RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TEX43Q6ZNM6 134 aa5.29□□□□□ -1.56
USF1-210ENST00000531842 URB1-AS1Q96HZ7 61 aa5.29□□□□□ -1.56
USF1-210ENST00000531842 YPEL4Q96NS1 127 aa5.29□□□□□ -1.56
USF1-210ENST00000531842 GNB1LQ9BYB4 327 aa5.29□□□□□ -1.56
USF1-210ENST00000531842 A0A087X002 238 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 TRBV30A0A0K0K1B3 111 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 NDUFC2-KCTD14E9PQ53 114 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 Q6ZN92 141 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 FAM19A3Q7Z5A8 133 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 C2orf88Q9BSF0 95 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 RPS10P5Q9NQ39 176 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
USF1-210ENST00000531842 A0A096LNJ9 63 aa5.27□□□□□ -1.57
USF1-210ENST00000531842 CKS1BP61024 79 aa5.27□□□□□ -1.57
USF1-210ENST00000531842 RHEBQ15382 184 aa5.27□□□□□ -1.57
USF1-210ENST00000531842 ORMDL2Q53FV1 153 aa5.27□□□□□ -1.57
USF1-210ENST00000531842 TOMM6Q96B49 74 aa5.27□□□□□ -1.57
USF1-210ENST00000531842 VCX2Q9H322 139 aa5.27□□□□□ -1.57
USF1-210ENST00000531842 NXT2Q9NPJ8 142 aaKnown RBP5.27□□□□□ -1.57
USF1-210ENST00000531842 TOMM7Q9P0U1 55 aa5.27□□□□□ -1.57
USF1-210ENST00000531842 RPL13AP40429 203 aaKnown RBP5.26□□□□□ -1.57
USF1-210ENST00000531842 C6orf226Q5I0X4 101 aa5.26□□□□□ -1.57
USF1-210ENST00000531842 C9orf129Q5T035 196 aaKnown RBP5.26□□□□□ -1.57
USF1-210ENST00000531842 LINC00469Q8N7U9 141 aa5.26□□□□□ -1.57
USF1-210ENST00000531842 MRPL18Q9H0U6 180 aaKnown RBP5.26□□□□□ -1.57
USF1-210ENST00000531842 CYSLTR1Q9Y271 337 aa5.26□□□□□ -1.57
USF1-210ENST00000531842 K7EMI3 77 aa5.25□□□□□ -1.57
USF1-210ENST00000531842 APOC3P02656 99 aa5.25□□□□□ -1.57
USF1-210ENST00000531842 NPSP0C0P6 89 aa5.25□□□□□ -1.57
USF1-210ENST00000531842 LBHQ53QV2 105 aaPredicted RBP5.25□□□□□ -1.57
USF1-210ENST00000531842 LINC01561Q8N1V8 128 aa5.25□□□□□ -1.57
USF1-210ENST00000531842 ZNF861PO60384 105 aa5.24□□□□□ -1.57
USF1-210ENST00000531842 S100PP25815 95 aa5.24□□□□□ -1.57
USF1-210ENST00000531842 FABP9Q0Z7S8 132 aa5.24□□□□□ -1.57
USF1-210ENST00000531842 TIMM17AQ99595 171 aa5.24□□□□□ -1.57
USF1-210ENST00000531842 XAGE1AQ9HD64 81 aa5.24□□□□□ -1.57
USF1-210ENST00000531842 CDKN2A-AS1Q9UH64 79 aa5.24□□□□□ -1.57
USF1-210ENST00000531842 C22orf24Q9Y442 160 aa5.24□□□□□ -1.57
USF1-210ENST00000531842 PAPPA-AS1Q5QFB9 102 aa5.23□□□□□ -1.57
USF1-210ENST00000531842 LCE2DQ5TA82 110 aaPredicted RBP5.23□□□□□ -1.57
USF1-210ENST00000531842 ERASQ7Z444 233 aa5.23□□□□□ -1.57
USF1-210ENST00000531842 C18orf32Q8TCD1 76 aa5.23□□□□□ -1.57
USF1-210ENST00000531842 KRTAP4-1Q9BYQ7 146 aa5.23□□□□□ -1.57
USF1-210ENST00000531842 GEMIN7Q9H840 131 aaKnown RBP5.23□□□□□ -1.57
USF1-210ENST00000531842 NUPR1O60356 82 aa5.22□□□□□ -1.57
USF1-210ENST00000531842 HERVK_113P63121 156 aa5.22□□□□□ -1.57
USF1-210ENST00000531842 SEC11AP67812 179 aa5.22□□□□□ -1.57
USF1-210ENST00000531842 KRTAP13-2Q52LG2 175 aa5.22□□□□□ -1.57
USF1-210ENST00000531842 Q8IZM0 81 aa5.22□□□□□ -1.57
USF1-210ENST00000531842 SLC7A5P1Q8MH63 180 aa5.22□□□□□ -1.57
USF1-210ENST00000531842 CST9LQ9H4G1 147 aa5.22□□□□□ -1.57
USF1-210ENST00000531842 IGLV5-45A0A087WSX0 123 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 F8VRH5 84 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 SNAPINO95295 136 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 G0S2P27469 103 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 RPL28P46779 137 aaKnown RBP5.21□□□□□ -1.58
USF1-210ENST00000531842 PMCHL1Q16048 86 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 COX19Q49B96 90 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 CBLN2Q8IUK8 224 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 SVBPQ8N300 66 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 TYMSOSQ8TAI1 123 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 SCGB3A1Q96QR1 104 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 CDIP1Q9H305 208 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 TRAPPC1Q9Y5R8 145 aa5.21□□□□□ -1.58
USF1-210ENST00000531842 RPL37AP8A6NKH3 93 aa5.2□□□□□ -1.58
USF1-210ENST00000531842 SMIM1B2RUZ4 78 aa5.2□□□□□ -1.58
USF1-210ENST00000531842 BCE1O60756 84 aa5.2□□□□□ -1.58
USF1-210ENST00000531842 PDZD11Q5EBL8 140 aa5.2□□□□□ -1.58
USF1-210ENST00000531842 MRPL55Q7Z7F7 128 aaKnown RBP5.2□□□□□ -1.58
USF1-210ENST00000531842 TMA7Q9Y2S6 64 aaKnown RBP5.2□□□□□ -1.58
USF1-210ENST00000531842 TINCRA0A1B0GVN0 87 aa5.19□□□□□ -1.58
USF1-210ENST00000531842 GAGE10A6NGK3 116 aa5.19□□□□□ -1.58
USF1-210ENST00000531842 LINC00614P0C842 121 aa5.19□□□□□ -1.58
USF1-210ENST00000531842 CRYGAP11844 174 aa5.19□□□□□ -1.58
USF1-210ENST00000531842 CXCL5P42830 114 aa5.18□□□□□ -1.58
USF1-210ENST00000531842 LINC00310P59036 64 aa5.18□□□□□ -1.58
USF1-210ENST00000531842 RAB5BP61020 215 aa5.18□□□□□ -1.58
USF1-210ENST00000531842 FA2HQ7L5A8 372 aa5.18□□□□□ -1.58
USF1-210ENST00000531842 TP73-AS1Q9UF72 201 aa5.18□□□□□ -1.58
USF1-210ENST00000531842 IGLV7-46A0A075B6I9 117 aa5.17□□□□□ -1.58
USF1-210ENST00000531842 IGLC3P0DOY3 106 aa5.17□□□□□ -1.58
USF1-210ENST00000531842 UBE2AP49459 152 aa5.17□□□□□ -1.58
USF1-210ENST00000531842 PMVKQ15126 192 aa5.17□□□□□ -1.58
USF1-210ENST00000531842 NKAPP1Q8N9T2 125 aa5.17□□□□□ -1.58
USF1-210ENST00000531842 COX7B2Q8TF08 81 aa5.17□□□□□ -1.58
USF1-210ENST00000531842 LINC00167Q96N53 147 aa5.17□□□□□ -1.58
USF1-210ENST00000531842 IGLV5-39A0A0G2JS06 123 aa5.16□□□□□ -1.58
USF1-210ENST00000531842 SPINK8P0C7L1 97 aa5.16□□□□□ -1.58
USF1-210ENST00000531842 NDUFA5Q16718 116 aa5.16□□□□□ -1.58
USF1-210ENST00000531842 TPRXLQ17RH7 258 aa5.16□□□□□ -1.58
USF1-210ENST00000531842 C11orf86A6NJI1 115 aa5.15□□□□□ -1.59
USF1-210ENST00000531842 HBDP02042 147 aa5.15□□□□□ -1.59
USF1-210ENST00000531842 TRGC2P03986 189 aa5.15□□□□□ -1.59
USF1-210ENST00000531842 ZNF22P17026 224 aaPredicted RBP5.15□□□□□ -1.59
USF1-210ENST00000531842 SMCO4Q9NRQ5 59 aa5.15□□□□□ -1.59
USF1-210ENST00000531842 LINC01549A6NIU2 74 aa5.14□□□□□ -1.59
USF1-210ENST00000531842 COLCA2A8K830 154 aa5.14□□□□□ -1.59
USF1-210ENST00000531842 ATP5LO75964 103 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms