RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 SEC11AP67812 179 aa7.53□□□□□ -1.2
VEGFA-223ENST00000523125 C6orf226Q5I0X4 101 aa7.53□□□□□ -1.2
VEGFA-223ENST00000523125 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
VEGFA-223ENST00000523125 SCGB3A1Q96QR1 104 aa7.53□□□□□ -1.2
VEGFA-223ENST00000523125 M0QXV9 152 aa7.52□□□□□ -1.21
VEGFA-223ENST00000523125 PRSS2P07478 247 aa7.52□□□□□ -1.21
VEGFA-223ENST00000523125 S100PP25815 95 aa7.52□□□□□ -1.21
VEGFA-223ENST00000523125 CKS1BP61024 79 aa7.52□□□□□ -1.21
VEGFA-223ENST00000523125 GEMIN7Q9H840 131 aaKnown RBP7.52□□□□□ -1.21
VEGFA-223ENST00000523125 LRP2P98164 4655 aa7.52□□□□□ -1.21
VEGFA-223ENST00000523125 CARHSP1Q9Y2V2 147 aaKnown RBP7.51□□□□□ -1.21
VEGFA-223ENST00000523125 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
VEGFA-223ENST00000523125 SMIM1B2RUZ4 78 aa7.5□□□□□ -1.21
VEGFA-223ENST00000523125 COX19Q49B96 90 aa7.5□□□□□ -1.21
VEGFA-223ENST00000523125 LINC00469Q8N7U9 141 aa7.5□□□□□ -1.21
VEGFA-223ENST00000523125 MRPL18Q9H0U6 180 aaKnown RBP7.5□□□□□ -1.21
VEGFA-223ENST00000523125 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
VEGFA-223ENST00000523125 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
VEGFA-223ENST00000523125 LINC01549A6NIU2 74 aa7.49□□□□□ -1.21
VEGFA-223ENST00000523125 F8VRH5 84 aa7.49□□□□□ -1.21
VEGFA-223ENST00000523125 H0Y9J4 135 aa7.49□□□□□ -1.21
VEGFA-223ENST00000523125 FABP9Q0Z7S8 132 aa7.49□□□□□ -1.21
VEGFA-223ENST00000523125 RHEBQ15382 184 aa7.49□□□□□ -1.21
VEGFA-223ENST00000523125 DIRC1Q969H9 104 aa7.49□□□□□ -1.21
VEGFA-223ENST00000523125 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
VEGFA-223ENST00000523125 RPS10P5Q9NQ39 176 aa7.49□□□□□ -1.21
VEGFA-223ENST00000523125 A0A096LNJ9 63 aa7.47□□□□□ -1.21
VEGFA-223ENST00000523125 UBE2BP63146 152 aa7.47□□□□□ -1.21
VEGFA-223ENST00000523125 PMVKQ15126 192 aa7.47□□□□□ -1.21
VEGFA-223ENST00000523125 PDZD11Q5EBL8 140 aa7.47□□□□□ -1.21
VEGFA-223ENST00000523125 FA2HQ7L5A8 372 aa7.47□□□□□ -1.21
VEGFA-223ENST00000523125 URB1-AS1Q96HZ7 61 aa7.47□□□□□ -1.21
VEGFA-223ENST00000523125 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
VEGFA-223ENST00000523125 KRTAP1-4P0C5Y4 121 aa7.46□□□□□ -1.22
VEGFA-223ENST00000523125 CXCL5P42830 114 aa7.46□□□□□ -1.22
VEGFA-223ENST00000523125 PRR26Q8N8Z3 221 aa7.46□□□□□ -1.22
VEGFA-223ENST00000523125 COX7B2Q8TF08 81 aa7.46□□□□□ -1.22
VEGFA-223ENST00000523125 SMCO4Q9NRQ5 59 aa7.46□□□□□ -1.22
VEGFA-223ENST00000523125 SPINK8P0C7L1 97 aa7.45□□□□□ -1.22
VEGFA-223ENST00000523125 C18orf32Q8TCD1 76 aa7.45□□□□□ -1.22
VEGFA-223ENST00000523125 LINC00614P0C842 121 aa7.43□□□□□ -1.22
VEGFA-223ENST00000523125 TP73-AS1Q9UF72 201 aa7.43□□□□□ -1.22
VEGFA-223ENST00000523125 TRAPPC1Q9Y5R8 145 aa7.43□□□□□ -1.22
VEGFA-223ENST00000523125 IGLC3P0DOY3 106 aa7.42□□□□□ -1.22
VEGFA-223ENST00000523125 LBHQ53QV2 105 aaPredicted RBP7.42□□□□□ -1.22
VEGFA-223ENST00000523125 MRPL55Q7Z7F7 128 aaKnown RBP7.42□□□□□ -1.22
VEGFA-223ENST00000523125 RNF213Q63HN8 5207 aa7.41□□□□□ -1.22
VEGFA-223ENST00000523125 IGLV1-50A0A075B6I6 118 aa7.41□□□□□ -1.22
VEGFA-223ENST00000523125 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
VEGFA-223ENST00000523125 NUPR1O60356 82 aa7.41□□□□□ -1.22
VEGFA-223ENST00000523125 ZNF861PO60384 105 aa7.41□□□□□ -1.22
VEGFA-223ENST00000523125 APOC3P02656 99 aa7.41□□□□□ -1.22
VEGFA-223ENST00000523125 RAB5BP61020 215 aa7.41□□□□□ -1.22
VEGFA-223ENST00000523125 PMCHL1Q16048 86 aa7.41□□□□□ -1.22
VEGFA-223ENST00000523125 H3BRM9 83 aa7.4□□□□□ -1.22
VEGFA-223ENST00000523125 HBDP02042 147 aa7.4□□□□□ -1.22
VEGFA-223ENST00000523125 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
VEGFA-223ENST00000523125 LINC00167Q96N53 147 aa7.4□□□□□ -1.22
VEGFA-223ENST00000523125 IGLV5-37A0A075B6J1 123 aa7.39□□□□□ -1.23
VEGFA-223ENST00000523125 RPL37AP8A6NKH3 93 aa7.39□□□□□ -1.23
VEGFA-223ENST00000523125 NDUFA6P56556 154 aa7.39□□□□□ -1.23
VEGFA-223ENST00000523125 YPEL4Q96NS1 127 aa7.39□□□□□ -1.23
VEGFA-223ENST00000523125 SNAPINO95295 136 aa7.38□□□□□ -1.23
VEGFA-223ENST00000523125 SVBPQ8N300 66 aa7.38□□□□□ -1.23
VEGFA-223ENST00000523125 LPAP08519 4548 aa7.37□□□□□ -1.23
VEGFA-223ENST00000523125 C11orf86A6NJI1 115 aa7.37□□□□□ -1.23
VEGFA-223ENST00000523125 BCE1O60756 84 aa7.37□□□□□ -1.23
VEGFA-223ENST00000523125 ATP5LO75964 103 aa7.37□□□□□ -1.23
VEGFA-223ENST00000523125 GAGE10A6NGK3 116 aa7.36□□□□□ -1.23
VEGFA-223ENST00000523125 PFN2P35080 140 aa7.36□□□□□ -1.23
VEGFA-223ENST00000523125 BAGE3Q86Y29 109 aa7.36□□□□□ -1.23
VEGFA-223ENST00000523125 SCO1O75880 301 aa7.35□□□□□ -1.23
VEGFA-223ENST00000523125 NDUFA5Q16718 116 aa7.35□□□□□ -1.23
VEGFA-223ENST00000523125 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
VEGFA-223ENST00000523125 RPL13AP40429 203 aaKnown RBP7.34□□□□□ -1.23
VEGFA-223ENST00000523125 RPL28P46779 137 aaKnown RBP7.34□□□□□ -1.23
VEGFA-223ENST00000523125 NKAPP1Q8N9T2 125 aa7.34□□□□□ -1.23
VEGFA-223ENST00000523125 SND1-IT1Q9HBX3 110 aa7.34□□□□□ -1.23
VEGFA-223ENST00000523125 ERG28Q9UKR5 140 aa7.34□□□□□ -1.23
VEGFA-223ENST00000523125 VPREB1P12018 145 aa7.33□□□□□ -1.24
VEGFA-223ENST00000523125 COX17Q14061 63 aa7.33□□□□□ -1.24
VEGFA-223ENST00000523125 TMEM170BQ5T4T1 132 aa7.33□□□□□ -1.24
VEGFA-223ENST00000523125 Q8NDZ9 215 aa7.33□□□□□ -1.24
VEGFA-223ENST00000523125 ZNF625Q96I27 306 aaPredicted RBP7.33□□□□□ -1.24
VEGFA-223ENST00000523125 A0A087X002 238 aa7.32□□□□□ -1.24
VEGFA-223ENST00000523125 CHCHD1Q96BP2 118 aaKnown RBP7.32□□□□□ -1.24
VEGFA-223ENST00000523125 CHTOPQ9Y3Y2 248 aaKnown RBP7.32□□□□□ -1.24
VEGFA-223ENST00000523125 IGKV2-28A0A075B6P5 120 aa7.31□□□□□ -1.24
VEGFA-223ENST00000523125 IGKV2D-28P01615 120 aa7.31□□□□□ -1.24
VEGFA-223ENST00000523125 TRAV12-1A0A0B4J245 112 aa7.3□□□□□ -1.24
VEGFA-223ENST00000523125 TMEM223A0PJW6 202 aa7.3□□□□□ -1.24
VEGFA-223ENST00000523125 IFI27L1Q96BM0 104 aa7.3□□□□□ -1.24
VEGFA-223ENST00000523125 SFTA2Q6UW10 78 aa7.29□□□□□ -1.24
VEGFA-223ENST00000523125 CBLN2Q8IUK8 224 aa7.29□□□□□ -1.24
VEGFA-223ENST00000523125 ANAPC11Q9NYG5 84 aa7.29□□□□□ -1.24
VEGFA-223ENST00000523125 TMEM238C9JI98 176 aa7.28□□□□□ -1.24
VEGFA-223ENST00000523125 UBE2AP49459 152 aa7.28□□□□□ -1.24
VEGFA-223ENST00000523125 FAM19A2Q8N3H0 131 aa7.28□□□□□ -1.24
VEGFA-223ENST00000523125 TMEM126AQ9H061 195 aa7.28□□□□□ -1.24
VEGFA-223ENST00000523125 CRYGAP11844 174 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms