RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 CKS1BP61024 79 aa7.28□□□□□ -1.24
SSBP3-210ENST00000525990 HERVK_113P63121 156 aa7.28□□□□□ -1.24
SSBP3-210ENST00000525990 C6orf226Q5I0X4 101 aa7.28□□□□□ -1.24
SSBP3-210ENST00000525990 SCGB3A1Q96QR1 104 aa7.28□□□□□ -1.24
SSBP3-210ENST00000525990 SMIM1B2RUZ4 78 aa7.27□□□□□ -1.25
SSBP3-210ENST00000525990 KRTAP1-4P0C5Y4 121 aa7.27□□□□□ -1.25
SSBP3-210ENST00000525990 ERASQ7Z444 233 aa7.27□□□□□ -1.25
SSBP3-210ENST00000525990 COMMD7Q86VX2 200 aa7.27□□□□□ -1.25
SSBP3-210ENST00000525990 DIRC1Q969H9 104 aa7.27□□□□□ -1.25
SSBP3-210ENST00000525990 SEC11CQ9BY50 192 aa7.27□□□□□ -1.25
SSBP3-210ENST00000525990 GEMIN7Q9H840 131 aaKnown RBP7.27□□□□□ -1.25
SSBP3-210ENST00000525990 TRAV9-1A0A075B6T8 112 aa7.26□□□□□ -1.25
SSBP3-210ENST00000525990 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
SSBP3-210ENST00000525990 GNB1LQ9BYB4 327 aa7.26□□□□□ -1.25
SSBP3-210ENST00000525990 F8VRH5 84 aa7.25□□□□□ -1.25
SSBP3-210ENST00000525990 SPINK8P0C7L1 97 aa7.25□□□□□ -1.25
SSBP3-210ENST00000525990 PAPPA-AS1Q5QFB9 102 aa7.25□□□□□ -1.25
SSBP3-210ENST00000525990 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
SSBP3-210ENST00000525990 C22orf24Q9Y442 160 aa7.25□□□□□ -1.25
SSBP3-210ENST00000525990 TINCRA0A1B0GVN0 87 aa7.24□□□□□ -1.25
SSBP3-210ENST00000525990 S100PP25815 95 aa7.24□□□□□ -1.25
SSBP3-210ENST00000525990 SEC11AP67812 179 aa7.24□□□□□ -1.25
SSBP3-210ENST00000525990 CST9LQ9H4G1 147 aa7.24□□□□□ -1.25
SSBP3-210ENST00000525990 IGLV5-45A0A087WSX0 123 aa7.23□□□□□ -1.25
SSBP3-210ENST00000525990 A0A096LNJ9 63 aa7.23□□□□□ -1.25
SSBP3-210ENST00000525990 FABP9Q0Z7S8 132 aa7.23□□□□□ -1.25
SSBP3-210ENST00000525990 C10orf91Q5T1B1 145 aa7.23□□□□□ -1.25
SSBP3-210ENST00000525990 COX7B2Q8TF08 81 aa7.23□□□□□ -1.25
SSBP3-210ENST00000525990 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
SSBP3-210ENST00000525990 RPS10P5Q9NQ39 176 aa7.23□□□□□ -1.25
SSBP3-210ENST00000525990 RNF213Q63HN8 5207 aa7.22□□□□□ -1.25
SSBP3-210ENST00000525990 G0S2P27469 103 aa7.22□□□□□ -1.25
SSBP3-210ENST00000525990 FA2HQ7L5A8 372 aa7.22□□□□□ -1.25
SSBP3-210ENST00000525990 LPAP08519 4548 aa7.21□□□□□ -1.25
SSBP3-210ENST00000525990 RAB5BP61020 215 aa7.21□□□□□ -1.26
SSBP3-210ENST00000525990 PMVKQ15126 192 aa7.21□□□□□ -1.26
SSBP3-210ENST00000525990 PMCHL1Q16048 86 aa7.21□□□□□ -1.26
SSBP3-210ENST00000525990 PDZD11Q5EBL8 140 aa7.21□□□□□ -1.26
SSBP3-210ENST00000525990 CARHSP1Q9Y2V2 147 aaKnown RBP7.21□□□□□ -1.26
SSBP3-210ENST00000525990 RPL37AP8A6NKH3 93 aa7.2□□□□□ -1.26
SSBP3-210ENST00000525990 SCO1O75880 301 aa7.2□□□□□ -1.26
SSBP3-210ENST00000525990 CXCL5P42830 114 aa7.2□□□□□ -1.26
SSBP3-210ENST00000525990 MRPL55Q7Z7F7 128 aaKnown RBP7.2□□□□□ -1.26
SSBP3-210ENST00000525990 SMCO4Q9NRQ5 59 aa7.2□□□□□ -1.26
SSBP3-210ENST00000525990 GAGE10A6NGK3 116 aa7.19□□□□□ -1.26
SSBP3-210ENST00000525990 ZNF861PO60384 105 aa7.19□□□□□ -1.26
SSBP3-210ENST00000525990 RHEBQ15382 184 aa7.19□□□□□ -1.26
SSBP3-210ENST00000525990 C18orf32Q8TCD1 76 aa7.19□□□□□ -1.26
SSBP3-210ENST00000525990 IGLV1-50A0A075B6I6 118 aa7.18□□□□□ -1.26
SSBP3-210ENST00000525990 NDUFA6P56556 154 aa7.18□□□□□ -1.26
SSBP3-210ENST00000525990 LINC00167Q96N53 147 aa7.18□□□□□ -1.26
SSBP3-210ENST00000525990 IGLC3P0DOY3 106 aa7.17□□□□□ -1.26
SSBP3-210ENST00000525990 ZNF22P17026 224 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-210ENST00000525990 COX19Q49B96 90 aa7.17□□□□□ -1.26
SSBP3-210ENST00000525990 TP73-AS1Q9UF72 201 aa7.17□□□□□ -1.26
SSBP3-210ENST00000525990 TRAPPC1Q9Y5R8 145 aa7.17□□□□□ -1.26
SSBP3-210ENST00000525990 IGLV5-39A0A0G2JS06 123 aa7.16□□□□□ -1.26
SSBP3-210ENST00000525990 LINC01549A6NIU2 74 aa7.16□□□□□ -1.26
SSBP3-210ENST00000525990 NUPR1O60356 82 aa7.16□□□□□ -1.26
SSBP3-210ENST00000525990 LBHQ53QV2 105 aaPredicted RBP7.16□□□□□ -1.26
SSBP3-210ENST00000525990 A0A087X002 238 aa7.15□□□□□ -1.26
SSBP3-210ENST00000525990 BCE1O60756 84 aa7.15□□□□□ -1.26
SSBP3-210ENST00000525990 APOC3P02656 99 aa7.15□□□□□ -1.26
SSBP3-210ENST00000525990 PFN2P35080 140 aa7.15□□□□□ -1.26
SSBP3-210ENST00000525990 ANAPC11Q9NYG5 84 aa7.15□□□□□ -1.26
SSBP3-210ENST00000525990 IGLV5-37A0A075B6J1 123 aa7.14□□□□□ -1.27
SSBP3-210ENST00000525990 C11orf86A6NJI1 115 aa7.14□□□□□ -1.27
SSBP3-210ENST00000525990 H3BRM9 83 aa7.14□□□□□ -1.27
SSBP3-210ENST00000525990 HBDP02042 147 aa7.14□□□□□ -1.27
SSBP3-210ENST00000525990 LINC00614P0C842 121 aa7.14□□□□□ -1.27
SSBP3-210ENST00000525990 Q8NDZ9 215 aa7.14□□□□□ -1.27
SSBP3-210ENST00000525990 ZNF625Q96I27 306 aaPredicted RBP7.14□□□□□ -1.27
SSBP3-210ENST00000525990 IGKV2-28A0A075B6P5 120 aa7.13□□□□□ -1.27
SSBP3-210ENST00000525990 ATP5LO75964 103 aa7.13□□□□□ -1.27
SSBP3-210ENST00000525990 IGKV2D-28P01615 120 aa7.13□□□□□ -1.27
SSBP3-210ENST00000525990 RPL13AP40429 203 aaKnown RBP7.12□□□□□ -1.27
SSBP3-210ENST00000525990 KRTAP13-1Q8IUC0 172 aa7.12□□□□□ -1.27
SSBP3-210ENST00000525990 NKAPP1Q8N9T2 125 aa7.12□□□□□ -1.27
SSBP3-210ENST00000525990 SND1-IT1Q9HBX3 110 aa7.12□□□□□ -1.27
SSBP3-210ENST00000525990 TSPAN13O95857 204 aa7.11□□□□□ -1.27
SSBP3-210ENST00000525990 VPREB1P12018 145 aa7.11□□□□□ -1.27
SSBP3-210ENST00000525990 RPL28P46779 137 aaKnown RBP7.11□□□□□ -1.27
SSBP3-210ENST00000525990 BAGE3Q86Y29 109 aa7.11□□□□□ -1.27
SSBP3-210ENST00000525990 YPEL4Q96NS1 127 aa7.11□□□□□ -1.27
SSBP3-210ENST00000525990 ERG28Q9UKR5 140 aa7.11□□□□□ -1.27
SSBP3-210ENST00000525990 TMEM238C9JI98 176 aa7.1□□□□□ -1.27
SSBP3-210ENST00000525990 PRLHP81277 87 aa7.1□□□□□ -1.27
SSBP3-210ENST00000525990 PRR4Q16378 134 aa7.1□□□□□ -1.27
SSBP3-210ENST00000525990 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
SSBP3-210ENST00000525990 TMEM170BQ5T4T1 132 aa7.1□□□□□ -1.27
SSBP3-210ENST00000525990 SNAPINO95295 136 aa7.08□□□□□ -1.28
SSBP3-210ENST00000525990 UBE2AP49459 152 aa7.08□□□□□ -1.28
SSBP3-210ENST00000525990 SVBPQ8N300 66 aa7.08□□□□□ -1.28
SSBP3-210ENST00000525990 A0A0U1RRA0 63 aa7.07□□□□□ -1.28
SSBP3-210ENST00000525990 TYMSOSQ8TAI1 123 aa7.07□□□□□ -1.28
SSBP3-210ENST00000525990 CHTOPQ9Y3Y2 248 aaKnown RBP7.07□□□□□ -1.28
SSBP3-210ENST00000525990 CRYGAP11844 174 aa7.06□□□□□ -1.28
SSBP3-210ENST00000525990 CBLN2Q8IUK8 224 aa7.06□□□□□ -1.28
SSBP3-210ENST00000525990 TMEM126AQ9H061 195 aa7.06□□□□□ -1.28
SSBP3-210ENST00000525990 TMEM223A0PJW6 202 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms