RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 RGPD3A6NKT7 1758 aaPredicted RBP0.31□□□□□ -2.36
BRCA2-203ENST00000528762 RGPD4Q7Z3J3 1758 aa0.31□□□□□ -2.36
BRCA2-203ENST00000528762 ATRQ13535 2644 aa0.31□□□□□ -2.36
BRCA2-203ENST00000528762 TROQ12816 1431 aaPredicted RBP0.3□□□□□ -2.36
BRCA2-203ENST00000528762 FAT2Q9NYQ8 4349 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 A0A0G2JMZ2 1700 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 PAPPA2Q9BXP8 1791 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 TRBV6-1A0A0K0K1D8 114 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 ATOX1O00244 68 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 PIGYQ3MUY2 71 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 FDCSPQ8NFU4 85 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 PRO1933Q9H354 126 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 AP4S1Q9Y587 144 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 CLTCQ00610 1675 aaKnown RBP0.3□□□□□ -2.36
BRCA2-203ENST00000528762 MON2Q7Z3U7 1717 aa0.3□□□□□ -2.36
BRCA2-203ENST00000528762 PKD1L1Q8TDX9 2849 aa0.29□□□□□ -2.36
BRCA2-203ENST00000528762 FXYD6-FXYD2A0A087WZ82 144 aa0.29□□□□□ -2.36
BRCA2-203ENST00000528762 A0A1B0GWA3 101 aa0.29□□□□□ -2.36
BRCA2-203ENST00000528762 CFDP00746 253 aaPredicted RBP0.29□□□□□ -2.36
BRCA2-203ENST00000528762 WFDC2Q14508 124 aa0.29□□□□□ -2.36
BRCA2-203ENST00000528762 LINC01600Q96MT4 127 aa0.29□□□□□ -2.36
BRCA2-203ENST00000528762 WNK2Q9Y3S1 2297 aa0.29□□□□□ -2.36
BRCA2-203ENST00000528762 POLA1P09884 1462 aaPredicted RBP0.29□□□□□ -2.36
BRCA2-203ENST00000528762 HIVEP3Q5T1R4 2406 aa0.28□□□□□ -2.36
BRCA2-203ENST00000528762 SHPRHQ149N8 1683 aa0.28□□□□□ -2.36
BRCA2-203ENST00000528762 C7orf77A4D0Y5 90 aa0.28□□□□□ -2.36
BRCA2-203ENST00000528762 DEFB123Q8N688 67 aa0.28□□□□□ -2.36
BRCA2-203ENST00000528762 U3KQA8 63 aa0.28□□□□□ -2.36
BRCA2-203ENST00000528762 KMT2AQ03164 3969 aa0.28□□□□□ -2.36
BRCA2-203ENST00000528762 PLEKHH2Q8IVE3 1493 aa0.28□□□□□ -2.37
BRCA2-203ENST00000528762 NLRP1Q9C000 1473 aa0.28□□□□□ -2.37
BRCA2-203ENST00000528762 TENM4Q6N022 2769 aa0.28□□□□□ -2.37
BRCA2-203ENST00000528762 UBR1Q8IWV7 1749 aa0.27□□□□□ -2.37
BRCA2-203ENST00000528762 ABCA2Q9BZC7 2435 aa0.27□□□□□ -2.37
BRCA2-203ENST00000528762 KIF20BQ96Q89 1820 aa0.27□□□□□ -2.37
BRCA2-203ENST00000528762 PRKDCP78527 4128 aaKnown RBP0.27□□□□□ -2.37
BRCA2-203ENST00000528762 A0A087WVE0 104 aa0.27□□□□□ -2.37
BRCA2-203ENST00000528762 LINC00959A0A1B0GUT2 108 aa0.27□□□□□ -2.37
BRCA2-203ENST00000528762 SYS1-DBNDD2H3BUS1 97 aa0.27□□□□□ -2.37
BRCA2-203ENST00000528762 VAMP8Q9BV40 100 aa0.27□□□□□ -2.37
BRCA2-203ENST00000528762 TARBP1Q13395 1621 aaKnown RBP0.27□□□□□ -2.37
BRCA2-203ENST00000528762 BSNQ9UPA5 3926 aa0.27□□□□□ -2.37
BRCA2-203ENST00000528762 FMN2Q9NZ56 1722 aa0.27□□□□□ -2.37
BRCA2-203ENST00000528762 SYNE2Q8WXH0 6885 aaKnown RBP0.26□□□□□ -2.37
BRCA2-203ENST00000528762 SPTA1P02549 2419 aa0.26□□□□□ -2.37
BRCA2-203ENST00000528762 PMCHL1Q16048 86 aa0.26□□□□□ -2.37
BRCA2-203ENST00000528762 Q5VSD8 79 aa0.26□□□□□ -2.37
BRCA2-203ENST00000528762 TTC37Q6PGP7 1564 aa0.26□□□□□ -2.37
BRCA2-203ENST00000528762 KIAA0556O60303 1618 aa0.26□□□□□ -2.37
BRCA2-203ENST00000528762 COL14A1Q05707 1796 aaKnown RBP0.26□□□□□ -2.37
BRCA2-203ENST00000528762 DMBT1Q9UGM3 2413 aaPredicted RBP0.26□□□□□ -2.37
BRCA2-203ENST00000528762 MYCBP2O75592 4640 aa0.25□□□□□ -2.37
BRCA2-203ENST00000528762 C5P01031 1676 aa0.25□□□□□ -2.37
BRCA2-203ENST00000528762 TRBV7-4A0A0J9YYF1 115 aa0.25□□□□□ -2.37
BRCA2-203ENST00000528762 FAUP35544 74 aaKnown RBP0.25□□□□□ -2.37
BRCA2-203ENST00000528762 CSPG4Q6UVK1 2322 aa0.25□□□□□ -2.37
BRCA2-203ENST00000528762 KIAA1551Q9HCM1 1747 aa0.24□□□□□ -2.37
BRCA2-203ENST00000528762 RAPGEF2Q9Y4G8 1499 aa0.24□□□□□ -2.37
BRCA2-203ENST00000528762 DEFB109BQ30KR1 87 aa0.24□□□□□ -2.37
BRCA2-203ENST00000528762 PSMG4Q5JS54 123 aa0.24□□□□□ -2.37
BRCA2-203ENST00000528762 DEFB107AQ8IZN7 70 aa0.24□□□□□ -2.37
BRCA2-203ENST00000528762 CRYBG1Q9Y4K1 1723 aa0.24□□□□□ -2.37
BRCA2-203ENST00000528762 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
BRCA2-203ENST00000528762 SETBP1Q9Y6X0 1596 aa0.23□□□□□ -2.37
BRCA2-203ENST00000528762 UQCRHP07919 91 aa0.23□□□□□ -2.37
BRCA2-203ENST00000528762 C20orf78Q9BR46 151 aa0.23□□□□□ -2.37
BRCA2-203ENST00000528762 CRIPTQ9P021 101 aa0.23□□□□□ -2.37
BRCA2-203ENST00000528762 HIGD1BQ9P298 99 aa0.23□□□□□ -2.37
BRCA2-203ENST00000528762 EPRSP07814 1512 aaKnown RBP0.23□□□□□ -2.37
BRCA2-203ENST00000528762 ABCC2Q92887 1545 aa0.23□□□□□ -2.37
BRCA2-203ENST00000528762 PKD1L3Q7Z443 1732 aa0.22□□□□□ -2.37
BRCA2-203ENST00000528762 ARMS2P0C7Q2 107 aa0.22□□□□□ -2.37
BRCA2-203ENST00000528762 PSENENQ9NZ42 101 aa0.22□□□□□ -2.37
BRCA2-203ENST00000528762 BAZ1AQ9NRL2 1556 aaPredicted RBP0.22□□□□□ -2.37
BRCA2-203ENST00000528762 CACNA1AO00555 2505 aa0.22□□□□□ -2.37
BRCA2-203ENST00000528762 PTPN13Q12923 2485 aa0.22□□□□□ -2.37
BRCA2-203ENST00000528762 FANCAO15360 1455 aa0.22□□□□□ -2.37
BRCA2-203ENST00000528762 RGPD2P0DJD1 1756 aa0.22□□□□□ -2.37
BRCA2-203ENST00000528762 SMARCA2P51531 1590 aa0.21□□□□□ -2.38
BRCA2-203ENST00000528762 COX6B1P14854 86 aa0.21□□□□□ -2.38
BRCA2-203ENST00000528762 FXYD6Q9H0Q3 95 aa0.21□□□□□ -2.38
BRCA2-203ENST00000528762 SLIT1O75093 1534 aa0.21□□□□□ -2.38
BRCA2-203ENST00000528762 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
BRCA2-203ENST00000528762 CHD8Q9HCK8 2581 aa0.2□□□□□ -2.38
BRCA2-203ENST00000528762 UQCRHLA0A096LP55 91 aa0.2□□□□□ -2.38
BRCA2-203ENST00000528762 F8WEM9 126 aa0.2□□□□□ -2.38
BRCA2-203ENST00000528762 H3BQF6 201 aa0.2□□□□□ -2.38
BRCA2-203ENST00000528762 K7EQZ3 153 aa0.2□□□□□ -2.38
BRCA2-203ENST00000528762 SPRR1AP35321 89 aa0.2□□□□□ -2.38
BRCA2-203ENST00000528762 TNXBP22105 4242 aa0.2□□□□□ -2.38
BRCA2-203ENST00000528762 EDC4Q6P2E9 1401 aaKnown RBP0.2□□□□□ -2.38
BRCA2-203ENST00000528762 MYO3AQ8NEV4 1616 aa0.2□□□□□ -2.38
BRCA2-203ENST00000528762 LRRC37AA6NMS7 1700 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 REV3LO60673 3130 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 UBR3Q6ZT12 1888 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 ATP10BO94823 1461 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 IQSEC2Q5JU85 1478 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 A0A1B0GU69 56 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 H0Y9P7 68 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 GYPAP02724 150 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms