RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 FABP9Q0Z7S8 132 aa11.85□□□□□ -0.51
CAPN1-211ENST00000527739 ERASQ7Z444 233 aa11.85□□□□□ -0.51
CAPN1-211ENST00000527739 CDKN2A-AS1Q9UH64 79 aa11.85□□□□□ -0.51
CAPN1-211ENST00000527739 UBE2BP63146 152 aa11.84□□□□□ -0.51
CAPN1-211ENST00000527739 FAM19A3Q7Z5A8 133 aa11.84□□□□□ -0.51
CAPN1-211ENST00000527739 COX19Q49B96 90 aa11.83□□□□□ -0.52
CAPN1-211ENST00000527739 FA2HQ7L5A8 372 aa11.83□□□□□ -0.52
CAPN1-211ENST00000527739 Q8IZM0 81 aa11.83□□□□□ -0.52
CAPN1-211ENST00000527739 LINC00469Q8N7U9 141 aa11.83□□□□□ -0.52
CAPN1-211ENST00000527739 MRPL18Q9H0U6 180 aaKnown RBP11.83□□□□□ -0.52
CAPN1-211ENST00000527739 M0QXV9 152 aa11.82□□□□□ -0.52
CAPN1-211ENST00000527739 ODF1Q14990 250 aa11.82□□□□□ -0.52
CAPN1-211ENST00000527739 SMCO4Q9NRQ5 59 aa11.82□□□□□ -0.52
CAPN1-211ENST00000527739 RHEBQ15382 184 aa11.81□□□□□ -0.52
CAPN1-211ENST00000527739 C9orf129Q5T035 196 aaKnown RBP11.81□□□□□ -0.52
CAPN1-211ENST00000527739 IGLV7-43P04211 117 aa11.8□□□□□ -0.52
CAPN1-211ENST00000527739 KRTAP11-1Q8IUC1 163 aa11.8□□□□□ -0.52
CAPN1-211ENST00000527739 LINC01549A6NIU2 74 aa11.79□□□□□ -0.52
CAPN1-211ENST00000527739 KRTAP10-8P60410 259 aa11.79□□□□□ -0.52
CAPN1-211ENST00000527739 C10orf91Q5T1B1 145 aa11.79□□□□□ -0.52
CAPN1-211ENST00000527739 KRTAP7-1Q8IUC3 87 aa11.79□□□□□ -0.52
CAPN1-211ENST00000527739 CARHSP1Q9Y2V2 147 aaKnown RBP11.78□□□□□ -0.52
CAPN1-211ENST00000527739 TINCRA0A1B0GVN0 87 aa11.77□□□□□ -0.53
CAPN1-211ENST00000527739 LINC01546A6NGU7 62 aa11.77□□□□□ -0.53
CAPN1-211ENST00000527739 F8VRH5 84 aa11.77□□□□□ -0.53
CAPN1-211ENST00000527739 DIRC1Q969H9 104 aa11.77□□□□□ -0.53
CAPN1-211ENST00000527739 CST9LQ9H4G1 147 aa11.77□□□□□ -0.53
CAPN1-211ENST00000527739 XAGE1AQ9HD64 81 aa11.77□□□□□ -0.53
CAPN1-211ENST00000527739 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
CAPN1-211ENST00000527739 NDUFA6P56556 154 aa11.75□□□□□ -0.53
CAPN1-211ENST00000527739 PMVKQ15126 192 aa11.75□□□□□ -0.53
CAPN1-211ENST00000527739 COX7B2Q8TF08 81 aa11.75□□□□□ -0.53
CAPN1-211ENST00000527739 TRAPPC1Q9Y5R8 145 aa11.75□□□□□ -0.53
CAPN1-211ENST00000527739 APOC3P02656 99 aa11.74□□□□□ -0.53
CAPN1-211ENST00000527739 SPINK8P0C7L1 97 aa11.74□□□□□ -0.53
CAPN1-211ENST00000527739 CXCL5P42830 114 aa11.74□□□□□ -0.53
CAPN1-211ENST00000527739 PDZD11Q5EBL8 140 aa11.74□□□□□ -0.53
CAPN1-211ENST00000527739 C22orf24Q9Y442 160 aa11.72□□□□□ -0.53
CAPN1-211ENST00000527739 H0Y9J4 135 aa11.71□□□□□ -0.53
CAPN1-211ENST00000527739 RAB5BP61020 215 aa11.71□□□□□ -0.53
CAPN1-211ENST00000527739 LBHQ53QV2 105 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-211ENST00000527739 IGLV5-45A0A087WSX0 123 aa11.7□□□□□ -0.54
CAPN1-211ENST00000527739 H3BRM9 83 aa11.7□□□□□ -0.54
CAPN1-211ENST00000527739 NDUFA5Q16718 116 aa11.7□□□□□ -0.54
CAPN1-211ENST00000527739 LINC00614P0C842 121 aa11.69□□□□□ -0.54
CAPN1-211ENST00000527739 PRR26Q8N8Z3 221 aa11.69□□□□□ -0.54
CAPN1-211ENST00000527739 SNAPINO95295 136 aa11.68□□□□□ -0.54
CAPN1-211ENST00000527739 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
CAPN1-211ENST00000527739 C18orf32Q8TCD1 76 aa11.68□□□□□ -0.54
CAPN1-211ENST00000527739 SVBPQ8N300 66 aa11.67□□□□□ -0.54
CAPN1-211ENST00000527739 HBDP02042 147 aa11.66□□□□□ -0.54
CAPN1-211ENST00000527739 URB1-AS1Q96HZ7 61 aa11.66□□□□□ -0.54
CAPN1-211ENST00000527739 A0A096LNJ9 63 aa11.65□□□□□ -0.54
CAPN1-211ENST00000527739 ATP5LO75964 103 aa11.65□□□□□ -0.54
CAPN1-211ENST00000527739 MRPL55Q7Z7F7 128 aaKnown RBP11.65□□□□□ -0.54
CAPN1-211ENST00000527739 IGLC3P0DOY3 106 aa11.64□□□□□ -0.55
CAPN1-211ENST00000527739 GAGE10A6NGK3 116 aa11.63□□□□□ -0.55
CAPN1-211ENST00000527739 NUPR1O60356 82 aa11.63□□□□□ -0.55
CAPN1-211ENST00000527739 RPL37AP8A6NKH3 93 aa11.62□□□□□ -0.55
CAPN1-211ENST00000527739 ZNF861PO60384 105 aa11.62□□□□□ -0.55
CAPN1-211ENST00000527739 PFN2P35080 140 aa11.62□□□□□ -0.55
CAPN1-211ENST00000527739 BAGE3Q86Y29 109 aa11.62□□□□□ -0.55
CAPN1-211ENST00000527739 TP73-AS1Q9UF72 201 aa11.62□□□□□ -0.55
CAPN1-211ENST00000527739 ZNF22P17026 224 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-211ENST00000527739 LINC00167Q96N53 147 aa11.61□□□□□ -0.55
CAPN1-211ENST00000527739 TMEM170BQ5T4T1 132 aa11.6□□□□□ -0.55
CAPN1-211ENST00000527739 NKAPP1Q8N9T2 125 aa11.6□□□□□ -0.55
CAPN1-211ENST00000527739 IGLV1-50A0A075B6I6 118 aa11.59□□□□□ -0.55
CAPN1-211ENST00000527739 LPAP08519 4548 aa11.58□□□□□ -0.56
CAPN1-211ENST00000527739 KRTAP1-4P0C5Y4 121 aa11.58□□□□□ -0.56
CAPN1-211ENST00000527739 IGLV5-39A0A0G2JS06 123 aa11.57□□□□□ -0.56
CAPN1-211ENST00000527739 ZNF625Q96I27 306 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-211ENST00000527739 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
CAPN1-211ENST00000527739 BCE1O60756 84 aa11.56□□□□□ -0.56
CAPN1-211ENST00000527739 RPL28P46779 137 aaKnown RBP11.56□□□□□ -0.56
CAPN1-211ENST00000527739 CHTOPQ9Y3Y2 248 aaKnown RBP11.56□□□□□ -0.56
CAPN1-211ENST00000527739 ERG28Q9UKR5 140 aa11.55□□□□□ -0.56
CAPN1-211ENST00000527739 RPL13AP40429 203 aaKnown RBP11.54□□□□□ -0.56
CAPN1-211ENST00000527739 SCO1O75880 301 aa11.53□□□□□ -0.56
CAPN1-211ENST00000527739 IGLV5-37A0A075B6J1 123 aa11.52□□□□□ -0.57
CAPN1-211ENST00000527739 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.57
CAPN1-211ENST00000527739 IGKV2D-28P01615 120 aa11.52□□□□□ -0.57
CAPN1-211ENST00000527739 UBE2AP49459 152 aa11.52□□□□□ -0.57
CAPN1-211ENST00000527739 CHCHD1Q96BP2 118 aaKnown RBP11.52□□□□□ -0.57
CAPN1-211ENST00000527739 YPEL4Q96NS1 127 aa11.52□□□□□ -0.57
CAPN1-211ENST00000527739 SND1-IT1Q9HBX3 110 aa11.52□□□□□ -0.57
CAPN1-211ENST00000527739 CBLN2Q8IUK8 224 aa11.51□□□□□ -0.57
CAPN1-211ENST00000527739 IFI27L1Q96BM0 104 aa11.51□□□□□ -0.57
CAPN1-211ENST00000527739 RPL24P83731 157 aaKnown RBP11.49□□□□□ -0.57
CAPN1-211ENST00000527739 COX17Q14061 63 aa11.49□□□□□ -0.57
CAPN1-211ENST00000527739 A0A0U1RRA0 63 aa11.48□□□□□ -0.57
CAPN1-211ENST00000527739 LINC00158P58513 81 aa11.48□□□□□ -0.57
CAPN1-211ENST00000527739 SFTA2Q6UW10 78 aa11.48□□□□□ -0.57
CAPN1-211ENST00000527739 TRAV12-1A0A0B4J245 112 aa11.47□□□□□ -0.57
CAPN1-211ENST00000527739 HSBP1O75506 76 aa11.47□□□□□ -0.57
CAPN1-211ENST00000527739 FAM19A2Q8N3H0 131 aa11.47□□□□□ -0.57
CAPN1-211ENST00000527739 H0Y8G0 127 aa11.46□□□□□ -0.57
CAPN1-211ENST00000527739 VPREB1P12018 145 aa11.46□□□□□ -0.57
CAPN1-211ENST00000527739 TMEM223A0PJW6 202 aa11.45□□□□□ -0.58
CAPN1-211ENST00000527739 ATP6V1G1O75348 118 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms