RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 LINC00242Q5T6M2 205 aa9.04□□□□□ -0.96
TRAPPC9-213ENST00000522504 LCE2AQ5TA79 106 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC9-213ENST00000522504 ZNF861PO60384 105 aa9.03□□□□□ -0.96
TRAPPC9-213ENST00000522504 TRBV30A0A0K0K1B3 111 aa9.02□□□□□ -0.97
TRAPPC9-213ENST00000522504 TRGC2P03986 189 aa9.02□□□□□ -0.97
TRAPPC9-213ENST00000522504 LAMTOR2Q9Y2Q5 125 aa9.02□□□□□ -0.97
TRAPPC9-213ENST00000522504 IGLV4-3A0A075B6K6 122 aa9.01□□□□□ -0.97
TRAPPC9-213ENST00000522504 A0A087X002 238 aa9.01□□□□□ -0.97
TRAPPC9-213ENST00000522504 ZC2HC1BQ5TFG8 222 aa9.01□□□□□ -0.97
TRAPPC9-213ENST00000522504 ALKBH7Q9BT30 221 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC9-213ENST00000522504 A0A0U1RQV1 116 aa9□□□□□ -0.97
TRAPPC9-213ENST00000522504 LINC00469Q8N7U9 141 aa9□□□□□ -0.97
TRAPPC9-213ENST00000522504 MAP1LC3AQ9H492 121 aa9□□□□□ -0.97
TRAPPC9-213ENST00000522504 LOC389332A0A1B0GUA5 103 aa8.99□□□□□ -0.97
TRAPPC9-213ENST00000522504 PACRGQ96M98 296 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC9-213ENST00000522504 PYGO1Q9Y3Y4 419 aa8.99□□□□□ -0.97
TRAPPC9-213ENST00000522504 C22orf24Q9Y442 160 aa8.99□□□□□ -0.97
TRAPPC9-213ENST00000522504 IFI27P40305 119 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC9-213ENST00000522504 XAGE1AQ9HD64 81 aa8.98□□□□□ -0.97
TRAPPC9-213ENST00000522504 LINC00173Q6ZV60 143 aa8.97□□□□□ -0.97
TRAPPC9-213ENST00000522504 TMEM141Q96I45 108 aa8.97□□□□□ -0.97
TRAPPC9-213ENST00000522504 PRSS47A8MTI9 375 aa8.96□□□□□ -0.98
TRAPPC9-213ENST00000522504 C18orf32Q8TCD1 76 aa8.96□□□□□ -0.98
TRAPPC9-213ENST00000522504 NUPR1O60356 82 aa8.95□□□□□ -0.98
TRAPPC9-213ENST00000522504 LINC01561Q8N1V8 128 aa8.95□□□□□ -0.98
TRAPPC9-213ENST00000522504 Q8N8P6 123 aa8.95□□□□□ -0.98
TRAPPC9-213ENST00000522504 ANAPC11Q9NYG5 84 aa8.95□□□□□ -0.98
TRAPPC9-213ENST00000522504 TEX43Q6ZNM6 134 aa8.94□□□□□ -0.98
TRAPPC9-213ENST00000522504 NXT2Q9NPJ8 142 aaKnown RBP8.94□□□□□ -0.98
TRAPPC9-213ENST00000522504 TOMM7Q9P0U1 55 aa8.94□□□□□ -0.98
TRAPPC9-213ENST00000522504 FA2HQ7L5A8 372 aa8.93□□□□□ -0.98
TRAPPC9-213ENST00000522504 AMELXQ99217 191 aa8.93□□□□□ -0.98
TRAPPC9-213ENST00000522504 KRTAP9-6A0A140TA67 174 aa8.92□□□□□ -0.98
TRAPPC9-213ENST00000522504 CKS1BP61024 79 aa8.92□□□□□ -0.98
TRAPPC9-213ENST00000522504 LBHQ53QV2 105 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC9-213ENST00000522504 Q6ZN92 141 aa8.92□□□□□ -0.98
TRAPPC9-213ENST00000522504 TYMSOSQ8TAI1 123 aa8.92□□□□□ -0.98
TRAPPC9-213ENST00000522504 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
TRAPPC9-213ENST00000522504 BCE1O60756 84 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST1H2BKO60814 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST1H2BJP06899 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 PRSS2P07478 247 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 CRYGAP11844 174 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST1H2BOP23527 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST1H2BBP33778 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST1H2BDP58876 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST1H2BCP62807 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST2H2BEQ16778 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 C6orf226Q5I0X4 101 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 MRPL55Q7Z7F7 128 aaKnown RBP8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 BAGE3Q86Y29 109 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST1H2BHQ93079 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST1H2BNQ99877 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 HIST1H2BMQ99879 126 aa8.91□□□□□ -0.98
TRAPPC9-213ENST00000522504 RPL28P46779 137 aaKnown RBP8.9□□□□□ -0.98
TRAPPC9-213ENST00000522504 RAB5BP61020 215 aa8.9□□□□□ -0.98
TRAPPC9-213ENST00000522504 ORMDL2Q53FV1 153 aa8.9□□□□□ -0.98
TRAPPC9-213ENST00000522504 C2orf66Q6UXQ4 117 aa8.9□□□□□ -0.98
TRAPPC9-213ENST00000522504 Q8IZM0 81 aa8.9□□□□□ -0.98
TRAPPC9-213ENST00000522504 URB1-AS1Q96HZ7 61 aa8.9□□□□□ -0.98
TRAPPC9-213ENST00000522504 C2orf88Q9BSF0 95 aa8.9□□□□□ -0.98
TRAPPC9-213ENST00000522504 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.98
TRAPPC9-213ENST00000522504 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
TRAPPC9-213ENST00000522504 K7EMI3 77 aa8.89□□□□□ -0.99
TRAPPC9-213ENST00000522504 LINC00614P0C842 121 aa8.89□□□□□ -0.99
TRAPPC9-213ENST00000522504 VCX2Q9H322 139 aa8.89□□□□□ -0.99
TRAPPC9-213ENST00000522504 LINC01546A6NGU7 62 aa8.88□□□□□ -0.99
TRAPPC9-213ENST00000522504 IGIPA6NJ69 53 aa8.88□□□□□ -0.99
TRAPPC9-213ENST00000522504 FAM19A3Q7Z5A8 133 aa8.88□□□□□ -0.99
TRAPPC9-213ENST00000522504 LINC00167Q96N53 147 aa8.88□□□□□ -0.99
TRAPPC9-213ENST00000522504 CDKN2A-AS1Q9UH64 79 aa8.88□□□□□ -0.99
TRAPPC9-213ENST00000522504 CYSLTR1Q9Y271 337 aa8.88□□□□□ -0.99
TRAPPC9-213ENST00000522504 F8VRH5 84 aa8.87□□□□□ -0.99
TRAPPC9-213ENST00000522504 SERF1AO75920 110 aa8.87□□□□□ -0.99
TRAPPC9-213ENST00000522504 KRTAP13-1Q8IUC0 172 aa8.87□□□□□ -0.99
TRAPPC9-213ENST00000522504 CHCHD1Q96BP2 118 aaKnown RBP8.87□□□□□ -0.99
TRAPPC9-213ENST00000522504 GAGE10A6NGK3 116 aa8.86□□□□□ -0.99
TRAPPC9-213ENST00000522504 NDUFA6P56556 154 aa8.86□□□□□ -0.99
TRAPPC9-213ENST00000522504 HSBP1O75506 76 aa8.85□□□□□ -0.99
TRAPPC9-213ENST00000522504 LINC00310P59036 64 aa8.85□□□□□ -0.99
TRAPPC9-213ENST00000522504 PMCHL1Q16048 86 aa8.85□□□□□ -0.99
TRAPPC9-213ENST00000522504 G0S2P27469 103 aa8.84□□□□□ -0.99
TRAPPC9-213ENST00000522504 HBDP02042 147 aa8.83□□□□□ -1
TRAPPC9-213ENST00000522504 A0A096LNJ9 63 aa8.82□□□□□ -1
TRAPPC9-213ENST00000522504 S100A6P06703 90 aa8.82□□□□□ -1
TRAPPC9-213ENST00000522504 NPSP0C0P6 89 aa8.82□□□□□ -1
TRAPPC9-213ENST00000522504 HERVK_113P63121 156 aa8.82□□□□□ -1
TRAPPC9-213ENST00000522504 FAM19A2Q8N3H0 131 aa8.82□□□□□ -1
TRAPPC9-213ENST00000522504 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
TRAPPC9-213ENST00000522504 TOMM6Q96B49 74 aa8.82□□□□□ -1
TRAPPC9-213ENST00000522504 SMIM1B2RUZ4 78 aa8.81□□□□□ -1
TRAPPC9-213ENST00000522504 TPRXLQ17RH7 258 aa8.81□□□□□ -1
TRAPPC9-213ENST00000522504 COA6Q5JTJ3 125 aaKnown RBP8.81□□□□□ -1
TRAPPC9-213ENST00000522504 CDIP1Q9H305 208 aa8.81□□□□□ -1
TRAPPC9-213ENST00000522504 GEMIN7Q9H840 131 aaKnown RBP8.81□□□□□ -1
TRAPPC9-213ENST00000522504 TMA7Q9Y2S6 64 aaKnown RBP8.81□□□□□ -1
TRAPPC9-213ENST00000522504 IGLV7-46A0A075B6I9 117 aa8.8□□□□□ -1
TRAPPC9-213ENST00000522504 IGLV5-37A0A075B6J1 123 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms