RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 H3BNG1 76 aa11.19□□□□□ -0.62
SNRNP35-204ENST00000527158 KPRPQ5T749 579 aaPredicted RBP11.19□□□□□ -0.62
SNRNP35-204ENST00000527158 XGP55808 180 aa11.18□□□□□ -0.62
SNRNP35-204ENST00000527158 LELP1Q5T871 98 aa11.18□□□□□ -0.62
SNRNP35-204ENST00000527158 C11orf45Q8TAV5 145 aa11.18□□□□□ -0.62
SNRNP35-204ENST00000527158 SMIM1B2RUZ4 78 aa11.18□□□□□ -0.62
SNRNP35-204ENST00000527158 MT-ATP8P03928 68 aa11.18□□□□□ -0.62
SNRNP35-204ENST00000527158 LINC00959A0A1B0GUT2 108 aa11.17□□□□□ -0.62
SNRNP35-204ENST00000527158 HERV-K104P63124 156 aa11.17□□□□□ -0.62
SNRNP35-204ENST00000527158 NTN5Q8WTR8 489 aaPredicted RBP11.17□□□□□ -0.62
SNRNP35-204ENST00000527158 UBE2WQ96B02 151 aa11.17□□□□□ -0.62
SNRNP35-204ENST00000527158 LST1O00453 97 aa11.16□□□□□ -0.62
SNRNP35-204ENST00000527158 SS18Q15532 418 aa11.16□□□□□ -0.62
SNRNP35-204ENST00000527158 C2orf82Q6UX34 121 aa11.16□□□□□ -0.62
SNRNP35-204ENST00000527158 MRAPQ8TCY5 172 aa11.16□□□□□ -0.62
SNRNP35-204ENST00000527158 TM2D3Q9BRN9 247 aa11.16□□□□□ -0.62
SNRNP35-204ENST00000527158 NANOS2P60321 138 aaKnown RBP11.16□□□□□ -0.62
SNRNP35-204ENST00000527158 LYPD5Q6UWN5 251 aa11.14□□□□□ -0.63
SNRNP35-204ENST00000527158 TRAV8-4A0A0B4J246 113 aa11.14□□□□□ -0.63
SNRNP35-204ENST00000527158 IGHV3OR16-9A0A0B4J2B5 98 aa11.14□□□□□ -0.63
SNRNP35-204ENST00000527158 ANGP03950 147 aaKnown RBP11.14□□□□□ -0.63
SNRNP35-204ENST00000527158 ANK2Q01484 3957 aa11.14□□□□□ -0.63
SNRNP35-204ENST00000527158 DNAH3Q8TD57 4116 aa11.14□□□□□ -0.63
SNRNP35-204ENST00000527158 DEFB131BA0A096LNP1 70 aa11.13□□□□□ -0.63
SNRNP35-204ENST00000527158 LINC00269Q8N2A0 174 aa11.13□□□□□ -0.63
SNRNP35-204ENST00000527158 LINC00308Q8TCZ7 52 aa11.13□□□□□ -0.63
SNRNP35-204ENST00000527158 Q9H8V8 135 aa11.13□□□□□ -0.63
SNRNP35-204ENST00000527158 NOTCH1P46531 2555 aa11.13□□□□□ -0.63
SNRNP35-204ENST00000527158 CLPSL2Q6UWE3 100 aa11.12□□□□□ -0.63
SNRNP35-204ENST00000527158 A0A087WZ39 114 aa11.11□□□□□ -0.63
SNRNP35-204ENST00000527158 FAM240AA0A1B0GVK7 77 aa11.11□□□□□ -0.63
SNRNP35-204ENST00000527158 SNCGO76070 127 aa11.11□□□□□ -0.63
SNRNP35-204ENST00000527158 Q6Q795 121 aa11.11□□□□□ -0.63
SNRNP35-204ENST00000527158 XCL1P47992 114 aa11.11□□□□□ -0.63
SNRNP35-204ENST00000527158 REG3AQ06141 175 aa11.1□□□□□ -0.63
SNRNP35-204ENST00000527158 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
SNRNP35-204ENST00000527158 NPC2P61916 151 aa11.1□□□□□ -0.63
SNRNP35-204ENST00000527158 ZNF625Q96I27 306 aaPredicted RBP11.1□□□□□ -0.63
SNRNP35-204ENST00000527158 Q8N3U1 123 aa11.09□□□□□ -0.63
SNRNP35-204ENST00000527158 COX7B2Q8TF08 81 aa11.09□□□□□ -0.63
SNRNP35-204ENST00000527158 TEX49A0A1B0GTD5 131 aa11.09□□□□□ -0.63
SNRNP35-204ENST00000527158 COX7A2LO14548 114 aa11.09□□□□□ -0.63
SNRNP35-204ENST00000527158 GAGE2BQ13066 116 aa11.08□□□□□ -0.64
SNRNP35-204ENST00000527158 GAGE2EQ4V326 116 aa11.08□□□□□ -0.64
SNRNP35-204ENST00000527158 MEIG1Q5JSS6 88 aa11.08□□□□□ -0.64
SNRNP35-204ENST00000527158 TOMM7Q9P0U1 55 aa11.08□□□□□ -0.64
SNRNP35-204ENST00000527158 GAGE2DQ9UEU5 116 aa11.08□□□□□ -0.64
SNRNP35-204ENST00000527158 NBEAL1Q6ZS30 2694 aa11.07□□□□□ -0.64
SNRNP35-204ENST00000527158 TRAV10A0A0B4J240 114 aa11.07□□□□□ -0.64
SNRNP35-204ENST00000527158 CD164L2Q6UWJ8 174 aa11.07□□□□□ -0.64
SNRNP35-204ENST00000527158 CLEC2BQ92478 149 aa11.07□□□□□ -0.64
SNRNP35-204ENST00000527158 CHCHD10Q8WYQ3 142 aaPredicted RBP11.06□□□□□ -0.64
SNRNP35-204ENST00000527158 LINC01561Q8N1V8 128 aa11.06□□□□□ -0.64
SNRNP35-204ENST00000527158 DAND5Q8N907 189 aa11.06□□□□□ -0.64
SNRNP35-204ENST00000527158 TRACP01848 142 aa11.05□□□□□ -0.64
SNRNP35-204ENST00000527158 ACYP1P07311 99 aa11.05□□□□□ -0.64
SNRNP35-204ENST00000527158 KLK12Q9UKR0 248 aa11.05□□□□□ -0.64
SNRNP35-204ENST00000527158 MGAM2Q2M2H8 2515 aa11.05□□□□□ -0.64
SNRNP35-204ENST00000527158 IGLV10-54A0A075B6I4 117 aa11.04□□□□□ -0.64
SNRNP35-204ENST00000527158 ANAPC13Q9BS18 74 aa11.04□□□□□ -0.64
SNRNP35-204ENST00000527158 TENM3Q9P273 2699 aa11.04□□□□□ -0.64
SNRNP35-204ENST00000527158 TRAV13-2A0A0B4J235 113 aa11.04□□□□□ -0.64
SNRNP35-204ENST00000527158 ESRGQ1W209 222 aa11.04□□□□□ -0.64
SNRNP35-204ENST00000527158 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
SNRNP35-204ENST00000527158 C6orf226Q5I0X4 101 aa11.03□□□□□ -0.64
SNRNP35-204ENST00000527158 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.65
SNRNP35-204ENST00000527158 CRPP02741 224 aa11.01□□□□□ -0.65
SNRNP35-204ENST00000527158 MALP21145 153 aa11.01□□□□□ -0.65
SNRNP35-204ENST00000527158 C15orf53Q8NAA6 179 aa11.01□□□□□ -0.65
SNRNP35-204ENST00000527158 A0A0U1RRA0 63 aa11.01□□□□□ -0.65
SNRNP35-204ENST00000527158 SOSTDC1Q6X4U4 206 aa11.01□□□□□ -0.65
SNRNP35-204ENST00000527158 TTC32Q5I0X7 151 aa11□□□□□ -0.65
SNRNP35-204ENST00000527158 Q8IZM0 81 aa11□□□□□ -0.65
SNRNP35-204ENST00000527158 ENHOQ6UWT2 76 aa11□□□□□ -0.65
SNRNP35-204ENST00000527158 RPL28P46779 137 aaKnown RBP10.98□□□□□ -0.65
SNRNP35-204ENST00000527158 NDUFV3P56181 108 aaKnown RBP10.98□□□□□ -0.65
SNRNP35-204ENST00000527158 B9D2Q9BPU9 175 aa10.98□□□□□ -0.65
SNRNP35-204ENST00000527158 CFAP161Q6P656 301 aa10.97□□□□□ -0.65
SNRNP35-204ENST00000527158 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
SNRNP35-204ENST00000527158 LINC00158P58513 81 aa10.96□□□□□ -0.66
SNRNP35-204ENST00000527158 LINC01556Q5JQF7 62 aa10.96□□□□□ -0.66
SNRNP35-204ENST00000527158 IMUPQ9GZP8 106 aa10.95□□□□□ -0.66
SNRNP35-204ENST00000527158 INAFM2P0DMQ5 153 aa10.94□□□□□ -0.66
SNRNP35-204ENST00000527158 CXCL5P42830 114 aa10.94□□□□□ -0.66
SNRNP35-204ENST00000527158 TRBV7-7A0A0K0K1E9 115 aa10.94□□□□□ -0.66
SNRNP35-204ENST00000527158 KLK5Q9Y337 293 aaPredicted RBP10.94□□□□□ -0.66
SNRNP35-204ENST00000527158 H0YGX0 51 aa10.93□□□□□ -0.66
SNRNP35-204ENST00000527158 KIAA0087Q14695 138 aa10.93□□□□□ -0.66
SNRNP35-204ENST00000527158 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
SNRNP35-204ENST00000527158 SND1-IT1Q9HBX3 110 aa10.93□□□□□ -0.66
SNRNP35-204ENST00000527158 BAALC-AS2P0C853 105 aa10.93□□□□□ -0.66
SNRNP35-204ENST00000527158 CCL18P55774 89 aa10.93□□□□□ -0.66
SNRNP35-204ENST00000527158 PFN2P35080 140 aa10.92□□□□□ -0.66
SNRNP35-204ENST00000527158 NHLRC4P0CG21 123 aaPredicted RBP10.9□□□□□ -0.66
SNRNP35-204ENST00000527158 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
SNRNP35-204ENST00000527158 LINC00588Q9Y4M8 146 aa10.9□□□□□ -0.66
SNRNP35-204ENST00000527158 SPAG11BQ08648 103 aa10.9□□□□□ -0.66
SNRNP35-204ENST00000527158 LINC00643Q86TS7 51 aa10.89□□□□□ -0.67
SNRNP35-204ENST00000527158 DNAL4O96015 105 aa10.88□□□□□ -0.67
SNRNP35-204ENST00000527158 C1orf43Q9BWL3 253 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms