RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LAMTOR2Q9Y2Q5 125 aa9.14□□□□□ -0.95
MRPS28-209ENST00000522987 KIAA1644Q3SXP7 199 aa9.13□□□□□ -0.95
MRPS28-209ENST00000522987 NUPR1O60356 82 aa9.12□□□□□ -0.95
MRPS28-209ENST00000522987 LBHQ53QV2 105 aaPredicted RBP9.12□□□□□ -0.95
MRPS28-209ENST00000522987 MRPL55Q7Z7F7 128 aaKnown RBP9.12□□□□□ -0.95
MRPS28-209ENST00000522987 F8VRH5 84 aa9.11□□□□□ -0.95
MRPS28-209ENST00000522987 MT-ND4LP03901 98 aa9.11□□□□□ -0.95
MRPS28-209ENST00000522987 HERVK_113P63121 156 aa9.11□□□□□ -0.95
MRPS28-209ENST00000522987 CARHSP1Q9Y2V2 147 aaKnown RBP9.11□□□□□ -0.95
MRPS28-209ENST00000522987 RAB5BP61020 215 aa9.1□□□□□ -0.95
MRPS28-209ENST00000522987 FAM19A3Q7Z5A8 133 aa9.1□□□□□ -0.95
MRPS28-209ENST00000522987 ANAPC16Q96DE5 110 aa9.1□□□□□ -0.95
MRPS28-209ENST00000522987 LINC00167Q96N53 147 aa9.1□□□□□ -0.95
MRPS28-209ENST00000522987 BCE1O60756 84 aa9.09□□□□□ -0.95
MRPS28-209ENST00000522987 ADCYAP1P18509 176 aa9.09□□□□□ -0.95
MRPS28-209ENST00000522987 RPL28P46779 137 aaKnown RBP9.09□□□□□ -0.95
MRPS28-209ENST00000522987 TYMSOSQ8TAI1 123 aa9.09□□□□□ -0.95
MRPS28-209ENST00000522987 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
MRPS28-209ENST00000522987 SMIM1B2RUZ4 78 aa9.08□□□□□ -0.96
MRPS28-209ENST00000522987 SCO1O75880 301 aa9.08□□□□□ -0.96
MRPS28-209ENST00000522987 COX7B2Q8TF08 81 aa9.08□□□□□ -0.96
MRPS28-209ENST00000522987 SCGB3A1Q96QR1 104 aa9.08□□□□□ -0.96
MRPS28-209ENST00000522987 RETNLBQ9BQ08 111 aa9.08□□□□□ -0.96
MRPS28-209ENST00000522987 SPINK8P0C7L1 97 aa9.07□□□□□ -0.96
MRPS28-209ENST00000522987 SEC11AP67812 179 aa9.07□□□□□ -0.96
MRPS28-209ENST00000522987 PNRC1Q12796 327 aaPredicted RBP9.07□□□□□ -0.96
MRPS28-209ENST00000522987 TOMM6Q96B49 74 aa9.07□□□□□ -0.96
MRPS28-209ENST00000522987 TIMM17AQ99595 171 aa9.07□□□□□ -0.96
MRPS28-209ENST00000522987 MUC2Q02817 5179 aa9.06□□□□□ -0.96
MRPS28-209ENST00000522987 CRYGAP11844 174 aa9.06□□□□□ -0.96
MRPS28-209ENST00000522987 PAPPA-AS1Q5QFB9 102 aa9.06□□□□□ -0.96
MRPS28-209ENST00000522987 TP73-AS1Q9UF72 201 aa9.06□□□□□ -0.96
MRPS28-209ENST00000522987 K7EMI3 77 aa9.05□□□□□ -0.96
MRPS28-209ENST00000522987 NPSP0C0P6 89 aa9.05□□□□□ -0.96
MRPS28-209ENST00000522987 CXCL5P42830 114 aa9.05□□□□□ -0.96
MRPS28-209ENST00000522987 UBE2AP49459 152 aa9.04□□□□□ -0.96
MRPS28-209ENST00000522987 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
MRPS28-209ENST00000522987 ERASQ7Z444 233 aa9.04□□□□□ -0.96
MRPS28-209ENST00000522987 IGKV2-28A0A075B6P5 120 aa9.03□□□□□ -0.96
MRPS28-209ENST00000522987 IGKV2D-28P01615 120 aa9.03□□□□□ -0.96
MRPS28-209ENST00000522987 PDZD11Q5EBL8 140 aa9.03□□□□□ -0.96
MRPS28-209ENST00000522987 NKAPP1Q8N9T2 125 aa9.03□□□□□ -0.96
MRPS28-209ENST00000522987 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.97
MRPS28-209ENST00000522987 G0S2P27469 103 aa9.01□□□□□ -0.97
MRPS28-209ENST00000522987 PFN2P35080 140 aa9.01□□□□□ -0.97
MRPS28-209ENST00000522987 PRLHP81277 87 aa9.01□□□□□ -0.97
MRPS28-209ENST00000522987 RAB14P61106 215 aa9□□□□□ -0.97
MRPS28-209ENST00000522987 CST9LQ9H4G1 147 aa9□□□□□ -0.97
MRPS28-209ENST00000522987 IGLV5-45A0A087WSX0 123 aa8.99□□□□□ -0.97
MRPS28-209ENST00000522987 KRTAP13-1Q8IUC0 172 aa8.99□□□□□ -0.97
MRPS28-209ENST00000522987 A0A0U1RQV1 116 aa8.98□□□□□ -0.97
MRPS28-209ENST00000522987 IGLV5-37A0A075B6J1 123 aa8.97□□□□□ -0.97
MRPS28-209ENST00000522987 TMEM238C9JI98 176 aa8.97□□□□□ -0.97
MRPS28-209ENST00000522987 NDUFA6P56556 154 aa8.97□□□□□ -0.97
MRPS28-209ENST00000522987 PMVKQ15126 192 aa8.97□□□□□ -0.97
MRPS28-209ENST00000522987 FAM19A1Q7Z5A9 133 aa8.97□□□□□ -0.97
MRPS28-209ENST00000522987 LINC00304Q8N9R0 145 aa8.97□□□□□ -0.97
MRPS28-209ENST00000522987 ATP5LO75964 103 aa8.96□□□□□ -0.98
MRPS28-209ENST00000522987 ZNF625Q96I27 306 aaPredicted RBP8.96□□□□□ -0.98
MRPS28-209ENST00000522987 KRTAP9-2Q9BYQ4 174 aa8.96□□□□□ -0.98
MRPS28-209ENST00000522987 FA2HQ7L5A8 372 aa8.95□□□□□ -0.98
MRPS28-209ENST00000522987 SMCO4Q9NRQ5 59 aa8.95□□□□□ -0.98
MRPS28-209ENST00000522987 IGKV2D-26A0A0A0MRZ7 120 aa8.94□□□□□ -0.98
MRPS28-209ENST00000522987 H3BRM9 83 aa8.94□□□□□ -0.98
MRPS28-209ENST00000522987 Q8NDZ9 215 aa8.94□□□□□ -0.98
MRPS28-209ENST00000522987 VPREB1P12018 145 aa8.93□□□□□ -0.98
MRPS28-209ENST00000522987 C3orf22Q8N5N4 141 aa8.93□□□□□ -0.98
MRPS28-209ENST00000522987 TMEM126AQ9H061 195 aa8.93□□□□□ -0.98
MRPS28-209ENST00000522987 CDIP1Q9H305 208 aa8.93□□□□□ -0.98
MRPS28-209ENST00000522987 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
MRPS28-209ENST00000522987 LINC01546A6NGU7 62 aa8.92□□□□□ -0.98
MRPS28-209ENST00000522987 ZNF22P17026 224 aaPredicted RBP8.92□□□□□ -0.98
MRPS28-209ENST00000522987 FABP9Q0Z7S8 132 aa8.92□□□□□ -0.98
MRPS28-209ENST00000522987 FAM229BQ4G0N7 80 aa8.92□□□□□ -0.98
MRPS28-209ENST00000522987 MRPL18Q9H0U6 180 aaKnown RBP8.92□□□□□ -0.98
MRPS28-209ENST00000522987 ERG28Q9UKR5 140 aa8.92□□□□□ -0.98
MRPS28-209ENST00000522987 IGLV7-46A0A075B6I9 117 aa8.91□□□□□ -0.98
MRPS28-209ENST00000522987 S100PP25815 95 aa8.91□□□□□ -0.98
MRPS28-209ENST00000522987 PMCHL1Q16048 86 aa8.91□□□□□ -0.98
MRPS28-209ENST00000522987 GNB1LQ9BYB4 327 aa8.91□□□□□ -0.98
MRPS28-209ENST00000522987 TRAV9-1A0A075B6T8 112 aa8.9□□□□□ -0.98
MRPS28-209ENST00000522987 TMEM218A2RU14 115 aa8.9□□□□□ -0.98
MRPS28-209ENST00000522987 M0R378 163 aa8.9□□□□□ -0.98
MRPS28-209ENST00000522987 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
MRPS28-209ENST00000522987 CLLU1Q5K131 121 aa8.9□□□□□ -0.98
MRPS28-209ENST00000522987 FAT4Q6V0I7 4981 aa8.9□□□□□ -0.99
MRPS28-209ENST00000522987 IGLV5-39A0A0G2JS06 123 aa8.89□□□□□ -0.99
MRPS28-209ENST00000522987 A0A0U1RRA0 63 aa8.89□□□□□ -0.99
MRPS28-209ENST00000522987 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
MRPS28-209ENST00000522987 HIGD2AQ9BW72 106 aa8.89□□□□□ -0.99
MRPS28-209ENST00000522987 A0A096LNJ9 63 aa8.88□□□□□ -0.99
MRPS28-209ENST00000522987 LINC01549A6NIU2 74 aa8.88□□□□□ -0.99
MRPS28-209ENST00000522987 CBLN2Q8IUK8 224 aa8.88□□□□□ -0.99
MRPS28-209ENST00000522987 PLEKHB2Q96CS7 222 aa8.87□□□□□ -0.99
MRPS28-209ENST00000522987 URB1-AS1Q96HZ7 61 aa8.87□□□□□ -0.99
MRPS28-209ENST00000522987 C11orf86A6NJI1 115 aa8.86□□□□□ -0.99
MRPS28-209ENST00000522987 RPL24P83731 157 aaKnown RBP8.86□□□□□ -0.99
MRPS28-209ENST00000522987 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
MRPS28-209ENST00000522987 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
MRPS28-209ENST00000522987 MUC17Q685J3 4493 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms