RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 FAM19A5Q7Z5A7 132 aaPredicted RBP14.09□□□□□ -0.15
LTBP3-220ENST00000532661 KRTAP7-1Q8IUC3 87 aa14.09□□□□□ -0.15
LTBP3-220ENST00000532661 LINC01561Q8N1V8 128 aa14.08□□□□□ -0.16
LTBP3-220ENST00000532661 NXT2Q9NPJ8 142 aaKnown RBP14.08□□□□□ -0.16
LTBP3-220ENST00000532661 K7EMI3 77 aa14.07□□□□□ -0.16
LTBP3-220ENST00000532661 TRBV30A0A0K0K1B3 111 aa14.06□□□□□ -0.16
LTBP3-220ENST00000532661 LRP2P98164 4655 aa14.06□□□□□ -0.16
LTBP3-220ENST00000532661 PACRGQ96M98 296 aaPredicted RBP14.05□□□□□ -0.16
LTBP3-220ENST00000532661 ALKBH7Q9BT30 221 aaPredicted RBP14.05□□□□□ -0.16
LTBP3-220ENST00000532661 TOMM7Q9P0U1 55 aa14.05□□□□□ -0.16
LTBP3-220ENST00000532661 NPSP0C0P6 89 aa14.04□□□□□ -0.16
LTBP3-220ENST00000532661 NDUFC2-KCTD14E9PQ53 114 aa14.03□□□□□ -0.16
LTBP3-220ENST00000532661 IGLV7-43P04211 117 aa14.03□□□□□ -0.16
LTBP3-220ENST00000532661 RAB5BP61020 215 aa14.03□□□□□ -0.16
LTBP3-220ENST00000532661 C9orf129Q5T035 196 aaKnown RBP14.03□□□□□ -0.16
LTBP3-220ENST00000532661 FAM19A3Q7Z5A8 133 aa14.03□□□□□ -0.16
LTBP3-220ENST00000532661 PRSS2P07478 247 aa14.02□□□□□ -0.17
LTBP3-220ENST00000532661 TOMM6Q96B49 74 aa14.02□□□□□ -0.17
LTBP3-220ENST00000532661 HIST1H2BKO60814 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST1H2BJP06899 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST1H2BOP23527 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST1H2BBP33778 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST1H2BDP58876 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST1H2BCP62807 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST2H2BEQ16778 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST1H2BHQ93079 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST1H2BNQ99877 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 HIST1H2BMQ99879 126 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 CDKN2A-AS1Q9UH64 79 aa14.01□□□□□ -0.17
LTBP3-220ENST00000532661 M0QXV9 152 aa14□□□□□ -0.17
LTBP3-220ENST00000532661 C6orf226Q5I0X4 101 aa14□□□□□ -0.17
LTBP3-220ENST00000532661 TIMM17AQ99595 171 aa14□□□□□ -0.17
LTBP3-220ENST00000532661 CKS1BP61024 79 aa13.99□□□□□ -0.17
LTBP3-220ENST00000532661 G0S2P27469 103 aa13.98□□□□□ -0.17
LTBP3-220ENST00000532661 HERVK_113P63121 156 aa13.98□□□□□ -0.17
LTBP3-220ENST00000532661 PAPPA-AS1Q5QFB9 102 aa13.98□□□□□ -0.17
LTBP3-220ENST00000532661 Q8IZM0 81 aa13.98□□□□□ -0.17
LTBP3-220ENST00000532661 C18orf32Q8TCD1 76 aa13.98□□□□□ -0.17
LTBP3-220ENST00000532661 LINC00469Q8N7U9 141 aa13.97□□□□□ -0.17
LTBP3-220ENST00000532661 SCGB3A1Q96QR1 104 aa13.97□□□□□ -0.17
LTBP3-220ENST00000532661 GEMIN7Q9H840 131 aaKnown RBP13.97□□□□□ -0.17
LTBP3-220ENST00000532661 UBE2BP63146 152 aa13.96□□□□□ -0.17
LTBP3-220ENST00000532661 SEC11AP67812 179 aa13.96□□□□□ -0.17
LTBP3-220ENST00000532661 ERASQ7Z444 233 aa13.96□□□□□ -0.17
LTBP3-220ENST00000532661 DIRC1Q969H9 104 aa13.96□□□□□ -0.17
LTBP3-220ENST00000532661 H0Y9J4 135 aa13.94□□□□□ -0.18
LTBP3-220ENST00000532661 PRR26Q8N8Z3 221 aa13.94□□□□□ -0.18
LTBP3-220ENST00000532661 XAGE1AQ9HD64 81 aa13.93□□□□□ -0.18
LTBP3-220ENST00000532661 LINC01546A6NGU7 62 aa13.92□□□□□ -0.18
LTBP3-220ENST00000532661 BAGE3Q86Y29 109 aa13.92□□□□□ -0.18
LTBP3-220ENST00000532661 TMA7Q9Y2S6 64 aaKnown RBP13.92□□□□□ -0.18
LTBP3-220ENST00000532661 COA6Q5JTJ3 125 aaKnown RBP13.91□□□□□ -0.18
LTBP3-220ENST00000532661 RNF213Q63HN8 5207 aa13.91□□□□□ -0.18
LTBP3-220ENST00000532661 SMIM1B2RUZ4 78 aa13.9□□□□□ -0.18
LTBP3-220ENST00000532661 F8VRH5 84 aa13.9□□□□□ -0.18
LTBP3-220ENST00000532661 NDUFA6P56556 154 aa13.9□□□□□ -0.18
LTBP3-220ENST00000532661 C22orf24Q9Y442 160 aa13.9□□□□□ -0.18
LTBP3-220ENST00000532661 TINCRA0A1B0GVN0 87 aa13.88□□□□□ -0.19
LTBP3-220ENST00000532661 S100A6P06703 90 aa13.88□□□□□ -0.19
LTBP3-220ENST00000532661 FA2HQ7L5A8 372 aa13.88□□□□□ -0.19
LTBP3-220ENST00000532661 CST9LQ9H4G1 147 aa13.88□□□□□ -0.19
LTBP3-220ENST00000532661 KRTAP1-4P0C5Y4 121 aa13.87□□□□□ -0.19
LTBP3-220ENST00000532661 LINC00614P0C842 121 aa13.87□□□□□ -0.19
LTBP3-220ENST00000532661 CHCHD1Q96BP2 118 aaKnown RBP13.87□□□□□ -0.19
LTBP3-220ENST00000532661 URB1-AS1Q96HZ7 61 aa13.87□□□□□ -0.19
LTBP3-220ENST00000532661 IGLV5-45A0A087WSX0 123 aa13.86□□□□□ -0.19
LTBP3-220ENST00000532661 SERF1AO75920 110 aa13.86□□□□□ -0.19
LTBP3-220ENST00000532661 COX7B2Q8TF08 81 aa13.86□□□□□ -0.19
LTBP3-220ENST00000532661 CXCL5P42830 114 aa13.85□□□□□ -0.19
LTBP3-220ENST00000532661 LINC00310P59036 64 aa13.85□□□□□ -0.19
LTBP3-220ENST00000532661 PDZD11Q5EBL8 140 aa13.85□□□□□ -0.19
LTBP3-220ENST00000532661 LINC01549A6NIU2 74 aa13.84□□□□□ -0.19
LTBP3-220ENST00000532661 SPINK8P0C7L1 97 aa13.84□□□□□ -0.19
LTBP3-220ENST00000532661 PMVKQ15126 192 aa13.84□□□□□ -0.19
LTBP3-220ENST00000532661 NUPR1O60356 82 aa13.81□□□□□ -0.2
LTBP3-220ENST00000532661 HSBP1O75506 76 aa13.81□□□□□ -0.2
LTBP3-220ENST00000532661 LBHQ53QV2 105 aaPredicted RBP13.81□□□□□ -0.2
LTBP3-220ENST00000532661 C5orf52A6NGY3 159 aa13.8□□□□□ -0.2
LTBP3-220ENST00000532661 SNRPEP62304 92 aaKnown RBP13.8□□□□□ -0.2
LTBP3-220ENST00000532661 MRPL55Q7Z7F7 128 aaKnown RBP13.8□□□□□ -0.2
LTBP3-220ENST00000532661 IGLV1-50A0A075B6I6 118 aa13.79□□□□□ -0.2
LTBP3-220ENST00000532661 A0A096LNJ9 63 aa13.79□□□□□ -0.2
LTBP3-220ENST00000532661 ZNF861PO60384 105 aa13.79□□□□□ -0.2
LTBP3-220ENST00000532661 TP73-AS1Q9UF72 201 aa13.78□□□□□ -0.2
LTBP3-220ENST00000532661 LPAP08519 4548 aa13.77□□□□□ -0.2
LTBP3-220ENST00000532661 HIST3H2BBQ8N257 126 aa13.77□□□□□ -0.21
LTBP3-220ENST00000532661 LINC00167Q96N53 147 aa13.76□□□□□ -0.21
LTBP3-220ENST00000532661 RPL37AP8A6NKH3 93 aa13.75□□□□□ -0.21
LTBP3-220ENST00000532661 HBDP02042 147 aa13.75□□□□□ -0.21
LTBP3-220ENST00000532661 IGLC3P0DOY3 106 aa13.75□□□□□ -0.21
LTBP3-220ENST00000532661 GAGE10A6NGK3 116 aa13.74□□□□□ -0.21
LTBP3-220ENST00000532661 H3BRM9 83 aa13.74□□□□□ -0.21
LTBP3-220ENST00000532661 PMCHL1Q16048 86 aa13.74□□□□□ -0.21
LTBP3-220ENST00000532661 FAM19A2Q8N3H0 131 aa13.74□□□□□ -0.21
LTBP3-220ENST00000532661 S100A2P29034 98 aa13.73□□□□□ -0.21
LTBP3-220ENST00000532661 BCE1O60756 84 aa13.71□□□□□ -0.21
LTBP3-220ENST00000532661 ZNF22P17026 224 aaPredicted RBP13.71□□□□□ -0.21
LTBP3-220ENST00000532661 IGLV5-39A0A0G2JS06 123 aa13.7□□□□□ -0.22
LTBP3-220ENST00000532661 ATP5LO75964 103 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms