RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 RPL18AQ02543 176 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-215ENST00000529745 Q8IZM0 81 aa9.62□□□□□ -0.87
CCDC90B-215ENST00000529745 C9orf116Q5BN46 136 aaPredicted RBP9.61□□□□□ -0.87
CCDC90B-215ENST00000529745 Q6ZRP5 223 aa9.61□□□□□ -0.87
CCDC90B-215ENST00000529745 FA2HQ7L5A8 372 aa9.61□□□□□ -0.87
CCDC90B-215ENST00000529745 IGLV5-45A0A087WSX0 123 aa9.6□□□□□ -0.87
CCDC90B-215ENST00000529745 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
CCDC90B-215ENST00000529745 C18orf32Q8TCD1 76 aa9.6□□□□□ -0.87
CCDC90B-215ENST00000529745 YPEL4Q96NS1 127 aa9.6□□□□□ -0.87
CCDC90B-215ENST00000529745 SMCO4Q9NRQ5 59 aa9.6□□□□□ -0.87
CCDC90B-215ENST00000529745 CDKN2A-AS1Q9UH64 79 aa9.6□□□□□ -0.87
CCDC90B-215ENST00000529745 TRAPPC1Q9Y5R8 145 aa9.6□□□□□ -0.87
CCDC90B-215ENST00000529745 URB1-AS1Q96HZ7 61 aa9.59□□□□□ -0.87
CCDC90B-215ENST00000529745 GEMIN7Q9H840 131 aaKnown RBP9.59□□□□□ -0.87
CCDC90B-215ENST00000529745 A0A096LNJ9 63 aa9.58□□□□□ -0.88
CCDC90B-215ENST00000529745 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
CCDC90B-215ENST00000529745 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
CCDC90B-215ENST00000529745 PACRGQ96M98 296 aaPredicted RBP9.58□□□□□ -0.88
CCDC90B-215ENST00000529745 PRSS2P07478 247 aa9.57□□□□□ -0.88
CCDC90B-215ENST00000529745 LINC00614P0C842 121 aa9.57□□□□□ -0.88
CCDC90B-215ENST00000529745 PMVKQ15126 192 aa9.57□□□□□ -0.88
CCDC90B-215ENST00000529745 CST9LQ9H4G1 147 aa9.57□□□□□ -0.88
CCDC90B-215ENST00000529745 SMIM1B2RUZ4 78 aa9.56□□□□□ -0.88
CCDC90B-215ENST00000529745 MT1HL1P0DM35 61 aa9.56□□□□□ -0.88
CCDC90B-215ENST00000529745 CXCL5P42830 114 aa9.56□□□□□ -0.88
CCDC90B-215ENST00000529745 SRSF9Q13242 221 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCDC90B-215ENST00000529745 ODF1Q14990 250 aa9.56□□□□□ -0.88
CCDC90B-215ENST00000529745 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
CCDC90B-215ENST00000529745 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
CCDC90B-215ENST00000529745 PDZD11Q5EBL8 140 aa9.55□□□□□ -0.88
CCDC90B-215ENST00000529745 TOMM7Q9P0U1 55 aa9.55□□□□□ -0.88
CCDC90B-215ENST00000529745 HBDP02042 147 aa9.54□□□□□ -0.88
CCDC90B-215ENST00000529745 RAB5BP61020 215 aa9.54□□□□□ -0.88
CCDC90B-215ENST00000529745 CKS1BP61024 79 aa9.54□□□□□ -0.88
CCDC90B-215ENST00000529745 LINC00469Q8N7U9 141 aa9.54□□□□□ -0.88
CCDC90B-215ENST00000529745 F8VRH5 84 aa9.53□□□□□ -0.88
CCDC90B-215ENST00000529745 PHF5AQ7RTV0 110 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-215ENST00000529745 KRTAP7-1Q8IUC3 87 aa9.53□□□□□ -0.88
CCDC90B-215ENST00000529745 PSORS1C2Q9UIG4 136 aa9.53□□□□□ -0.88
CCDC90B-215ENST00000529745 LRP2P98164 4655 aa9.53□□□□□ -0.88
CCDC90B-215ENST00000529745 IGLC3P0DOY3 106 aa9.52□□□□□ -0.89
CCDC90B-215ENST00000529745 GAGE2EQ4V326 116 aa9.52□□□□□ -0.89
CCDC90B-215ENST00000529745 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-215ENST00000529745 GAGE2DQ9UEU5 116 aa9.52□□□□□ -0.89
CCDC90B-215ENST00000529745 FAM168BA1KXE4 195 aa9.51□□□□□ -0.89
CCDC90B-215ENST00000529745 LINC01600Q96MT4 127 aa9.51□□□□□ -0.89
CCDC90B-215ENST00000529745 COX7B2Q8TF08 81 aa9.5□□□□□ -0.89
CCDC90B-215ENST00000529745 ATP5LO75964 103 aa9.49□□□□□ -0.89
CCDC90B-215ENST00000529745 IGLV5-39A0A0G2JS06 123 aa9.48□□□□□ -0.89
CCDC90B-215ENST00000529745 H3BRM9 83 aa9.48□□□□□ -0.89
CCDC90B-215ENST00000529745 REG3GQ6UW15 175 aa9.48□□□□□ -0.89
CCDC90B-215ENST00000529745 FAM19A5Q7Z5A7 132 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-215ENST00000529745 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-215ENST00000529745 M0QXV9 152 aa9.47□□□□□ -0.89
CCDC90B-215ENST00000529745 CBLN2Q8IUK8 224 aa9.47□□□□□ -0.89
CCDC90B-215ENST00000529745 SPINK8P0C7L1 97 aa9.46□□□□□ -0.9
CCDC90B-215ENST00000529745 ZNF22P17026 224 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-215ENST00000529745 PMCHL1Q16048 86 aa9.46□□□□□ -0.9
CCDC90B-215ENST00000529745 C1orf137Q5JT78 98 aa9.46□□□□□ -0.9
CCDC90B-215ENST00000529745 KRTAP11-1Q8IUC1 163 aa9.46□□□□□ -0.9
CCDC90B-215ENST00000529745 TNXBP22105 4242 aa9.45□□□□□ -0.9
CCDC90B-215ENST00000529745 IGLV7-43P04211 117 aa9.45□□□□□ -0.9
CCDC90B-215ENST00000529745 TP73-AS1Q9UF72 201 aa9.45□□□□□ -0.9
CCDC90B-215ENST00000529745 KRTAP10-8P60410 259 aa9.44□□□□□ -0.9
CCDC90B-215ENST00000529745 TRAV12-1A0A0B4J245 112 aa9.43□□□□□ -0.9
CCDC90B-215ENST00000529745 NDUFA6P56556 154 aa9.43□□□□□ -0.9
CCDC90B-215ENST00000529745 BAGE3Q86Y29 109 aa9.43□□□□□ -0.9
CCDC90B-215ENST00000529745 XAGE1AQ9HD64 81 aa9.43□□□□□ -0.9
CCDC90B-215ENST00000529745 C11orf86A6NJI1 115 aa9.42□□□□□ -0.9
CCDC90B-215ENST00000529745 SLC7A5P1Q8MH63 180 aa9.42□□□□□ -0.9
CCDC90B-215ENST00000529745 C22orf24Q9Y442 160 aa9.42□□□□□ -0.9
CCDC90B-215ENST00000529745 UBE2BP63146 152 aa9.41□□□□□ -0.9
CCDC90B-215ENST00000529745 SFTA2Q6UW10 78 aa9.41□□□□□ -0.9
CCDC90B-215ENST00000529745 IFI27L1Q96BM0 104 aa9.41□□□□□ -0.9
CCDC90B-215ENST00000529745 KRTAP9-2Q9BYQ4 174 aa9.41□□□□□ -0.9
CCDC90B-215ENST00000529745 IGLV5-37A0A075B6J1 123 aa9.4□□□□□ -0.9
CCDC90B-215ENST00000529745 TRGC2P03986 189 aa9.4□□□□□ -0.9
CCDC90B-215ENST00000529745 LBHQ53QV2 105 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-215ENST00000529745 DIRC1Q969H9 104 aa9.4□□□□□ -0.9
CCDC90B-215ENST00000529745 CHTOPQ9Y3Y2 248 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-215ENST00000529745 NUPR1O60356 82 aa9.39□□□□□ -0.91
CCDC90B-215ENST00000529745 H0Y9J4 135 aa9.38□□□□□ -0.91
CCDC90B-215ENST00000529745 HSBP1O75506 76 aa9.38□□□□□ -0.91
CCDC90B-215ENST00000529745 COX17Q14061 63 aa9.38□□□□□ -0.91
CCDC90B-215ENST00000529745 MRPL55Q7Z7F7 128 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-215ENST00000529745 COLCA2A8K830 154 aa9.37□□□□□ -0.91
CCDC90B-215ENST00000529745 LINC00310P59036 64 aa9.37□□□□□ -0.91
CCDC90B-215ENST00000529745 TMEM170BQ5T4T1 132 aa9.37□□□□□ -0.91
CCDC90B-215ENST00000529745 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
CCDC90B-215ENST00000529745 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
CCDC90B-215ENST00000529745 FAM19A2Q8N3H0 131 aa9.35□□□□□ -0.91
CCDC90B-215ENST00000529745 ERG28Q9UKR5 140 aa9.35□□□□□ -0.91
CCDC90B-215ENST00000529745 KRTAP9-6A0A140TA67 174 aa9.34□□□□□ -0.91
CCDC90B-215ENST00000529745 ZNF861PO60384 105 aa9.33□□□□□ -0.92
CCDC90B-215ENST00000529745 SERF1AO75920 110 aa9.33□□□□□ -0.92
CCDC90B-215ENST00000529745 LINC00167Q96N53 147 aa9.33□□□□□ -0.92
CCDC90B-215ENST00000529745 LEPROTL1O95214 131 aa9.32□□□□□ -0.92
CCDC90B-215ENST00000529745 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
CCDC90B-215ENST00000529745 PFN2P35080 140 aa9.32□□□□□ -0.92
CCDC90B-215ENST00000529745 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms