RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 C2orf88Q9BSF0 95 aa12□□□□□ -0.49
SF3B2-207ENST00000529577 ALKBH7Q9BT30 221 aaPredicted RBP12□□□□□ -0.49
SF3B2-207ENST00000529577 CKS1BP61024 79 aa11.99□□□□□ -0.49
SF3B2-207ENST00000529577 KRTAP13-2Q52LG2 175 aa11.99□□□□□ -0.49
SF3B2-207ENST00000529577 PRSS2P07478 247 aa11.98□□□□□ -0.49
SF3B2-207ENST00000529577 KRTAP13-1Q8IUC0 172 aa11.98□□□□□ -0.49
SF3B2-207ENST00000529577 KRTAP9-2Q9BYQ4 174 aa11.98□□□□□ -0.49
SF3B2-207ENST00000529577 MRPL55Q7Z7F7 128 aaKnown RBP11.97□□□□□ -0.49
SF3B2-207ENST00000529577 LINC00167Q96N53 147 aa11.97□□□□□ -0.49
SF3B2-207ENST00000529577 TP73-AS1Q9UF72 201 aa11.97□□□□□ -0.49
SF3B2-207ENST00000529577 RPL37AP8A6NKH3 93 aa11.96□□□□□ -0.49
SF3B2-207ENST00000529577 SMIM1B2RUZ4 78 aa11.96□□□□□ -0.49
SF3B2-207ENST00000529577 F8VRH5 84 aa11.96□□□□□ -0.49
SF3B2-207ENST00000529577 BCE1O60756 84 aa11.96□□□□□ -0.49
SF3B2-207ENST00000529577 NPSP0C0P6 89 aa11.96□□□□□ -0.49
SF3B2-207ENST00000529577 ADCYAP1P18509 176 aa11.95□□□□□ -0.5
SF3B2-207ENST00000529577 ORMDL2Q53FV1 153 aa11.95□□□□□ -0.5
SF3B2-207ENST00000529577 LBHQ53QV2 105 aaPredicted RBP11.94□□□□□ -0.5
SF3B2-207ENST00000529577 SCO1O75880 301 aa11.93□□□□□ -0.5
SF3B2-207ENST00000529577 HERVK_113P63121 156 aa11.93□□□□□ -0.5
SF3B2-207ENST00000529577 TOMM6Q96B49 74 aa11.93□□□□□ -0.5
SF3B2-207ENST00000529577 GAGE10A6NGK3 116 aa11.92□□□□□ -0.5
SF3B2-207ENST00000529577 TIMM17AQ99595 171 aa11.92□□□□□ -0.5
SF3B2-207ENST00000529577 KIAA1644Q3SXP7 199 aa11.91□□□□□ -0.5
SF3B2-207ENST00000529577 RETNLBQ9BQ08 111 aa11.91□□□□□ -0.5
SF3B2-207ENST00000529577 IGLV5-45A0A087WSX0 123 aa11.9□□□□□ -0.5
SF3B2-207ENST00000529577 K7EMI3 77 aa11.9□□□□□ -0.5
SF3B2-207ENST00000529577 RPL28P46779 137 aaKnown RBP11.9□□□□□ -0.5
SF3B2-207ENST00000529577 TYMSOSQ8TAI1 123 aa11.9□□□□□ -0.5
SF3B2-207ENST00000529577 IGLV5-37A0A075B6J1 123 aa11.89□□□□□ -0.51
SF3B2-207ENST00000529577 CRYGAP11844 174 aa11.89□□□□□ -0.51
SF3B2-207ENST00000529577 ANAPC16Q96DE5 110 aa11.89□□□□□ -0.51
SF3B2-207ENST00000529577 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
SF3B2-207ENST00000529577 COX7B2Q8TF08 81 aa11.88□□□□□ -0.51
SF3B2-207ENST00000529577 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
SF3B2-207ENST00000529577 MT-ND4LP03901 98 aa11.87□□□□□ -0.51
SF3B2-207ENST00000529577 SEC11AP67812 179 aa11.86□□□□□ -0.51
SF3B2-207ENST00000529577 PNRC1Q12796 327 aaPredicted RBP11.86□□□□□ -0.51
SF3B2-207ENST00000529577 PDZD11Q5EBL8 140 aa11.86□□□□□ -0.51
SF3B2-207ENST00000529577 ERASQ7Z444 233 aa11.86□□□□□ -0.51
SF3B2-207ENST00000529577 Q8NDZ9 215 aa11.86□□□□□ -0.51
SF3B2-207ENST00000529577 TINCRA0A1B0GVN0 87 aa11.85□□□□□ -0.51
SF3B2-207ENST00000529577 SPINK8P0C7L1 97 aa11.85□□□□□ -0.51
SF3B2-207ENST00000529577 CXCL5P42830 114 aa11.85□□□□□ -0.51
SF3B2-207ENST00000529577 RAB5BP61020 215 aa11.85□□□□□ -0.51
SF3B2-207ENST00000529577 LINC01546A6NGU7 62 aa11.84□□□□□ -0.51
SF3B2-207ENST00000529577 SCGB3A1Q96QR1 104 aa11.84□□□□□ -0.51
SF3B2-207ENST00000529577 CST9LQ9H4G1 147 aa11.83□□□□□ -0.52
SF3B2-207ENST00000529577 IGKV2-28A0A075B6P5 120 aa11.81□□□□□ -0.52
SF3B2-207ENST00000529577 IGKV2D-28P01615 120 aa11.81□□□□□ -0.52
SF3B2-207ENST00000529577 PAPPA-AS1Q5QFB9 102 aa11.81□□□□□ -0.52
SF3B2-207ENST00000529577 TMEM238C9JI98 176 aa11.79□□□□□ -0.52
SF3B2-207ENST00000529577 VPREB1P12018 145 aa11.79□□□□□ -0.52
SF3B2-207ENST00000529577 PRLHP81277 87 aa11.79□□□□□ -0.52
SF3B2-207ENST00000529577 FAM229BQ4G0N7 80 aa11.78□□□□□ -0.52
SF3B2-207ENST00000529577 A0A0U1RQV1 116 aa11.77□□□□□ -0.53
SF3B2-207ENST00000529577 UBE2AP49459 152 aa11.77□□□□□ -0.53
SF3B2-207ENST00000529577 LINC00304Q8N9R0 145 aa11.77□□□□□ -0.53
SF3B2-207ENST00000529577 A0A096LNJ9 63 aa11.75□□□□□ -0.53
SF3B2-207ENST00000529577 IGLV5-39A0A0G2JS06 123 aa11.75□□□□□ -0.53
SF3B2-207ENST00000529577 C3orf22Q8N5N4 141 aa11.75□□□□□ -0.53
SF3B2-207ENST00000529577 M0R378 163 aa11.74□□□□□ -0.53
SF3B2-207ENST00000529577 G0S2P27469 103 aa11.74□□□□□ -0.53
SF3B2-207ENST00000529577 PFN2P35080 140 aa11.74□□□□□ -0.53
SF3B2-207ENST00000529577 PMVKQ15126 192 aa11.74□□□□□ -0.53
SF3B2-207ENST00000529577 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
SF3B2-207ENST00000529577 NKAPP1Q8N9T2 125 aa11.74□□□□□ -0.53
SF3B2-207ENST00000529577 URB1-AS1Q96HZ7 61 aa11.74□□□□□ -0.53
SF3B2-207ENST00000529577 TMEM126AQ9H061 195 aa11.74□□□□□ -0.53
SF3B2-207ENST00000529577 SND1-IT1Q9HBX3 110 aa11.73□□□□□ -0.53
SF3B2-207ENST00000529577 IGLC3P0DOY3 106 aa11.72□□□□□ -0.53
SF3B2-207ENST00000529577 PLEKHB2Q96CS7 222 aa11.72□□□□□ -0.53
SF3B2-207ENST00000529577 IGLV7-46A0A075B6I9 117 aa11.71□□□□□ -0.53
SF3B2-207ENST00000529577 ZNF22P17026 224 aaPredicted RBP11.71□□□□□ -0.53
SF3B2-207ENST00000529577 FAM19A1Q7Z5A9 133 aa11.7□□□□□ -0.54
SF3B2-207ENST00000529577 GNB1LQ9BYB4 327 aa11.69□□□□□ -0.54
SF3B2-207ENST00000529577 TRAV9-1A0A075B6T8 112 aa11.68□□□□□ -0.54
SF3B2-207ENST00000529577 ATP5LO75964 103 aa11.68□□□□□ -0.54
SF3B2-207ENST00000529577 ZNF625Q96I27 306 aaPredicted RBP11.68□□□□□ -0.54
SF3B2-207ENST00000529577 MRPL18Q9H0U6 180 aaKnown RBP11.68□□□□□ -0.54
SF3B2-207ENST00000529577 ERG28Q9UKR5 140 aa11.68□□□□□ -0.54
SF3B2-207ENST00000529577 IGKV2D-26A0A0A0MRZ7 120 aa11.67□□□□□ -0.54
SF3B2-207ENST00000529577 KRTAP9-6A0A140TA67 174 aa11.67□□□□□ -0.54
SF3B2-207ENST00000529577 CLLU1Q5K131 121 aa11.67□□□□□ -0.54
SF3B2-207ENST00000529577 CDIP1Q9H305 208 aa11.67□□□□□ -0.54
SF3B2-207ENST00000529577 TMEM218A2RU14 115 aa11.66□□□□□ -0.54
SF3B2-207ENST00000529577 KRTAP4-1Q9BYQ7 146 aa11.65□□□□□ -0.54
SF3B2-207ENST00000529577 RAB14P61106 215 aa11.64□□□□□ -0.55
SF3B2-207ENST00000529577 LINC01549A6NIU2 74 aa11.63□□□□□ -0.55
SF3B2-207ENST00000529577 C11orf86A6NJI1 115 aa11.63□□□□□ -0.55
SF3B2-207ENST00000529577 H3BRM9 83 aa11.63□□□□□ -0.55
SF3B2-207ENST00000529577 FA2HQ7L5A8 372 aa11.63□□□□□ -0.55
SF3B2-207ENST00000529577 PPDPFQ9H3Y8 114 aa11.63□□□□□ -0.55
SF3B2-207ENST00000529577 IFITM2Q01629 132 aa11.62□□□□□ -0.55
SF3B2-207ENST00000529577 PMCHL1Q16048 86 aa11.62□□□□□ -0.55
SF3B2-207ENST00000529577 CBLN2Q8IUK8 224 aa11.61□□□□□ -0.55
SF3B2-207ENST00000529577 SPRR4Q96PI1 79 aa11.61□□□□□ -0.55
SF3B2-207ENST00000529577 FABP9Q0Z7S8 132 aa11.6□□□□□ -0.55
SF3B2-207ENST00000529577 HIGD2AQ9BW72 106 aa11.6□□□□□ -0.55
SF3B2-207ENST00000529577 NDUFA6P56556 154 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms