RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 KNDC1Q76NI1 1749 aa0.86□□□□□ -2.27
CAPRIN1-208ENST00000530008 MYO5CQ9NQX4 1742 aa0.86□□□□□ -2.27
CAPRIN1-208ENST00000530008 CCDC88BA6NC98 1476 aa0.86□□□□□ -2.27
CAPRIN1-208ENST00000530008 FANCAO15360 1455 aa0.86□□□□□ -2.27
CAPRIN1-208ENST00000530008 NLRP1Q9C000 1473 aa0.86□□□□□ -2.27
CAPRIN1-208ENST00000530008 PLIN4Q96Q06 1357 aa0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 ZC3H13Q5T200 1668 aaKnown RBP0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 TRBV25-1A0A075B6N4 114 aa0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 ADAMTS12P58397 1594 aa0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 Q5BKY6 102 aa0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 FDCSPQ8NFU4 85 aa0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 PSENENQ9NZ42 101 aa0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 RRBP1Q9P2E9 1410 aaKnown RBP0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 PAPPA2Q9BXP8 1791 aa0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 NHSL1Q5SYE7 1610 aa0.85□□□□□ -2.27
CAPRIN1-208ENST00000530008 NEXMIFQ5QGS0 1516 aa0.84□□□□□ -2.27
CAPRIN1-208ENST00000530008 RGPD8O14715 1765 aaPredicted RBP0.84□□□□□ -2.27
CAPRIN1-208ENST00000530008 RGPD5Q99666 1765 aa0.84□□□□□ -2.27
CAPRIN1-208ENST00000530008 F8WEM9 126 aa0.84□□□□□ -2.27
CAPRIN1-208ENST00000530008 PMCHL1Q16048 86 aa0.84□□□□□ -2.27
CAPRIN1-208ENST00000530008 S100A13Q99584 98 aa0.84□□□□□ -2.27
CAPRIN1-208ENST00000530008 ST20Q9HBF5 79 aa0.84□□□□□ -2.27
CAPRIN1-208ENST00000530008 ZNF831Q5JPB2 1677 aa0.84□□□□□ -2.28
CAPRIN1-208ENST00000530008 CRYBG1Q9Y4K1 1723 aa0.84□□□□□ -2.28
CAPRIN1-208ENST00000530008 ABCA8O94911 1581 aa0.83□□□□□ -2.28
CAPRIN1-208ENST00000530008 I3L2K1 104 aa0.83□□□□□ -2.28
CAPRIN1-208ENST00000530008 BVES-AS1Q5T3Y7 98 aa0.83□□□□□ -2.28
CAPRIN1-208ENST00000530008 ITSN1Q15811 1721 aa0.83□□□□□ -2.28
CAPRIN1-208ENST00000530008 SHPRHQ149N8 1683 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 A0A087WVE0 104 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 H3BUT2 72 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 IGLC2P0DOY2 106 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 IGLC3P0DOY3 106 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 ADIRFQ15847 76 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 PSMG4Q5JS54 123 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 SCN11AQ9UI33 1791 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 APCP25054 2843 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 BDP1A6H8Y1 2624 aa0.82□□□□□ -2.28
CAPRIN1-208ENST00000530008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 TRBV6-1A0A0K0K1D8 114 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 C7orf77A4D0Y5 90 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 IQCF6A8MYZ5 107 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 Q8IZM0 81 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 LINC01600Q96MT4 127 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 RABAC1Q9UI14 185 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 MADDQ8WXG6 1647 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 ZFHX3Q15911 3703 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 C5P01031 1676 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 RGPD1P0DJD0 1748 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 PKD1L3Q7Z443 1732 aa0.81□□□□□ -2.28
CAPRIN1-208ENST00000530008 UGGT2Q9NYU1 1516 aa0.8□□□□□ -2.28
CAPRIN1-208ENST00000530008 CFAP74Q9C0B2 1584 aa0.8□□□□□ -2.28
CAPRIN1-208ENST00000530008 TARBP1Q13395 1621 aaKnown RBP0.8□□□□□ -2.28
CAPRIN1-208ENST00000530008 SPINK1P00995 79 aa0.8□□□□□ -2.28
CAPRIN1-208ENST00000530008 ARMS2P0C7Q2 107 aa0.8□□□□□ -2.28
CAPRIN1-208ENST00000530008 SNRPFP62306 86 aaKnown RBP0.8□□□□□ -2.28
CAPRIN1-208ENST00000530008 LINC00846Q9NV44 126 aa0.8□□□□□ -2.28
CAPRIN1-208ENST00000530008 UBR3Q6ZT12 1888 aa0.8□□□□□ -2.28
CAPRIN1-208ENST00000530008 CCDC141Q6ZP82 1450 aa0.8□□□□□ -2.28
CAPRIN1-208ENST00000530008 ERICH3Q5RHP9 1530 aa0.79□□□□□ -2.28
CAPRIN1-208ENST00000530008 PTPN23Q9H3S7 1636 aa0.79□□□□□ -2.28
CAPRIN1-208ENST00000530008 CFDP00746 253 aaPredicted RBP0.79□□□□□ -2.28
CAPRIN1-208ENST00000530008 HMGN2P05204 90 aaKnown RBP0.79□□□□□ -2.28
CAPRIN1-208ENST00000530008 DEFA5Q01523 94 aa0.79□□□□□ -2.28
CAPRIN1-208ENST00000530008 LINC00643Q86TS7 51 aa0.79□□□□□ -2.28
CAPRIN1-208ENST00000530008 CACNA1EQ15878 2313 aa0.79□□□□□ -2.28
CAPRIN1-208ENST00000530008 CLIP1P30622 1438 aa0.79□□□□□ -2.28
CAPRIN1-208ENST00000530008 BIVM-ERCC5R4GMW8 1640 aa0.78□□□□□ -2.28
CAPRIN1-208ENST00000530008 FAM208BQ5VWN6 2430 aa0.78□□□□□ -2.28
CAPRIN1-208ENST00000530008 PDCD5O14737 125 aa0.78□□□□□ -2.28
CAPRIN1-208ENST00000530008 LEPROTL1O95214 131 aa0.78□□□□□ -2.28
CAPRIN1-208ENST00000530008 DEFB107AQ8IZN7 70 aa0.78□□□□□ -2.28
CAPRIN1-208ENST00000530008 C18orf32Q8TCD1 76 aa0.78□□□□□ -2.28
CAPRIN1-208ENST00000530008 SMCO4Q9NRQ5 59 aa0.78□□□□□ -2.28
CAPRIN1-208ENST00000530008 IQSEC2Q5JU85 1478 aa0.78□□□□□ -2.28
CAPRIN1-208ENST00000530008 CEP170BQ9Y4F5 1589 aaPredicted RBP0.78□□□□□ -2.29
CAPRIN1-208ENST00000530008 MYMXA0A1B0GTQ4 84 aa0.77□□□□□ -2.29
CAPRIN1-208ENST00000530008 KANTRA0A1W2PQU2 76 aa0.77□□□□□ -2.29
CAPRIN1-208ENST00000530008 NCOA2Q15596 1464 aa0.77□□□□□ -2.29
CAPRIN1-208ENST00000530008 C1orf167Q5SNV9 1468 aa0.77□□□□□ -2.29
CAPRIN1-208ENST00000530008 MROH1Q8NDA8 1641 aa0.77□□□□□ -2.29
CAPRIN1-208ENST00000530008 ALKQ9UM73 1620 aa0.77□□□□□ -2.29
CAPRIN1-208ENST00000530008 COL14A1Q05707 1796 aaKnown RBP0.77□□□□□ -2.29
CAPRIN1-208ENST00000530008 TENM3Q9P273 2699 aa0.77□□□□□ -2.29
CAPRIN1-208ENST00000530008 TIAM2Q8IVF5 1701 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 XRN1Q8IZH2 1706 aaKnown RBP0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 PARP4Q9UKK3 1724 aaKnown RBP0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 PIK3C2BO00750 1634 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 CUX1P39880 1505 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 ABCC2Q92887 1545 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 ANKARQ7Z5J8 1434 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 D6R8Y8 96 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 SMIM11AP58511 58 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 PIGYQ3MUY2 71 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 C6orf201Q7Z4U5 140 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 MUSTN1Q8IVN3 82 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 ABCA12Q86UK0 2595 aa0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 TPRP12270 2363 aaKnown RBP0.76□□□□□ -2.29
CAPRIN1-208ENST00000530008 BCORQ6W2J9 1755 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms