RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TIRAPP58753 221 aa8.82□□□□□ -1
SCN3B-206ENST00000530277 SDIM1Q6ZPB5 146 aa8.82□□□□□ -1
SCN3B-206ENST00000530277 FHL3Q13643 280 aa8.82□□□□□ -1
SCN3B-206ENST00000530277 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
SCN3B-206ENST00000530277 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
SCN3B-206ENST00000530277 RETNQ9HD89 108 aa8.82□□□□□ -1
SCN3B-206ENST00000530277 NTM-AS1Q6ZSK4 140 aa8.81□□□□□ -1
SCN3B-206ENST00000530277 C11orf72Q8NBR9 251 aa8.81□□□□□ -1
SCN3B-206ENST00000530277 AMELXQ99217 191 aa8.81□□□□□ -1
SCN3B-206ENST00000530277 C1orf43Q9BWL3 253 aa8.81□□□□□ -1
SCN3B-206ENST00000530277 PPDPFQ9H3Y8 114 aa8.81□□□□□ -1
SCN3B-206ENST00000530277 TRBV6-4A0A1B0GX49 114 aa8.81□□□□□ -1
SCN3B-206ENST00000530277 EIF4EBP3O60516 100 aaPredicted RBP8.81□□□□□ -1
SCN3B-206ENST00000530277 NKAPP1Q8N9T2 125 aa8.81□□□□□ -1
SCN3B-206ENST00000530277 NSD1Q96L73 2696 aaPredicted RBP8.81□□□□□ -1
SCN3B-206ENST00000530277 LINC00959A0A1B0GUT2 108 aa8.8□□□□□ -1
SCN3B-206ENST00000530277 MXRA5Q9NR99 2828 aa8.8□□□□□ -1
SCN3B-206ENST00000530277 CCL18P55774 89 aa8.8□□□□□ -1
SCN3B-206ENST00000530277 Q8N2B8 174 aa8.8□□□□□ -1
SCN3B-206ENST00000530277 OVOL2Q9BRP0 275 aa8.8□□□□□ -1
SCN3B-206ENST00000530277 C6orf99Q4VX62 202 aa8.8□□□□□ -1
SCN3B-206ENST00000530277 UBL5Q9BZL1 73 aa8.8□□□□□ -1
SCN3B-206ENST00000530277 HIVEP1P15822 2718 aa8.79□□□□□ -1
SCN3B-206ENST00000530277 SMIM11BQ8TCY0 68 aa8.79□□□□□ -1
SCN3B-206ENST00000530277 A8MTW9 85 aa8.79□□□□□ -1
SCN3B-206ENST00000530277 HILS1P60008 231 aa8.79□□□□□ -1
SCN3B-206ENST00000530277 Q8N3U1 123 aa8.79□□□□□ -1
SCN3B-206ENST00000530277 LST1O00453 97 aa8.79□□□□□ -1
SCN3B-206ENST00000530277 IGLV1-51P01701 117 aa8.79□□□□□ -1
SCN3B-206ENST00000530277 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.78□□□□□ -1
SCN3B-206ENST00000530277 hADV29S1A0JD25 119 aa8.78□□□□□ -1
SCN3B-206ENST00000530277 PRO0461Q9UI25 63 aa8.78□□□□□ -1
SCN3B-206ENST00000530277 SCXQ7RTU7 201 aa8.78□□□□□ -1
SCN3B-206ENST00000530277 DSCR8Q96T75 97 aa8.78□□□□□ -1
SCN3B-206ENST00000530277 A0A1B0GX51 115 aa8.77□□□□□ -1.01
SCN3B-206ENST00000530277 LINC01546A6NGU7 62 aa8.77□□□□□ -1.01
SCN3B-206ENST00000530277 H0YGX0 51 aa8.77□□□□□ -1.01
SCN3B-206ENST00000530277 BRI3O95415 125 aa8.77□□□□□ -1.01
SCN3B-206ENST00000530277 SPANXDQ9BXN6 97 aa8.77□□□□□ -1.01
SCN3B-206ENST00000530277 TMEM126AQ9H061 195 aa8.76□□□□□ -1.01
SCN3B-206ENST00000530277 FHL2Q14192 279 aa8.76□□□□□ -1.01
SCN3B-206ENST00000530277 APCP25054 2843 aa8.76□□□□□ -1.01
SCN3B-206ENST00000530277 UNQ6190/PRO20217Q6UXQ8 127 aa8.76□□□□□ -1.01
SCN3B-206ENST00000530277 WFDC9Q8NEX5 89 aa8.75□□□□□ -1.01
SCN3B-206ENST00000530277 NIPBLQ6KC79 2804 aaeCLIP8.75□□□□□ -1.01
SCN3B-206ENST00000530277 TRACP01848 142 aa8.75□□□□□ -1.01
SCN3B-206ENST00000530277 C6orf223Q8N319 242 aa8.75□□□□□ -1.01
SCN3B-206ENST00000530277 TRAV23DV6A0A075B6W5 121 aa8.74□□□□□ -1.01
SCN3B-206ENST00000530277 BEAN1Q3B7T3 259 aa8.74□□□□□ -1.01
SCN3B-206ENST00000530277 A0A087WYN8 130 aa8.73□□□□□ -1.01
SCN3B-206ENST00000530277 IGKV2-24A0A0C4DH68 120 aa8.73□□□□□ -1.01
SCN3B-206ENST00000530277 IBA57-AS1B1ANH7 110 aa8.73□□□□□ -1.01
SCN3B-206ENST00000530277 IGHV4-30-4P0DP06 118 aa8.73□□□□□ -1.01
SCN3B-206ENST00000530277 SOSTDC1Q6X4U4 206 aa8.73□□□□□ -1.01
SCN3B-206ENST00000530277 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.01
SCN3B-206ENST00000530277 IGKV2D-28P01615 120 aa8.71□□□□□ -1.01
SCN3B-206ENST00000530277 LINC00337Q8N6G1 96 aa8.71□□□□□ -1.01
SCN3B-206ENST00000530277 UBE2BP63146 152 aa8.7□□□□□ -1.02
SCN3B-206ENST00000530277 A0A087WVE0 104 aa8.7□□□□□ -1.02
SCN3B-206ENST00000530277 DEFB131BA0A096LNP1 70 aa8.69□□□□□ -1.02
SCN3B-206ENST00000530277 CYSRT1A8MQ03 144 aa8.69□□□□□ -1.02
SCN3B-206ENST00000530277 Q6ZQY7 126 aa8.69□□□□□ -1.02
SCN3B-206ENST00000530277 BAHCC1Q9P281 2608 aa8.69□□□□□ -1.02
SCN3B-206ENST00000530277 KPRPQ5T749 579 aaPredicted RBP8.69□□□□□ -1.02
SCN3B-206ENST00000530277 A0A096LNI7 61 aa8.69□□□□□ -1.02
SCN3B-206ENST00000530277 NANOS2P60321 138 aaKnown RBP8.69□□□□□ -1.02
SCN3B-206ENST00000530277 LYRM9A8MSI8 78 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 J3KT08 172 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 TIMM17BO60830 172 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 CXCL5P42830 114 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 RBM3P98179 157 aaKnown RBP8.68□□□□□ -1.02
SCN3B-206ENST00000530277 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 CELA1Q9UNI1 258 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 ACYP1P07311 99 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 LINC00643Q86TS7 51 aa8.68□□□□□ -1.02
SCN3B-206ENST00000530277 HRCT1Q6UXD1 115 aa8.67□□□□□ -1.02
SCN3B-206ENST00000530277 DIRC1Q969H9 104 aa8.67□□□□□ -1.02
SCN3B-206ENST00000530277 ENHOQ6UWT2 76 aa8.66□□□□□ -1.02
SCN3B-206ENST00000530277 A0A087WZ39 114 aa8.66□□□□□ -1.02
SCN3B-206ENST00000530277 A0A096LNT2 108 aa8.66□□□□□ -1.02
SCN3B-206ENST00000530277 KLK9Q2XQG4 91 aa8.66□□□□□ -1.02
SCN3B-206ENST00000530277 FAM218AQ96MZ4 157 aa8.66□□□□□ -1.02
SCN3B-206ENST00000530277 Q6ZTC4 211 aa8.66□□□□□ -1.02
SCN3B-206ENST00000530277 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.65□□□□□ -1.02
SCN3B-206ENST00000530277 GHRHP01286 108 aa8.65□□□□□ -1.02
SCN3B-206ENST00000530277 SMIM9A6NGZ8 99 aa8.65□□□□□ -1.02
SCN3B-206ENST00000530277 NHLRC4P0CG21 123 aaPredicted RBP8.65□□□□□ -1.02
SCN3B-206ENST00000530277 A0A0U1RQV1 116 aa8.65□□□□□ -1.03
SCN3B-206ENST00000530277 ETDCA0A1B0GVM5 59 aa8.65□□□□□ -1.03
SCN3B-206ENST00000530277 RPL37AP8A6NKH3 93 aa8.64□□□□□ -1.03
SCN3B-206ENST00000530277 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
SCN3B-206ENST00000530277 F8WEM9 126 aa8.64□□□□□ -1.03
SCN3B-206ENST00000530277 TMEM256-PLSCR3K7ERE1 68 aa8.64□□□□□ -1.03
SCN3B-206ENST00000530277 C20orf197Q8N268 126 aa8.64□□□□□ -1.03
SCN3B-206ENST00000530277 MIFP14174 115 aa8.63□□□□□ -1.03
SCN3B-206ENST00000530277 FAM19A5Q7Z5A7 132 aaPredicted RBP8.63□□□□□ -1.03
SCN3B-206ENST00000530277 A0A0J9YWU9 116 aa8.63□□□□□ -1.03
SCN3B-206ENST00000530277 WFDC10BQ8IUB3 73 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms