RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 ELOF1P60002 83 aaKnown RBP2.42□□□□□ -2.02
SKP1-211ENST00000523359 ZNF56Q15929 161 aa2.42□□□□□ -2.02
SKP1-211ENST00000523359 Q86TA4 180 aa2.42□□□□□ -2.02
SKP1-211ENST00000523359 MRPL36Q9P0J6 103 aaKnown RBP2.42□□□□□ -2.02
SKP1-211ENST00000523359 LENEPQ9Y5L5 61 aa2.42□□□□□ -2.02
SKP1-211ENST00000523359 PRRC2BQ5JSZ5 2229 aaKnown RBP2.42□□□□□ -2.02
SKP1-211ENST00000523359 A0A0G2JQZ4 141 aa2.41□□□□□ -2.02
SKP1-211ENST00000523359 CHKB-CPT1BH3BT56 60 aa2.41□□□□□ -2.02
SKP1-211ENST00000523359 HMGN2P05204 90 aaKnown RBP2.41□□□□□ -2.02
SKP1-211ENST00000523359 PDE6GP18545 87 aa2.41□□□□□ -2.02
SKP1-211ENST00000523359 FXYD6P3P58550 94 aa2.41□□□□□ -2.02
SKP1-211ENST00000523359 DEFB134Q4QY38 66 aa2.41□□□□□ -2.02
SKP1-211ENST00000523359 UNC80Q8N2C7 3258 aa2.41□□□□□ -2.02
SKP1-211ENST00000523359 LY75O60449 1722 aa2.41□□□□□ -2.02
SKP1-211ENST00000523359 DOPEY1Q5JWR5 2465 aa2.41□□□□□ -2.02
SKP1-211ENST00000523359 TNRC6CQ9HCJ0 1690 aaKnown RBP2.41□□□□□ -2.02
SKP1-211ENST00000523359 UNC13CQ8NB66 2214 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 IGLV3-32A0A0A0MS00 114 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 IGKV2-24A0A0C4DH68 120 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 MYMXA0A1B0GTQ4 84 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 HIGD1CA8MV81 97 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 PIN1P1O15428 100 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 RNASE3P12724 160 aaKnown RBP2.4□□□□□ -2.03
SKP1-211ENST00000523359 GCHFRP30047 84 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 ESPL1Q14674 2120 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 BRD3OSQ6XYD6 125 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 RPS27LQ71UM5 84 aaKnown RBP2.4□□□□□ -2.03
SKP1-211ENST00000523359 DYNLRB1Q9NP97 96 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 TMEM14BQ9NUH8 114 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 LOC285556D6RIA3 1793 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 COL5A1P20908 1838 aaPredicted RBP2.4□□□□□ -2.03
SKP1-211ENST00000523359 ARFGEF1Q9Y6D6 1849 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 VCANP13611 3396 aa2.4□□□□□ -2.03
SKP1-211ENST00000523359 PI4KAP42356 2102 aa2.39□□□□□ -2.03
SKP1-211ENST00000523359 TRBV6-4A0A1B0GX49 114 aa2.39□□□□□ -2.03
SKP1-211ENST00000523359 SMIM27A0A1W2PRY6 76 aa2.39□□□□□ -2.03
SKP1-211ENST00000523359 PPYP01298 95 aa2.39□□□□□ -2.03
SKP1-211ENST00000523359 IGLV3-1P01715 115 aa2.39□□□□□ -2.03
SKP1-211ENST00000523359 HILPDAQ9Y5L2 63 aa2.39□□□□□ -2.03
SKP1-211ENST00000523359 SPAG17Q6Q759 2223 aa2.39□□□□□ -2.03
SKP1-211ENST00000523359 ABCA2Q9BZC7 2435 aa2.39□□□□□ -2.03
SKP1-211ENST00000523359 MYO18BQ8IUG5 2567 aa2.39□□□□□ -2.03
SKP1-211ENST00000523359 FBN3Q75N90 2809 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 MKI67P46013 3256 aaKnown RBP2.38□□□□□ -2.03
SKP1-211ENST00000523359 SPTBP11277 2137 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 EPG5Q9HCE0 2579 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 TRBV6-8A0A0A6YYG3 113 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 F8WEM9 126 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 HMGN4O00479 90 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 DEFB123Q8N688 67 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 AMELXQ99217 191 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 V9GYV3 84 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 ABCA12Q86UK0 2595 aa2.38□□□□□ -2.03
SKP1-211ENST00000523359 ABCA4P78363 2273 aa2.37□□□□□ -2.03
SKP1-211ENST00000523359 A0A1W2PNN7 141 aa2.37□□□□□ -2.03
SKP1-211ENST00000523359 IQCF6A8MYZ5 107 aa2.37□□□□□ -2.03
SKP1-211ENST00000523359 SAA2P0DJI9 122 aaPredicted RBP2.37□□□□□ -2.03
SKP1-211ENST00000523359 CCL3L1P16619 93 aa2.37□□□□□ -2.03
SKP1-211ENST00000523359 C20orf197Q8N268 126 aa2.37□□□□□ -2.03
SKP1-211ENST00000523359 CEP290O15078 2479 aa2.37□□□□□ -2.03
SKP1-211ENST00000523359 ZFHX3Q15911 3703 aa2.37□□□□□ -2.03
SKP1-211ENST00000523359 TNRC6BQ9UPQ9 1833 aaKnown RBP2.37□□□□□ -2.03
SKP1-211ENST00000523359 ITPR3Q14573 2671 aa2.36□□□□□ -2.03
SKP1-211ENST00000523359 MYO7BQ6PIF6 2116 aa2.36□□□□□ -2.03
SKP1-211ENST00000523359 PAPPA2Q9BXP8 1791 aa2.36□□□□□ -2.03
SKP1-211ENST00000523359 FAM223BA6NKX1 122 aa2.36□□□□□ -2.03
SKP1-211ENST00000523359 IFI6P09912 130 aa2.36□□□□□ -2.03
SKP1-211ENST00000523359 ATXN8Q156A1 80 aa2.36□□□□□ -2.03
SKP1-211ENST00000523359 C10orf55Q5SWW7 151 aa2.36□□□□□ -2.03
SKP1-211ENST00000523359 COL4A1P02462 1669 aa2.36□□□□□ -2.03
SKP1-211ENST00000523359 TET1Q8NFU7 2136 aa2.36□□□□□ -2.03
SKP1-211ENST00000523359 ANKRD36A6QL64 1941 aa2.35□□□□□ -2.03
SKP1-211ENST00000523359 MUC6Q6W4X9 2439 aa2.35□□□□□ -2.03
SKP1-211ENST00000523359 IGKV3D-7A0A0C4DH55 119 aa2.35□□□□□ -2.03
SKP1-211ENST00000523359 IGKV3OR2-268A0A0C4DH90 116 aa2.35□□□□□ -2.03
SKP1-211ENST00000523359 A0A1B0GWA3 101 aa2.35□□□□□ -2.03
SKP1-211ENST00000523359 LOC730098B7Z3J9 87 aa2.35□□□□□ -2.03
SKP1-211ENST00000523359 SFTA2Q6UW10 78 aa2.35□□□□□ -2.03
SKP1-211ENST00000523359 PSENENQ9NZ42 101 aa2.35□□□□□ -2.03
SKP1-211ENST00000523359 SPTBN5Q9NRC6 3674 aaKnown RBP2.35□□□□□ -2.03
SKP1-211ENST00000523359 TTC28Q96AY4 2481 aa2.34□□□□□ -2.03
SKP1-211ENST00000523359 HECTD1Q9ULT8 2610 aa2.34□□□□□ -2.03
SKP1-211ENST00000523359 JMJD7-PLA2G4BH0Y9G9 81 aa2.34□□□□□ -2.03
SKP1-211ENST00000523359 H3BVH4 76 aa2.34□□□□□ -2.03
SKP1-211ENST00000523359 ASH1LQ9NR48 2969 aaKnown RBP2.34□□□□□ -2.03
SKP1-211ENST00000523359 TMEM167BQ9NRX6 74 aa2.34□□□□□ -2.03
SKP1-211ENST00000523359 LAMA2P24043 3122 aaKnown RBP2.34□□□□□ -2.04
SKP1-211ENST00000523359 NBDYA0A0U1RRE5 68 aa2.33□□□□□ -2.04
SKP1-211ENST00000523359 ZNF815PA8K554 130 aa2.33□□□□□ -2.04
SKP1-211ENST00000523359 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
SKP1-211ENST00000523359 HMGA1P17096 107 aaKnown RBP2.33□□□□□ -2.04
SKP1-211ENST00000523359 IFI27P40305 119 aaPredicted RBP2.33□□□□□ -2.04
SKP1-211ENST00000523359 CCL18P55774 89 aa2.33□□□□□ -2.04
SKP1-211ENST00000523359 PLGLAQ15195 96 aa2.33□□□□□ -2.04
SKP1-211ENST00000523359 FAM74A4Q5TZK3 123 aa2.33□□□□□ -2.04
SKP1-211ENST00000523359 Q6JHZ5 121 aa2.33□□□□□ -2.04
SKP1-211ENST00000523359 HCP5Q6MZN7 132 aa2.33□□□□□ -2.04
SKP1-211ENST00000523359 NHSQ6T4R5 1651 aa2.33□□□□□ -2.04
SKP1-211ENST00000523359 PCDH15Q96QU1 1955 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms