RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ERICH3Q5RHP9 1530 aa1.4□□□□□ -2.19
AC055878.1-201ENST00000531858 CNFNQ9BYD5 112 aa1.39□□□□□ -2.19
AC055878.1-201ENST00000531858 ALKQ9UM73 1620 aa1.39□□□□□ -2.19
AC055878.1-201ENST00000531858 ERCC6L2Q5T890 1561 aa1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 XRN1Q8IZH2 1706 aaKnown RBP1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 TMEM131LA2VDJ0 1609 aa1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 TARBP1Q13395 1621 aaKnown RBP1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 A0A0D9SG42 100 aa1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 TRBV7-4A0A0J9YYF1 115 aa1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 A0A1B0GU69 56 aa1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 UMAD1C9J7I0 102 aa1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 SMIM13P0DJ93 91 aa1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 SSBP3-AS1Q7Z2R9 100 aa1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 URB2Q14146 1524 aaKnown RBP1.38□□□□□ -2.19
AC055878.1-201ENST00000531858 TULP4Q9NRJ4 1543 aa1.37□□□□□ -2.19
AC055878.1-201ENST00000531858 NDUFB1O75438 58 aa1.37□□□□□ -2.19
AC055878.1-201ENST00000531858 DEFA5Q01523 94 aa1.37□□□□□ -2.19
AC055878.1-201ENST00000531858 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
AC055878.1-201ENST00000531858 MED13LQ71F56 2210 aa1.37□□□□□ -2.19
AC055878.1-201ENST00000531858 A0A0G2JMZ2 1700 aa1.37□□□□□ -2.19
AC055878.1-201ENST00000531858 DNMBPQ6XZF7 1577 aa1.36□□□□□ -2.19
AC055878.1-201ENST00000531858 KDM3BQ7LBC6 1761 aa1.36□□□□□ -2.19
AC055878.1-201ENST00000531858 LAMA4Q16363 1823 aa1.36□□□□□ -2.19
AC055878.1-201ENST00000531858 UGGT2Q9NYU1 1516 aa1.35□□□□□ -2.19
AC055878.1-201ENST00000531858 KNDC1Q76NI1 1749 aa1.35□□□□□ -2.19
AC055878.1-201ENST00000531858 SETBP1Q9Y6X0 1596 aa1.34□□□□□ -2.19
AC055878.1-201ENST00000531858 CLIP1P30622 1438 aa1.34□□□□□ -2.19
AC055878.1-201ENST00000531858 NHSL1Q5SYE7 1610 aa1.34□□□□□ -2.19
AC055878.1-201ENST00000531858 C5P01031 1676 aa1.34□□□□□ -2.19
AC055878.1-201ENST00000531858 ABCA1O95477 2261 aa1.34□□□□□ -2.2
AC055878.1-201ENST00000531858 CRYBG1Q9Y4K1 1723 aa1.34□□□□□ -2.2
AC055878.1-201ENST00000531858 DUOX2Q9NRD8 1548 aa1.34□□□□□ -2.2
AC055878.1-201ENST00000531858 LINC00959A0A1B0GUT2 108 aa1.33□□□□□ -2.2
AC055878.1-201ENST00000531858 HMGA1P17096 107 aaKnown RBP1.33□□□□□ -2.2
AC055878.1-201ENST00000531858 F5P12259 2224 aa1.33□□□□□ -2.2
AC055878.1-201ENST00000531858 IFI27P40305 119 aaPredicted RBP1.32□□□□□ -2.2
AC055878.1-201ENST00000531858 COX6A2Q02221 97 aa1.32□□□□□ -2.2
AC055878.1-201ENST00000531858 PIGYQ3MUY2 71 aa1.32□□□□□ -2.2
AC055878.1-201ENST00000531858 HEPN1Q6WQI6 88 aa1.32□□□□□ -2.2
AC055878.1-201ENST00000531858 TP53AIP1Q9HCN2 124 aa1.32□□□□□ -2.2
AC055878.1-201ENST00000531858 I3L2K1 104 aa1.31□□□□□ -2.2
AC055878.1-201ENST00000531858 DEFB123Q8N688 67 aa1.31□□□□□ -2.2
AC055878.1-201ENST00000531858 MAGI3Q5TCQ9 1506 aa1.3□□□□□ -2.2
AC055878.1-201ENST00000531858 DEFB112Q30KQ8 113 aa1.3□□□□□ -2.2
AC055878.1-201ENST00000531858 Q5BKY6 102 aa1.3□□□□□ -2.2
AC055878.1-201ENST00000531858 FAM103A1Q9BTL3 118 aaKnown RBP1.3□□□□□ -2.2
AC055878.1-201ENST00000531858 MYO7BQ6PIF6 2116 aa1.3□□□□□ -2.2
AC055878.1-201ENST00000531858 LAMC1P11047 1609 aa1.29□□□□□ -2.2
AC055878.1-201ENST00000531858 MYH4Q9Y623 1939 aa1.29□□□□□ -2.2
AC055878.1-201ENST00000531858 CD163L1Q9NR16 1453 aa1.29□□□□□ -2.2
AC055878.1-201ENST00000531858 CEP170BQ9Y4F5 1589 aaPredicted RBP1.29□□□□□ -2.2
AC055878.1-201ENST00000531858 LRRIQ1Q96JM4 1722 aa1.29□□□□□ -2.2
AC055878.1-201ENST00000531858 A0A087WXM4 84 aa1.28□□□□□ -2.2
AC055878.1-201ENST00000531858 ANKRD50Q9ULJ7 1429 aa1.28□□□□□ -2.2
AC055878.1-201ENST00000531858 ADAMTS12P58397 1594 aa1.28□□□□□ -2.2
AC055878.1-201ENST00000531858 LRRC37AA6NMS7 1700 aa1.28□□□□□ -2.2
AC055878.1-201ENST00000531858 RGPD8O14715 1765 aaPredicted RBP1.28□□□□□ -2.2
AC055878.1-201ENST00000531858 RGPD5Q99666 1765 aa1.28□□□□□ -2.2
AC055878.1-201ENST00000531858 PPRC1Q5VV67 1664 aaKnown RBP1.27□□□□□ -2.21
AC055878.1-201ENST00000531858 SLIT1O75093 1534 aa1.27□□□□□ -2.21
AC055878.1-201ENST00000531858 TRAV21A0A0B4J279 112 aa1.27□□□□□ -2.21
AC055878.1-201ENST00000531858 USMG5Q96IX5 58 aa1.27□□□□□ -2.21
AC055878.1-201ENST00000531858 GAFA1Q96PS6 74 aa1.27□□□□□ -2.21
AC055878.1-201ENST00000531858 PAPPA2Q9BXP8 1791 aa1.26□□□□□ -2.21
AC055878.1-201ENST00000531858 PIK3C2BO00750 1634 aa1.26□□□□□ -2.21
AC055878.1-201ENST00000531858 KIAA0556O60303 1618 aa1.26□□□□□ -2.21
AC055878.1-201ENST00000531858 LRRC7Q96NW7 1537 aa1.26□□□□□ -2.21
AC055878.1-201ENST00000531858 ZFHX3Q15911 3703 aa1.26□□□□□ -2.21
AC055878.1-201ENST00000531858 COL6A6A6NMZ7 2263 aa1.26□□□□□ -2.21
AC055878.1-201ENST00000531858 LCE6AA0A183 80 aa1.25□□□□□ -2.21
AC055878.1-201ENST00000531858 COX7BP24311 80 aa1.25□□□□□ -2.21
AC055878.1-201ENST00000531858 KNTC1P50748 2209 aa1.25□□□□□ -2.21
AC055878.1-201ENST00000531858 USP32Q8NFA0 1604 aa1.25□□□□□ -2.21
AC055878.1-201ENST00000531858 ROS1P08922 2347 aa1.24□□□□□ -2.21
AC055878.1-201ENST00000531858 KIF20BQ96Q89 1820 aa1.24□□□□□ -2.21
AC055878.1-201ENST00000531858 ZDBF2Q9HCK1 2354 aa1.24□□□□□ -2.21
AC055878.1-201ENST00000531858 RPL38P63173 70 aaKnown RBP1.24□□□□□ -2.21
AC055878.1-201ENST00000531858 Q8IZM0 81 aa1.24□□□□□ -2.21
AC055878.1-201ENST00000531858 PRO0255Q9UI72 69 aa1.24□□□□□ -2.21
AC055878.1-201ENST00000531858 PAPPAQ13219 1627 aa1.24□□□□□ -2.21
AC055878.1-201ENST00000531858 RGPD2P0DJD1 1756 aa1.24□□□□□ -2.21
AC055878.1-201ENST00000531858 IQGAP3Q86VI3 1631 aa1.23□□□□□ -2.21
AC055878.1-201ENST00000531858 WFDC9Q8NEX5 89 aa1.23□□□□□ -2.21
AC055878.1-201ENST00000531858 EFCAB5A4FU69 1503 aa1.23□□□□□ -2.21
AC055878.1-201ENST00000531858 MYO5CQ9NQX4 1742 aa1.23□□□□□ -2.21
AC055878.1-201ENST00000531858 PLXNB2O15031 1838 aa1.22□□□□□ -2.21
AC055878.1-201ENST00000531858 A0A087WWC5 75 aa1.22□□□□□ -2.21
AC055878.1-201ENST00000531858 IFI6P09912 130 aa1.22□□□□□ -2.21
AC055878.1-201ENST00000531858 PRB3Q04118 309 aaPredicted RBP1.22□□□□□ -2.21
AC055878.1-201ENST00000531858 PKD1L3Q7Z443 1732 aa1.22□□□□□ -2.21
AC055878.1-201ENST00000531858 HFM1A2PYH4 1435 aa1.22□□□□□ -2.21
AC055878.1-201ENST00000531858 ZC3H13Q5T200 1668 aaKnown RBP1.21□□□□□ -2.22
AC055878.1-201ENST00000531858 SPTY2D1-AS1A0A0U1RR47 76 aa1.21□□□□□ -2.22
AC055878.1-201ENST00000531858 COX8AP10176 69 aa1.21□□□□□ -2.22
AC055878.1-201ENST00000531858 CRIPTQ9P021 101 aa1.21□□□□□ -2.22
AC055878.1-201ENST00000531858 JMJD1CQ15652 2540 aa1.21□□□□□ -2.22
AC055878.1-201ENST00000531858 MUC6Q6W4X9 2439 aa1.2□□□□□ -2.22
AC055878.1-201ENST00000531858 DNAJC13O75165 2243 aa1.2□□□□□ -2.22
AC055878.1-201ENST00000531858 K7EQZ3 153 aa1.2□□□□□ -2.22
AC055878.1-201ENST00000531858 Q5VSD8 79 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms