RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 SPCS1Q9Y6A9 102 aa14.82□□□□□ -0.04
AP004608.1-202ENST00000533390 FOXI1Q12951 378 aa14.82□□□□□ -0.04
AP004608.1-202ENST00000533390 TRAV8-4A0A0B4J246 113 aa14.81□□□□□ -0.04
AP004608.1-202ENST00000533390 GAGE12HA6NDE8 117 aa14.81□□□□□ -0.04
AP004608.1-202ENST00000533390 K7EP34 96 aa14.81□□□□□ -0.04
AP004608.1-202ENST00000533390 LINC00308Q8TCZ7 52 aa14.8□□□□□ -0.04
AP004608.1-202ENST00000533390 TSPAN13O95857 204 aa14.8□□□□□ -0.04
AP004608.1-202ENST00000533390 CFAP161Q6P656 301 aa14.79□□□□□ -0.04
AP004608.1-202ENST00000533390 HUWE1Q7Z6Z7 4374 aaKnown RBP14.79□□□□□ -0.04
AP004608.1-202ENST00000533390 CKS1BP61024 79 aa14.78□□□□□ -0.04
AP004608.1-202ENST00000533390 LINC01556Q5JQF7 62 aa14.78□□□□□ -0.04
AP004608.1-202ENST00000533390 IBA57-AS1B1ANH7 110 aa14.77□□□□□ -0.05
AP004608.1-202ENST00000533390 CXCL5P42830 114 aa14.77□□□□□ -0.05
AP004608.1-202ENST00000533390 LINC00158P58513 81 aa14.76□□□□□ -0.05
AP004608.1-202ENST00000533390 EIF4EBP3O60516 100 aaPredicted RBP14.76□□□□□ -0.05
AP004608.1-202ENST00000533390 ERG28Q9UKR5 140 aa14.75□□□□□ -0.05
AP004608.1-202ENST00000533390 MIR7-3HGQ8N6C7 128 aa14.74□□□□□ -0.05
AP004608.1-202ENST00000533390 PPDPFQ9H3Y8 114 aa14.74□□□□□ -0.05
AP004608.1-202ENST00000533390 CCL18P55774 89 aa14.74□□□□□ -0.05
AP004608.1-202ENST00000533390 KIAA0087Q14695 138 aa14.74□□□□□ -0.05
AP004608.1-202ENST00000533390 LYRM7Q5U5X0 104 aa14.74□□□□□ -0.05
AP004608.1-202ENST00000533390 KLK5Q9Y337 293 aaPredicted RBP14.74□□□□□ -0.05
AP004608.1-202ENST00000533390 LOC107984156A0A0G2JMH3 177 aa14.73□□□□□ -0.05
AP004608.1-202ENST00000533390 C2orf82Q6UX34 121 aa14.73□□□□□ -0.05
AP004608.1-202ENST00000533390 ARL17AQ8IVW1 177 aa14.73□□□□□ -0.05
AP004608.1-202ENST00000533390 PFN2P35080 140 aa14.72□□□□□ -0.05
AP004608.1-202ENST00000533390 SOSTDC1Q6X4U4 206 aa14.72□□□□□ -0.05
AP004608.1-202ENST00000533390 DNAH10OSP0CZ25 163 aa14.72□□□□□ -0.05
AP004608.1-202ENST00000533390 Q1RN00 199 aa14.72□□□□□ -0.05
AP004608.1-202ENST00000533390 LINC00588Q9Y4M8 146 aa14.72□□□□□ -0.05
AP004608.1-202ENST00000533390 H7C2G1 150 aa14.71□□□□□ -0.05
AP004608.1-202ENST00000533390 SPAG11BQ08648 103 aa14.7□□□□□ -0.06
AP004608.1-202ENST00000533390 NHLRC4P0CG21 123 aaPredicted RBP14.69□□□□□ -0.06
AP004608.1-202ENST00000533390 PSMB2P49721 201 aa14.69□□□□□ -0.06
AP004608.1-202ENST00000533390 C1orf43Q9BWL3 253 aa14.68□□□□□ -0.06
AP004608.1-202ENST00000533390 SCGB1C2P0DMR2 95 aa14.67□□□□□ -0.06
AP004608.1-202ENST00000533390 COX17Q14061 63 aa14.65□□□□□ -0.06
AP004608.1-202ENST00000533390 RPL13AP40429 203 aaKnown RBP14.65□□□□□ -0.06
AP004608.1-202ENST00000533390 IGKV2D-24A0A075B6R9 120 aa14.64□□□□□ -0.07
AP004608.1-202ENST00000533390 KRTAP26-1Q6PEX3 210 aa14.64□□□□□ -0.07
AP004608.1-202ENST00000533390 SND1-IT1Q9HBX3 110 aa14.63□□□□□ -0.07
AP004608.1-202ENST00000533390 H3BMG7 143 aa14.63□□□□□ -0.07
AP004608.1-202ENST00000533390 UPK3BQ9BT76 320 aa14.63□□□□□ -0.07
AP004608.1-202ENST00000533390 C6orf223Q8N319 242 aa14.62□□□□□ -0.07
AP004608.1-202ENST00000533390 DNAH9Q9NYC9 4486 aa14.62□□□□□ -0.07
AP004608.1-202ENST00000533390 TRBV20-1A0A075B6N2 111 aa14.61□□□□□ -0.07
AP004608.1-202ENST00000533390 TRBV30A0A0K0K1B3 111 aa14.61□□□□□ -0.07
AP004608.1-202ENST00000533390 LINC00526Q96FQ7 95 aa14.61□□□□□ -0.07
AP004608.1-202ENST00000533390 ZNF561-AS1K7EIQ3 104 aa14.6□□□□□ -0.07
AP004608.1-202ENST00000533390 UNQ6190/PRO20217Q6UXQ8 127 aa14.6□□□□□ -0.07
AP004608.1-202ENST00000533390 Q9HAA7 133 aa14.6□□□□□ -0.07
AP004608.1-202ENST00000533390 NTN5Q8WTR8 489 aaPredicted RBP14.59□□□□□ -0.07
AP004608.1-202ENST00000533390 COX6CP09669 75 aa14.59□□□□□ -0.07
AP004608.1-202ENST00000533390 TRAV13-2A0A0B4J235 113 aa14.58□□□□□ -0.08
AP004608.1-202ENST00000533390 TRIAP1O43715 76 aa14.58□□□□□ -0.08
AP004608.1-202ENST00000533390 TCL1BO95988 128 aa14.58□□□□□ -0.08
AP004608.1-202ENST00000533390 C9orf116Q5BN46 136 aaPredicted RBP14.58□□□□□ -0.08
AP004608.1-202ENST00000533390 C10orf25Q5T742 122 aa14.57□□□□□ -0.08
AP004608.1-202ENST00000533390 F8W1H4 67 aa14.56□□□□□ -0.08
AP004608.1-202ENST00000533390 HIGD2BQ4VC39 106 aa14.56□□□□□ -0.08
AP004608.1-202ENST00000533390 MUC7Q8TAX7 377 aa14.56□□□□□ -0.08
AP004608.1-202ENST00000533390 APLNQ9ULZ1 77 aa14.55□□□□□ -0.08
AP004608.1-202ENST00000533390 GVQW2A0A096LPI5 108 aaPredicted RBP14.55□□□□□ -0.08
AP004608.1-202ENST00000533390 KRTAP21-3Q3LHN1 58 aa14.55□□□□□ -0.08
AP004608.1-202ENST00000533390 C15orf56Q8N910 161 aa14.55□□□□□ -0.08
AP004608.1-202ENST00000533390 RMI2Q96E14 147 aa14.55□□□□□ -0.08
AP004608.1-202ENST00000533390 CAMK2N2Q96S95 79 aa14.54□□□□□ -0.08
AP004608.1-202ENST00000533390 IGKV2-28A0A075B6P5 120 aa14.53□□□□□ -0.08
AP004608.1-202ENST00000533390 IGKV2D-28P01615 120 aa14.53□□□□□ -0.08
AP004608.1-202ENST00000533390 UBE2DNLQ8IWF7 75 aa14.53□□□□□ -0.08
AP004608.1-202ENST00000533390 COL7A1Q02388 2944 aa14.53□□□□□ -0.08
AP004608.1-202ENST00000533390 NUPR2A6NF83 97 aa14.52□□□□□ -0.08
AP004608.1-202ENST00000533390 LINC00337Q8N6G1 96 aa14.52□□□□□ -0.09
AP004608.1-202ENST00000533390 C2orf48Q96LS8 159 aa14.52□□□□□ -0.09
AP004608.1-202ENST00000533390 ATXN8Q156A1 80 aa14.51□□□□□ -0.09
AP004608.1-202ENST00000533390 C6orf48Q9UBA6 75 aa14.51□□□□□ -0.09
AP004608.1-202ENST00000533390 F8WDY8 70 aa14.49□□□□□ -0.09
AP004608.1-202ENST00000533390 MTURNQ8N3F0 131 aa14.49□□□□□ -0.09
AP004608.1-202ENST00000533390 STAB2Q8WWQ8 2551 aa14.49□□□□□ -0.09
AP004608.1-202ENST00000533390 NDUFC2O95298 119 aa14.48□□□□□ -0.09
AP004608.1-202ENST00000533390 PRO0461Q9UI25 63 aa14.48□□□□□ -0.09
AP004608.1-202ENST00000533390 OR13C6PQ8NH95 151 aa14.47□□□□□ -0.09
AP004608.1-202ENST00000533390 WFDC2Q14508 124 aa14.46□□□□□ -0.09
AP004608.1-202ENST00000533390 Q6ZRU5 148 aa14.46□□□□□ -0.1
AP004608.1-202ENST00000533390 RPL28P46779 137 aaKnown RBP14.44□□□□□ -0.1
AP004608.1-202ENST00000533390 CLEC2BQ92478 149 aa14.44□□□□□ -0.1
AP004608.1-202ENST00000533390 LINC01620Q4KN68 170 aa14.42□□□□□ -0.1
AP004608.1-202ENST00000533390 C9JAW5 83 aa14.42□□□□□ -0.1
AP004608.1-202ENST00000533390 SYCNQ0VAF6 134 aa14.42□□□□□ -0.1
AP004608.1-202ENST00000533390 LST1O00453 97 aa14.41□□□□□ -0.1
AP004608.1-202ENST00000533390 SMIM11BQ8TCY0 68 aa14.41□□□□□ -0.1
AP004608.1-202ENST00000533390 USP17L23D6RBM5 183 aa14.4□□□□□ -0.1
AP004608.1-202ENST00000533390 OCIAD2Q56VL3 154 aa14.4□□□□□ -0.1
AP004608.1-202ENST00000533390 SMCPP49901 116 aaPredicted RBP14.4□□□□□ -0.1
AP004608.1-202ENST00000533390 PRR3P79522 188 aaKnown RBP14.39□□□□□ -0.11
AP004608.1-202ENST00000533390 DNHD1Q96M86 4753 aa14.38□□□□□ -0.11
AP004608.1-202ENST00000533390 SLC25A20O43772 301 aa14.38□□□□□ -0.11
AP004608.1-202ENST00000533390 ETDBQ3ZM63 59 aa14.38□□□□□ -0.11
AP004608.1-202ENST00000533390 CASC10Q5T4H9 136 aa14.38□□□□□ -0.11
AP004608.1-202ENST00000533390 NDUFC2-KCTD14E9PQ53 114 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms