RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 NXT2Q9NPJ8 142 aaKnown RBP5.46□□□□□ -1.54
CTNNA1-240ENST00000523912 NDUFC2-KCTD14E9PQ53 114 aa5.45□□□□□ -1.54
CTNNA1-240ENST00000523912 M0QXV9 152 aa5.45□□□□□ -1.54
CTNNA1-240ENST00000523912 C10orf25Q5T742 122 aa5.45□□□□□ -1.54
CTNNA1-240ENST00000523912 ALKBH7Q9BT30 221 aaPredicted RBP5.45□□□□□ -1.54
CTNNA1-240ENST00000523912 IGLV7-43P04211 117 aa5.44□□□□□ -1.54
CTNNA1-240ENST00000523912 KRTAP10-8P60410 259 aa5.44□□□□□ -1.54
CTNNA1-240ENST00000523912 HERVK_113P63121 156 aa5.44□□□□□ -1.54
CTNNA1-240ENST00000523912 GEMIN7Q9H840 131 aaKnown RBP5.44□□□□□ -1.54
CTNNA1-240ENST00000523912 TOMM7Q9P0U1 55 aa5.44□□□□□ -1.54
CTNNA1-240ENST00000523912 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
CTNNA1-240ENST00000523912 COLCA2A8K830 154 aa5.43□□□□□ -1.54
CTNNA1-240ENST00000523912 SCO1O75880 301 aa5.43□□□□□ -1.54
CTNNA1-240ENST00000523912 KIAA0087Q14695 138 aa5.43□□□□□ -1.54
CTNNA1-240ENST00000523912 C6orf226Q5I0X4 101 aa5.43□□□□□ -1.54
CTNNA1-240ENST00000523912 C2orf82Q6UX34 121 aa5.43□□□□□ -1.54
CTNNA1-240ENST00000523912 Q8IZM0 81 aa5.43□□□□□ -1.54
CTNNA1-240ENST00000523912 AMELXQ99217 191 aa5.43□□□□□ -1.54
CTNNA1-240ENST00000523912 TIMM17AQ99595 171 aa5.43□□□□□ -1.54
CTNNA1-240ENST00000523912 LINC01549A6NIU2 74 aa5.42□□□□□ -1.54
CTNNA1-240ENST00000523912 IGIPA6NJ69 53 aa5.42□□□□□ -1.54
CTNNA1-240ENST00000523912 H0Y9J4 135 aa5.42□□□□□ -1.54
CTNNA1-240ENST00000523912 CXCL5P42830 114 aa5.42□□□□□ -1.54
CTNNA1-240ENST00000523912 C18orf32Q8TCD1 76 aa5.42□□□□□ -1.54
CTNNA1-240ENST00000523912 LINC01546A6NGU7 62 aa5.41□□□□□ -1.54
CTNNA1-240ENST00000523912 TRGC2P03986 189 aa5.41□□□□□ -1.54
CTNNA1-240ENST00000523912 ODF1Q14990 250 aa5.41□□□□□ -1.54
CTNNA1-240ENST00000523912 LBHQ53QV2 105 aaPredicted RBP5.41□□□□□ -1.54
CTNNA1-240ENST00000523912 LINC00173Q6ZV60 143 aa5.41□□□□□ -1.54
CTNNA1-240ENST00000523912 FA2HQ7L5A8 372 aa5.41□□□□□ -1.54
CTNNA1-240ENST00000523912 FAM19A3Q7Z5A8 133 aa5.41□□□□□ -1.54
CTNNA1-240ENST00000523912 LINC00469Q8N7U9 141 aa5.41□□□□□ -1.54
CTNNA1-240ENST00000523912 TOMM6Q96B49 74 aa5.41□□□□□ -1.54
CTNNA1-240ENST00000523912 IGLV1-50A0A075B6I6 118 aa5.4□□□□□ -1.54
CTNNA1-240ENST00000523912 F8VRH5 84 aa5.4□□□□□ -1.54
CTNNA1-240ENST00000523912 C9orf129Q5T035 196 aaKnown RBP5.4□□□□□ -1.54
CTNNA1-240ENST00000523912 ZC2HC1BQ5TFG8 222 aa5.4□□□□□ -1.54
CTNNA1-240ENST00000523912 SCGB3A1Q96QR1 104 aa5.4□□□□□ -1.54
CTNNA1-240ENST00000523912 NUPR1O60356 82 aa5.39□□□□□ -1.55
CTNNA1-240ENST00000523912 RPL13AP40429 203 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-240ENST00000523912 RAB5BP61020 215 aa5.39□□□□□ -1.55
CTNNA1-240ENST00000523912 ERASQ7Z444 233 aa5.39□□□□□ -1.55
CTNNA1-240ENST00000523912 CDKN2A-AS1Q9UH64 79 aa5.39□□□□□ -1.55
CTNNA1-240ENST00000523912 PDZD11Q5EBL8 140 aa5.38□□□□□ -1.55
CTNNA1-240ENST00000523912 PRR26Q8N8Z3 221 aa5.38□□□□□ -1.55
CTNNA1-240ENST00000523912 TINCRA0A1B0GVN0 87 aa5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 H3BRM9 83 aa5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 LINC00614P0C842 121 aa5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 KRTAP11-1Q8IUC1 163 aa5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 COX7B2Q8TF08 81 aa5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 CHCHD1Q96BP2 118 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 URB1-AS1Q96HZ7 61 aa5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 XAGE1AQ9HD64 81 aa5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 TP73-AS1Q9UF72 201 aa5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
CTNNA1-240ENST00000523912 SMIM1B2RUZ4 78 aa5.36□□□□□ -1.55
CTNNA1-240ENST00000523912 ZNF861PO60384 105 aa5.36□□□□□ -1.55
CTNNA1-240ENST00000523912 HBDP02042 147 aa5.36□□□□□ -1.55
CTNNA1-240ENST00000523912 RPL28P46779 137 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-240ENST00000523912 MRPL55Q7Z7F7 128 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-240ENST00000523912 BAGE3Q86Y29 109 aa5.36□□□□□ -1.55
CTNNA1-240ENST00000523912 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
CTNNA1-240ENST00000523912 C22orf24Q9Y442 160 aa5.36□□□□□ -1.55
CTNNA1-240ENST00000523912 IGLV5-45A0A087WSX0 123 aa5.35□□□□□ -1.55
CTNNA1-240ENST00000523912 A0A096LNJ9 63 aa5.35□□□□□ -1.55
CTNNA1-240ENST00000523912 ATP5LO75964 103 aa5.35□□□□□ -1.55
CTNNA1-240ENST00000523912 PMVKQ15126 192 aa5.35□□□□□ -1.55
CTNNA1-240ENST00000523912 CST9LQ9H4G1 147 aa5.35□□□□□ -1.55
CTNNA1-240ENST00000523912 BCE1O60756 84 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST1H2BKO60814 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HSBP1O75506 76 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 SERF1AO75920 110 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST1H2BJP06899 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 SPINK8P0C7L1 97 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST1H2BOP23527 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST1H2BBP33778 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST1H2BDP58876 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 LINC00310P59036 64 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST1H2BCP62807 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 PMCHL1Q16048 86 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST2H2BEQ16778 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 NKAPP1Q8N9T2 125 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST1H2BHQ93079 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST1H2BNQ99877 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 HIST1H2BMQ99879 126 aa5.34□□□□□ -1.55
CTNNA1-240ENST00000523912 KRTAP1-4P0C5Y4 121 aa5.33□□□□□ -1.56
CTNNA1-240ENST00000523912 NDUFA6P56556 154 aa5.32□□□□□ -1.56
CTNNA1-240ENST00000523912 GAGE10A6NGK3 116 aa5.31□□□□□ -1.56
CTNNA1-240ENST00000523912 IGLC3P0DOY3 106 aa5.31□□□□□ -1.56
CTNNA1-240ENST00000523912 UBE2AP49459 152 aa5.31□□□□□ -1.56
CTNNA1-240ENST00000523912 SFTA2Q6UW10 78 aa5.31□□□□□ -1.56
CTNNA1-240ENST00000523912 IGLV5-37A0A075B6J1 123 aa5.3□□□□□ -1.56
CTNNA1-240ENST00000523912 RPL37AP8A6NKH3 93 aa5.3□□□□□ -1.56
CTNNA1-240ENST00000523912 CRYGAP11844 174 aa5.3□□□□□ -1.56
CTNNA1-240ENST00000523912 COA6Q5JTJ3 125 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-240ENST00000523912 FAM19A2Q8N3H0 131 aa5.3□□□□□ -1.56
CTNNA1-240ENST00000523912 IFI27L1Q96BM0 104 aa5.3□□□□□ -1.56
CTNNA1-240ENST00000523912 LINC00167Q96N53 147 aa5.3□□□□□ -1.56
CTNNA1-240ENST00000523912 LEPROTL1O95214 131 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms