RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 CHCHD10Q8WYQ3 142 aaPredicted RBP3.57□□□□□ -1.84
C11orf54-203ENST00000526335 PI4KAP42356 2102 aa3.57□□□□□ -1.84
C11orf54-203ENST00000526335 TENM4Q6N022 2769 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 DSCAMO60469 2012 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 SMG1Q96Q15 3661 aaKnown RBP3.56□□□□□ -1.84
C11orf54-203ENST00000526335 IGHV3OR16-13A0A075B7E8 117 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 RNASE3P12724 160 aaKnown RBP3.56□□□□□ -1.84
C11orf54-203ENST00000526335 RPL39P62891 51 aaKnown RBP3.56□□□□□ -1.84
C11orf54-203ENST00000526335 KIAA0087Q14695 138 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 RBMY1FQ15415 496 aaKnown RBP3.56□□□□□ -1.84
C11orf54-203ENST00000526335 PRR9Q5T870 116 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 ZFAND2AQ8N6M9 145 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 C20orf203Q8NBC4 194 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 DHRS4-AS1Q9P1J3 65 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 DPM3Q9P2X0 92 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 NDUFA12Q9UI09 145 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 LINC00588Q9Y4M8 146 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 S4R3C0 116 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 TEX15Q9BXT5 2789 aa3.56□□□□□ -1.84
C11orf54-203ENST00000526335 SDK2Q58EX2 2172 aa3.55□□□□□ -1.84
C11orf54-203ENST00000526335 IGHV3OR16-10A0A075B7F0 116 aa3.55□□□□□ -1.84
C11orf54-203ENST00000526335 CLPSL1A2RUU4 121 aa3.55□□□□□ -1.84
C11orf54-203ENST00000526335 BAALC-AS2P0C853 105 aa3.55□□□□□ -1.84
C11orf54-203ENST00000526335 COX7A1P24310 79 aa3.55□□□□□ -1.84
C11orf54-203ENST00000526335 SYNJ2BPP57105 145 aa3.55□□□□□ -1.84
C11orf54-203ENST00000526335 CIRBPQ14011 172 aaKnown RBP3.55□□□□□ -1.84
C11orf54-203ENST00000526335 ITPR3Q14573 2671 aa3.55□□□□□ -1.84
C11orf54-203ENST00000526335 POLEQ07864 2286 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 COL27A1Q8IZC6 1860 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-203ENST00000526335 NDUFA1O15239 70 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 BCE1O60756 84 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 IGHV3-23P01764 117 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 S100A7L2Q5SY68 101 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 VMO1Q7Z5L0 202 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 Q8N2B8 174 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 Q8N6K4 173 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 CSNK1G2-AS1Q8NCQ2 148 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 UBR5O95071 2799 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-203ENST00000526335 CFAP46Q8IYW2 2715 aa3.54□□□□□ -1.84
C11orf54-203ENST00000526335 LOC400499M0QZD8 3231 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 IGHV3-64A0A075B6Q5 118 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 ODF3BA8MYP8 253 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 GNRH2O43555 120 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 PRM2P04554 102 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 NDPQ00604 133 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 ATP5EP2Q5VTU8 51 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 SCXQ7RTU7 201 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 Q8N377 158 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 RNASE6Q93091 150 aaKnown RBP3.53□□□□□ -1.84
C11orf54-203ENST00000526335 TMEM243Q9BU79 118 aa3.53□□□□□ -1.84
C11orf54-203ENST00000526335 ZNF706Q9Y5V0 76 aaPredicted RBP3.53□□□□□ -1.84
C11orf54-203ENST00000526335 IGHV7-81A0A0B4J1V7 117 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 IGHV3-66A0A0C4DH42 116 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 M0QY20 66 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 M0R1W7 72 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 DNAL4O96015 105 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 CD28P10747 220 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 UBE2AP49459 152 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 SS18Q15532 418 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 C15orf32Q32M92 178 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 LINC01554Q52M75 96 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 MINOS1Q5TGZ0 78 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 C7orf65Q6ZTY9 151 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.52□□□□□ -1.85
C11orf54-203ENST00000526335 LINC00308Q8TCZ7 52 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 DIRC1Q969H9 104 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 OBSCN-AS1Q96MR7 158 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 C22orf24Q9Y442 160 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 MINOS1-NBL1R4GNA1 71 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 NAV3Q8IVL0 2385 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 KNL1Q8NG31 2342 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 PCNX1Q96RV3 2341 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 POLQO75417 2590 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 DOCK10Q96BY6 2186 aa3.52□□□□□ -1.85
C11orf54-203ENST00000526335 TRBV10-3A0A0K0K1G6 114 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 NDUFC1O43677 76 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 FUSP35637 526 aaKnown RBP eCLIP3.51□□□□□ -1.85
C11orf54-203ENST00000526335 RPL28P46779 137 aaKnown RBP3.51□□□□□ -1.85
C11orf54-203ENST00000526335 BLCAPP62952 87 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 CYSTM1Q9H1C7 97 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 UBE2D4Q9Y2X8 147 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 SPTBN1Q01082 2364 aaKnown RBP3.51□□□□□ -1.85
C11orf54-203ENST00000526335 KALRNO60229 2985 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 IGHV3OR16-8A0A075B7F1 116 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 TRAV13-2A0A0B4J235 113 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 TRAV12-3A0A0B4J271 114 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 IGHV3-35A0A0C4DH35 117 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 IGKV3D-7A0A0C4DH55 119 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 H0YGX0 51 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 CCKP06307 115 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 ATP11AUNQ6ZP68 121 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 FDCSPQ8NFU4 85 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 FAM215AQ9Y5M1 114 aa3.51□□□□□ -1.85
C11orf54-203ENST00000526335 ICE1Q9Y2F5 2266 aa3.5□□□□□ -1.85
C11orf54-203ENST00000526335 A0A1B0GW54 56 aa3.5□□□□□ -1.85
C11orf54-203ENST00000526335 FAM223BA6NKX1 122 aa3.5□□□□□ -1.85
C11orf54-203ENST00000526335 NDUFA4O00483 81 aa3.5□□□□□ -1.85
C11orf54-203ENST00000526335 PRB3Q04118 309 aaPredicted RBP3.5□□□□□ -1.85
C11orf54-203ENST00000526335 BSPH1Q075Z2 132 aa3.5□□□□□ -1.85
C11orf54-203ENST00000526335 FAM223AQ8IWN6 122 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms