RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
CTNND1-220ENST00000529526 A8MTW9 85 aa5.77□□□□□ -1.49
CTNND1-220ENST00000529526 IGHV6-1A0A0B4J1U7 121 aa5.77□□□□□ -1.49
CTNND1-220ENST00000529526 MUC7Q8TAX7 377 aa5.77□□□□□ -1.49
CTNND1-220ENST00000529526 COL5A1P20908 1838 aaPredicted RBP5.77□□□□□ -1.49
CTNND1-220ENST00000529526 PRRC2AP48634 2157 aaKnown RBP5.77□□□□□ -1.49
CTNND1-220ENST00000529526 DEFB116Q30KQ4 102 aa5.77□□□□□ -1.49
CTNND1-220ENST00000529526 LINC01556Q5JQF7 62 aa5.76□□□□□ -1.49
CTNND1-220ENST00000529526 LYPD5Q6UWN5 251 aa5.76□□□□□ -1.49
CTNND1-220ENST00000529526 PTPN13Q12923 2485 aa5.76□□□□□ -1.49
CTNND1-220ENST00000529526 Q6Q795 121 aa5.76□□□□□ -1.49
CTNND1-220ENST00000529526 BEAN1Q3B7T3 259 aa5.75□□□□□ -1.49
CTNND1-220ENST00000529526 SERTAD4-AS1Q5TG53 156 aa5.75□□□□□ -1.49
CTNND1-220ENST00000529526 VPREB1P12018 145 aa5.75□□□□□ -1.49
CTNND1-220ENST00000529526 COX8CQ7Z4L0 72 aa5.75□□□□□ -1.49
CTNND1-220ENST00000529526 SORL1Q92673 2214 aa5.75□□□□□ -1.49
CTNND1-220ENST00000529526 Q9BRP9 147 aa5.75□□□□□ -1.49
CTNND1-220ENST00000529526 LINC00208Q96KT6 92 aa5.75□□□□□ -1.49
CTNND1-220ENST00000529526 ACACBO00763 2458 aa5.75□□□□□ -1.49
CTNND1-220ENST00000529526 CSDC2Q9Y534 153 aaKnown RBP5.74□□□□□ -1.49
CTNND1-220ENST00000529526 HIVEP3Q5T1R4 2406 aa5.74□□□□□ -1.49
CTNND1-220ENST00000529526 Q6ZVQ6 151 aa5.74□□□□□ -1.49
CTNND1-220ENST00000529526 LINC00575Q6W349 94 aa5.74□□□□□ -1.49
CTNND1-220ENST00000529526 LINC01547P58512 204 aaPredicted RBP5.73□□□□□ -1.49
CTNND1-220ENST00000529526 SOSTDC1Q6X4U4 206 aa5.73□□□□□ -1.49
CTNND1-220ENST00000529526 TRAV7A0A075B6U4 112 aa5.73□□□□□ -1.49
CTNND1-220ENST00000529526 Q6ZRU5 148 aa5.73□□□□□ -1.49
CTNND1-220ENST00000529526 PCOTHQ58A44 107 aa5.72□□□□□ -1.49
CTNND1-220ENST00000529526 NOTCH2Q04721 2471 aa5.72□□□□□ -1.49
CTNND1-220ENST00000529526 A0A1B0GUV1 79 aa5.71□□□□□ -1.49
CTNND1-220ENST00000529526 PRLHP81277 87 aa5.71□□□□□ -1.49
CTNND1-220ENST00000529526 A0A087WSZ3 146 aa5.71□□□□□ -1.49
CTNND1-220ENST00000529526 Q8N3U1 123 aa5.71□□□□□ -1.5
CTNND1-220ENST00000529526 NAV3Q8IVL0 2385 aa5.71□□□□□ -1.5
CTNND1-220ENST00000529526 PRYO14603 147 aa5.7□□□□□ -1.5
CTNND1-220ENST00000529526 LINC00337Q8N6G1 96 aa5.7□□□□□ -1.5
CTNND1-220ENST00000529526 X6R8D5 127 aa5.7□□□□□ -1.5
CTNND1-220ENST00000529526 C1orf134Q5TEV5 83 aa5.7□□□□□ -1.5
CTNND1-220ENST00000529526 C11orf72Q8NBR9 251 aa5.7□□□□□ -1.5
CTNND1-220ENST00000529526 KIF25-AS1Q9Y6Z4 181 aa5.69□□□□□ -1.5
CTNND1-220ENST00000529526 SBSPONQ8IVN8 264 aa5.69□□□□□ -1.5
CTNND1-220ENST00000529526 C2orf48Q96LS8 159 aa5.69□□□□□ -1.5
CTNND1-220ENST00000529526 TRBV7-6A0A0J9YX20 115 aa5.69□□□□□ -1.5
CTNND1-220ENST00000529526 PSPHP1O15172 72 aa5.69□□□□□ -1.5
CTNND1-220ENST00000529526 SONP18583 2426 aaKnown RBP5.69□□□□□ -1.5
CTNND1-220ENST00000529526 SPINK1P00995 79 aa5.69□□□□□ -1.5
CTNND1-220ENST00000529526 LINC00846Q9NV44 126 aa5.68□□□□□ -1.5
CTNND1-220ENST00000529526 FHL3Q13643 280 aa5.68□□□□□ -1.5
CTNND1-220ENST00000529526 H0Y9P7 68 aa5.68□□□□□ -1.5
CTNND1-220ENST00000529526 C22orf24Q9Y442 160 aa5.68□□□□□ -1.5
CTNND1-220ENST00000529526 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
CTNND1-220ENST00000529526 GOLGB1Q14789 3259 aaKnown RBP5.67□□□□□ -1.5
CTNND1-220ENST00000529526 AGRNO00468 2067 aa5.67□□□□□ -1.5
CTNND1-220ENST00000529526 PIEZO2Q9H5I5 2752 aa5.67□□□□□ -1.5
CTNND1-220ENST00000529526 TRBV7-7A0A0K0K1E9 115 aa5.66□□□□□ -1.5
CTNND1-220ENST00000529526 F8WDY8 70 aa5.66□□□□□ -1.5
CTNND1-220ENST00000529526 SMCR5Q8TEV8 140 aa5.66□□□□□ -1.5
CTNND1-220ENST00000529526 HCG22E2RYF7 251 aa5.65□□□□□ -1.5
CTNND1-220ENST00000529526 LINC01561Q8N1V8 128 aa5.65□□□□□ -1.5
CTNND1-220ENST00000529526 NAV2Q8IVL1 2488 aa5.65□□□□□ -1.5
CTNND1-220ENST00000529526 Q8N2B8 174 aa5.65□□□□□ -1.5
CTNND1-220ENST00000529526 LINC01546A6NGU7 62 aa5.65□□□□□ -1.51
CTNND1-220ENST00000529526 KIAA0087Q14695 138 aa5.65□□□□□ -1.51
CTNND1-220ENST00000529526 FAM19A4Q96LR4 140 aa5.65□□□□□ -1.51
CTNND1-220ENST00000529526 LINC00315P59091 139 aa5.64□□□□□ -1.51
CTNND1-220ENST00000529526 PLA2G1BP04054 148 aaKnown RBP5.64□□□□□ -1.51
CTNND1-220ENST00000529526 Q9UF83 564 aa5.64□□□□□ -1.51
CTNND1-220ENST00000529526 IGLV5-39A0A0G2JS06 123 aa5.64□□□□□ -1.51
CTNND1-220ENST00000529526 TET2Q6N021 2002 aaPredicted RBP5.63□□□□□ -1.51
CTNND1-220ENST00000529526 MDFIQ99750 246 aa5.63□□□□□ -1.51
CTNND1-220ENST00000529526 CRYGAP11844 174 aa5.63□□□□□ -1.51
CTNND1-220ENST00000529526 IGF2RP11717 2491 aa5.63□□□□□ -1.51
CTNND1-220ENST00000529526 C6orf48Q9UBA6 75 aa5.62□□□□□ -1.51
CTNND1-220ENST00000529526 SMIM29Q86T20 159 aa5.62□□□□□ -1.51
CTNND1-220ENST00000529526 IGHV3OR16-9A0A0B4J2B5 98 aa5.62□□□□□ -1.51
CTNND1-220ENST00000529526 TMEM254Q8TBM7 123 aa5.62□□□□□ -1.51
CTNND1-220ENST00000529526 CDIP1Q9H305 208 aa5.62□□□□□ -1.51
CTNND1-220ENST00000529526 COL4A2P08572 1712 aa5.62□□□□□ -1.51
CTNND1-220ENST00000529526 PTPRBP23467 1997 aa5.61□□□□□ -1.51
CTNND1-220ENST00000529526 SPATA3Q8NHX4 192 aa5.61□□□□□ -1.51
CTNND1-220ENST00000529526 FAM218AQ96MZ4 157 aa5.61□□□□□ -1.51
CTNND1-220ENST00000529526 CCDC168Q8NDH2 2452 aa5.61□□□□□ -1.51
CTNND1-220ENST00000529526 LINC00167Q96N53 147 aa5.61□□□□□ -1.51
CTNND1-220ENST00000529526 COL27A1Q8IZC6 1860 aaPredicted RBP5.6□□□□□ -1.51
CTNND1-220ENST00000529526 ABCA2Q9BZC7 2435 aa5.6□□□□□ -1.51
CTNND1-220ENST00000529526 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
CTNND1-220ENST00000529526 NCOR2Q9Y618 2525 aa5.6□□□□□ -1.51
CTNND1-220ENST00000529526 C1orf64Q8NEQ6 169 aa5.6□□□□□ -1.51
CTNND1-220ENST00000529526 CACNA1AO00555 2505 aa5.59□□□□□ -1.51
CTNND1-220ENST00000529526 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
CTNND1-220ENST00000529526 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
CTNND1-220ENST00000529526 CXCL6P80162 114 aa5.59□□□□□ -1.51
CTNND1-220ENST00000529526 MOBPQ13875 183 aa5.59□□□□□ -1.51
CTNND1-220ENST00000529526 SMCPP49901 116 aaPredicted RBP5.59□□□□□ -1.51
CTNND1-220ENST00000529526 NHLRC4P0CG21 123 aaPredicted RBP5.58□□□□□ -1.52
CTNND1-220ENST00000529526 LIMD2Q9BT23 127 aa5.58□□□□□ -1.52
CTNND1-220ENST00000529526 FSHBP01225 129 aa5.58□□□□□ -1.52
CTNND1-220ENST00000529526 PHF5AQ7RTV0 110 aaKnown RBP5.58□□□□□ -1.52
CTNND1-220ENST00000529526 SPACA4Q8TDM5 124 aa5.58□□□□□ -1.52
CTNND1-220ENST00000529526 C2CD3Q4AC94 2353 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms