RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 MT-ND6P03923 174 aa2.1□□□□□ -2.07
SOX6-209ENST00000527840 CEBPGP53567 150 aa2.1□□□□□ -2.07
SOX6-209ENST00000527840 REG3AQ06141 175 aa2.1□□□□□ -2.07
SOX6-209ENST00000527840 ADIRFQ15847 76 aa2.1□□□□□ -2.07
SOX6-209ENST00000527840 CLPSL2Q6UWE3 100 aa2.1□□□□□ -2.07
SOX6-209ENST00000527840 SCXQ7RTU7 201 aa2.1□□□□□ -2.07
SOX6-209ENST00000527840 DEFB104AQ8WTQ1 72 aa2.1□□□□□ -2.07
SOX6-209ENST00000527840 RPL39LQ96EH5 51 aaKnown RBP2.1□□□□□ -2.07
SOX6-209ENST00000527840 TMEM243Q9BU79 118 aa2.1□□□□□ -2.07
SOX6-209ENST00000527840 DMBT1Q9UGM3 2413 aaPredicted RBP2.09□□□□□ -2.07
SOX6-209ENST00000527840 IGLV10-54A0A075B6I4 117 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 TRAV8-4A0A0B4J246 113 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 TRBV6-5A0A0K0K1A5 114 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 A0A1B0GV90 55 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 C20orf202A1L168 122 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 FAM231BA6NCW3 169 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 SDHAF1A6NFY7 115 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 HIGD1CA8MV81 97 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 A8MWL6 223 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 I3L3M4 83 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 TCAPO15273 167 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 HLA-DQA1P01909 254 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 INAFM2P0DMQ5 153 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 KRTAP10-4P60372 401 aaPredicted RBP2.09□□□□□ -2.07
SOX6-209ENST00000527840 COTL1Q14019 142 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 PDZD11Q5EBL8 140 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 SMIM15Q7Z3B0 74 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 C9orf163Q8N9P6 203 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 NUP35Q8NFH5 326 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 CIRBP-AS1Q8TBR5 109 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 TSKUQ8WUA8 353 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 RNF185Q96GF1 192 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 MIEN1Q9BRT3 115 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 CHAC1Q9BUX1 264 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 SNHG12Q9BXW3 62 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 GNB1LQ9BYB4 327 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 TMEM191AQ9H0A3 160 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 OSTCQ9NRP0 149 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 V9GYV3 84 aa2.09□□□□□ -2.07
SOX6-209ENST00000527840 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.08□□□□□ -2.08
SOX6-209ENST00000527840 TRBV27A0A0K0K1C4 114 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 A0A1B0GUT8 65 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 SMIM27A0A1W2PRY6 76 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 IGKV2-29A2NJV5 120 aaPredicted RBP2.08□□□□□ -2.08
SOX6-209ENST00000527840 PANO1I0J062 215 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 UBE2L6O14933 153 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 DLEU1O43261 78 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 NCR2O95944 276 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 APCSP02743 223 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 POLR2KP53803 58 aaKnown RBP2.08□□□□□ -2.08
SOX6-209ENST00000527840 CNBPP62633 177 aaKnown RBP2.08□□□□□ -2.08
SOX6-209ENST00000527840 COL5A1-AS1Q5SY13 56 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 SDIM1Q6ZPB5 146 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 AMN1Q8IY45 258 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 C15orf56Q8N910 161 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 PRO1933Q9H354 126 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 TRAPPC1Q9Y5R8 145 aa2.08□□□□□ -2.08
SOX6-209ENST00000527840 HMCN2Q8NDA2 5059 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 IGKV3OR2-268A0A0C4DH90 116 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 A4D1N5 150 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 SMKR1H3BMG3 65 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 FGF6P10767 208 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 ZNF25P17030 456 aaPredicted RBP2.07□□□□□ -2.08
SOX6-209ENST00000527840 PMCHP20382 165 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 CIRBPQ14011 172 aaKnown RBP2.07□□□□□ -2.08
SOX6-209ENST00000527840 PMCHL1Q16048 86 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 MRPL51Q4U2R6 128 aaKnown RBP2.07□□□□□ -2.08
SOX6-209ENST00000527840 RNASEKQ6P5S7 137 aaKnown RBP2.07□□□□□ -2.08
SOX6-209ENST00000527840 ATP5L2Q7Z4Y8 100 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 OR5A1Q8NGJ0 315 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 ORAOV1Q8WV07 137 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 CHCHD10Q8WYQ3 142 aaPredicted RBP2.07□□□□□ -2.08
SOX6-209ENST00000527840 BORCS7Q96B45 105 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 MRAP2Q96G30 205 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 VAMP8Q9BV40 100 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 ST20Q9HBF5 79 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 CDC42SE2Q9NRR3 84 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 UQCR10Q9UDW1 63 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 NAT8BQ9UHF3 227 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 CBY1Q9Y3M2 126 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 UBR4Q5T4S7 5183 aa2.07□□□□□ -2.08
SOX6-209ENST00000527840 IGHV3-64A0A075B6Q5 118 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 GVQW2A0A096LPI5 108 aaPredicted RBP2.06□□□□□ -2.08
SOX6-209ENST00000527840 LINC00959A0A1B0GUT2 108 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 A0A1B0GXF2 115 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 SERF1AO75920 110 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 PPP1R17O96001 155 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 CHTF8P0CG12 524 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 FAM104BQ5XKR9 115 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 AMMECR1LQ6DCA0 310 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 TMEM136Q6ZRR5 245 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 SPACA4Q8TDM5 124 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 UBE2D4Q9Y2X8 147 aa2.06□□□□□ -2.08
SOX6-209ENST00000527840 CSDC2Q9Y534 153 aaKnown RBP2.06□□□□□ -2.08
SOX6-209ENST00000527840 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.05□□□□□ -2.08
SOX6-209ENST00000527840 A0A1B0GW15 77 aa2.05□□□□□ -2.08
SOX6-209ENST00000527840 D6R8Y8 96 aa2.05□□□□□ -2.08
SOX6-209ENST00000527840 CCL25O15444 150 aa2.05□□□□□ -2.08
SOX6-209ENST00000527840 NUPR1O60356 82 aa2.05□□□□□ -2.08
SOX6-209ENST00000527840 IGLC3P0DOY3 106 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms