RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 TM2D3Q9BRN9 247 aa8.74□□□□□ -1.01
TSKU-203ENST00000527881 USP9YO00507 2555 aaPredicted RBP8.74□□□□□ -1.01
TSKU-203ENST00000527881 MIFP14174 115 aa8.73□□□□□ -1.01
TSKU-203ENST00000527881 SEC61GP60059 68 aa8.73□□□□□ -1.01
TSKU-203ENST00000527881 DEFB112Q30KQ8 113 aa8.73□□□□□ -1.01
TSKU-203ENST00000527881 OXLD1Q5BKU9 147 aa8.73□□□□□ -1.01
TSKU-203ENST00000527881 CUBNO60494 3623 aa8.73□□□□□ -1.01
TSKU-203ENST00000527881 M0R2N4 97 aa8.73□□□□□ -1.01
TSKU-203ENST00000527881 ZNF292O60281 2723 aa8.72□□□□□ -1.01
TSKU-203ENST00000527881 A0A087WZ39 114 aa8.72□□□□□ -1.01
TSKU-203ENST00000527881 C16orf95Q9H693 158 aa8.72□□□□□ -1.01
TSKU-203ENST00000527881 AVPP01185 164 aa8.72□□□□□ -1.01
TSKU-203ENST00000527881 MSMBP08118 114 aa8.72□□□□□ -1.01
TSKU-203ENST00000527881 CRYBG3Q68DQ2 2970 aa8.71□□□□□ -1.01
TSKU-203ENST00000527881 LY6G6DO95868 133 aa8.71□□□□□ -1.02
TSKU-203ENST00000527881 Q6ZQT0 140 aa8.71□□□□□ -1.02
TSKU-203ENST00000527881 ZNF843Q8N446 348 aa8.71□□□□□ -1.02
TSKU-203ENST00000527881 LINC00482Q8N8I6 264 aa8.71□□□□□ -1.02
TSKU-203ENST00000527881 SETD2Q9BYW2 2564 aaPredicted RBP8.71□□□□□ -1.02
TSKU-203ENST00000527881 NDUFC1O43677 76 aa8.7□□□□□ -1.02
TSKU-203ENST00000527881 A0A096LNT2 108 aa8.7□□□□□ -1.02
TSKU-203ENST00000527881 EPM2AB3EWF7 344 aa8.7□□□□□ -1.02
TSKU-203ENST00000527881 DAD1P61803 113 aa8.7□□□□□ -1.02
TSKU-203ENST00000527881 BSNQ9UPA5 3926 aa8.7□□□□□ -1.02
TSKU-203ENST00000527881 ZNF561-AS1K7EIQ3 104 aa8.69□□□□□ -1.02
TSKU-203ENST00000527881 C1orf158Q8N1D5 194 aa8.69□□□□□ -1.02
TSKU-203ENST00000527881 FN1P02751 2386 aaKnown RBP8.69□□□□□ -1.02
TSKU-203ENST00000527881 PTPN13Q12923 2485 aa8.69□□□□□ -1.02
TSKU-203ENST00000527881 NREPQ16612 68 aa8.69□□□□□ -1.02
TSKU-203ENST00000527881 USP9XQ93008 2570 aaPredicted RBP8.68□□□□□ -1.02
TSKU-203ENST00000527881 IGHV4-30-2A0A087WSY4 118 aa8.68□□□□□ -1.02
TSKU-203ENST00000527881 LINC00959A0A1B0GUT2 108 aa8.68□□□□□ -1.02
TSKU-203ENST00000527881 BCE1O60756 84 aa8.68□□□□□ -1.02
TSKU-203ENST00000527881 C9orf116Q5BN46 136 aaPredicted RBP8.68□□□□□ -1.02
TSKU-203ENST00000527881 Q6ZQY7 126 aa8.68□□□□□ -1.02
TSKU-203ENST00000527881 NANOS2P60321 138 aaKnown RBP8.68□□□□□ -1.02
TSKU-203ENST00000527881 LINC00167Q96N53 147 aa8.68□□□□□ -1.02
TSKU-203ENST00000527881 TRBV6-8A0A0A6YYG3 113 aa8.67□□□□□ -1.02
TSKU-203ENST00000527881 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
TSKU-203ENST00000527881 SONP18583 2426 aaKnown RBP8.67□□□□□ -1.02
TSKU-203ENST00000527881 CCL19Q99731 98 aa8.67□□□□□ -1.02
TSKU-203ENST00000527881 ATP5EP56381 51 aaPredicted RBP8.66□□□□□ -1.02
TSKU-203ENST00000527881 IGLV10-54A0A075B6I4 117 aa8.66□□□□□ -1.02
TSKU-203ENST00000527881 GNLYP22749 145 aa8.66□□□□□ -1.02
TSKU-203ENST00000527881 LINC00575Q6W349 94 aa8.66□□□□□ -1.02
TSKU-203ENST00000527881 A0A096LPF7 62 aa8.65□□□□□ -1.02
TSKU-203ENST00000527881 BPY2O14599 106 aa8.65□□□□□ -1.02
TSKU-203ENST00000527881 C11orf44Q8N8P7 122 aa8.65□□□□□ -1.02
TSKU-203ENST00000527881 LINC00269Q8N2A0 174 aa8.65□□□□□ -1.02
TSKU-203ENST00000527881 Q8N9L7 120 aa8.65□□□□□ -1.02
TSKU-203ENST00000527881 FUSP35637 526 aaKnown RBP eCLIP8.65□□□□□ -1.03
TSKU-203ENST00000527881 FAM229BQ4G0N7 80 aa8.65□□□□□ -1.03
TSKU-203ENST00000527881 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
TSKU-203ENST00000527881 PLA2G2AP14555 144 aa8.64□□□□□ -1.03
TSKU-203ENST00000527881 MAPK1IP1LQ8NDC0 245 aa8.64□□□□□ -1.03
TSKU-203ENST00000527881 A0A1W2PRX2 142 aa8.63□□□□□ -1.03
TSKU-203ENST00000527881 B4DSR2 109 aa8.63□□□□□ -1.03
TSKU-203ENST00000527881 DEFB130BP0DP73 79 aa8.63□□□□□ -1.03
TSKU-203ENST00000527881 DEFB130AP0DP74 79 aa8.63□□□□□ -1.03
TSKU-203ENST00000527881 CXCL6P80162 114 aa8.63□□□□□ -1.03
TSKU-203ENST00000527881 DEFB114Q30KQ6 69 aa8.63□□□□□ -1.03
TSKU-203ENST00000527881 ODF3L2Q3SX64 289 aa8.63□□□□□ -1.03
TSKU-203ENST00000527881 LOC110117498A0A087WWA1 95 aa8.62□□□□□ -1.03
TSKU-203ENST00000527881 Q8IZM0 81 aa8.62□□□□□ -1.03
TSKU-203ENST00000527881 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
TSKU-203ENST00000527881 TRBV7-4A0A0J9YYF1 115 aa8.61□□□□□ -1.03
TSKU-203ENST00000527881 MUC6Q6W4X9 2439 aa8.61□□□□□ -1.03
TSKU-203ENST00000527881 PDE6GP18545 87 aa8.61□□□□□ -1.03
TSKU-203ENST00000527881 C6orf223Q8N319 242 aa8.61□□□□□ -1.03
TSKU-203ENST00000527881 PRYO14603 147 aa8.61□□□□□ -1.03
TSKU-203ENST00000527881 ESRGQ1W209 222 aa8.61□□□□□ -1.03
TSKU-203ENST00000527881 SPATA3Q8NHX4 192 aa8.61□□□□□ -1.03
TSKU-203ENST00000527881 NCOR2Q9Y618 2525 aa8.6□□□□□ -1.03
TSKU-203ENST00000527881 ZNF702PQ9H963 129 aa8.58□□□□□ -1.04
TSKU-203ENST00000527881 POLQO75417 2590 aa8.58□□□□□ -1.04
TSKU-203ENST00000527881 CHD6Q8TD26 2715 aa8.58□□□□□ -1.04
TSKU-203ENST00000527881 C16orf74Q96GX8 76 aa8.58□□□□□ -1.04
TSKU-203ENST00000527881 GYPEP15421 78 aa8.57□□□□□ -1.04
TSKU-203ENST00000527881 CSMD2Q7Z408 3487 aa8.57□□□□□ -1.04
TSKU-203ENST00000527881 ZFYVE26Q68DK2 2539 aa8.57□□□□□ -1.04
TSKU-203ENST00000527881 PRB2P02812 416 aaPredicted RBP8.57□□□□□ -1.04
TSKU-203ENST00000527881 IL17DQ8TAD2 202 aa8.57□□□□□ -1.04
TSKU-203ENST00000527881 WFDC10AQ9H1F0 79 aa8.57□□□□□ -1.04
TSKU-203ENST00000527881 ITPR1Q14643 2758 aa8.57□□□□□ -1.04
TSKU-203ENST00000527881 HIGD2AQ9BW72 106 aa8.57□□□□□ -1.04
TSKU-203ENST00000527881 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
TSKU-203ENST00000527881 Q8NDZ9 215 aa8.56□□□□□ -1.04
TSKU-203ENST00000527881 BBC3Q96PG8 261 aaPredicted RBP8.56□□□□□ -1.04
TSKU-203ENST00000527881 DIRC1Q969H9 104 aa8.55□□□□□ -1.04
TSKU-203ENST00000527881 CELA1Q9UNI1 258 aa8.55□□□□□ -1.04
TSKU-203ENST00000527881 COX17Q14061 63 aa8.54□□□□□ -1.04
TSKU-203ENST00000527881 CHCHD10Q8WYQ3 142 aaPredicted RBP8.54□□□□□ -1.04
TSKU-203ENST00000527881 EPG5Q9HCE0 2579 aa8.53□□□□□ -1.04
TSKU-203ENST00000527881 UNQ6190/PRO20217Q6UXQ8 127 aa8.53□□□□□ -1.04
TSKU-203ENST00000527881 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.53□□□□□ -1.04
TSKU-203ENST00000527881 LINC01006Q8NI28 216 aa8.53□□□□□ -1.04
TSKU-203ENST00000527881 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
TSKU-203ENST00000527881 CHD8Q9HCK8 2581 aa8.53□□□□□ -1.04
TSKU-203ENST00000527881 ZANQ9Y493 2812 aa8.53□□□□□ -1.04
TSKU-203ENST00000527881 C3orf84H3BNL1 204 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms