ENST00000533533 FAM19A5Q7Z5A7 132 aaPredicted RBP5.43□□□□□ -1.54
COPB1-210ENST00000533533 MAP1LC3CQ9BXW4 147 aa5.43□□□□□ -1.54
COPB1-210ENST00000533533 FAM168BA1KXE4 195 aa5.42□□□□□ -1.54
COPB1-210ENST00000533533 ODF1Q14990 250 aa5.42□□□□□ -1.54
COPB1-210ENST00000533533 ZNF625Q96I27 306 aaPredicted RBP5.42□□□□□ -1.54
COPB1-210ENST00000533533 PMCHL2Q9BQD1 86 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms