RNA–Protein interactions for RNA: ENST00000520963.2

IGHV7-40-201, Transcript of immunoglobulin heavy variable 7-40 (pseudogene), humanhuman

BASIC

Gene IGHV7-40, Length 296 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV7-40-201ENST00000520963 IGHV3-64A0A075B6Q5 118 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 LOC107984156A0A0G2JMH3 177 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 TRBV30A0A0K0K1B3 111 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 PSMB2P49721 201 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 RNASE13Q5GAN3 156 aaKnown RBP5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 LINC00242Q5T6M2 205 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 DGAT2L7PQ6IED9 249 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 WFDC10BQ8IUB3 73 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 ARL17AQ8IVW1 177 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 TMEM101Q96IK0 257 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 GEMIN7Q9H840 131 aaKnown RBP5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 PRR34Q9NV39 138 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 CDKN2A-AS1Q9UH64 79 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 ERG28Q9UKR5 140 aa5.4□□□□□ -1.54
IGHV7-40-201ENST00000520963 GAGE12HA6NDE8 117 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 TMEM262E9PQX1 116 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 SPINK8P0C7L1 97 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 SCGB1A1P11684 91 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 HERVK_113P63121 156 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 COX6A2Q02221 97 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 FOXI1Q12951 378 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 CASC10Q5T4H9 136 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 TEN1Q86WV5 123 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 PPDPFLQ8WWR9 84 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 CARD19Q96LW7 228 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 DNAH7Q8WXX0 4024 aa5.39□□□□□ -1.55
IGHV7-40-201ENST00000520963 MTURNQ8N3F0 131 aa5.38□□□□□ -1.55
IGHV7-40-201ENST00000520963 SMIM1B2RUZ4 78 aa5.37□□□□□ -1.55
IGHV7-40-201ENST00000520963 PLECQ15149 4684 aaKnown RBP5.37□□□□□ -1.55
IGHV7-40-201ENST00000520963 Q8N3U1 123 aa5.37□□□□□ -1.55
IGHV7-40-201ENST00000520963 ZNF625Q96I27 306 aaPredicted RBP5.37□□□□□ -1.55
IGHV7-40-201ENST00000520963 SIGMAR1Q99720 223 aa5.37□□□□□ -1.55
IGHV7-40-201ENST00000520963 Q9H8V8 135 aa5.37□□□□□ -1.55
IGHV7-40-201ENST00000520963 VPS13DQ5THJ4 4388 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 TRAV8-4A0A0B4J246 113 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 LINC00959A0A1B0GUT2 108 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 IBA57-AS1B1ANH7 110 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 TRIAP1O43715 76 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 REG3AQ06141 175 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 LINC01620Q4KN68 170 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 SFTA2Q6UW10 78 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 LINC00269Q8N2A0 174 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 CDIP1Q9H305 208 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 STARD9Q9P2P6 4700 aa5.36□□□□□ -1.55
IGHV7-40-201ENST00000520963 SLC25A20O43772 301 aa5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 ANGP03950 147 aaKnown RBP5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 SCGB1C2P0DMR2 95 aa5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 HERV-K104P63124 156 aa5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 ATXN8Q156A1 80 aa5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 ENHOQ6UWT2 76 aa5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 UBE2DNLQ8IWF7 75 aa5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 ANKRD29Q8N6D5 301 aa5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 LINC00308Q8TCZ7 52 aa5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 KLK12Q9UKR0 248 aa5.35□□□□□ -1.55
IGHV7-40-201ENST00000520963 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.55
IGHV7-40-201ENST00000520963 TRBV10-2A0A0K0K1G8 114 aa5.34□□□□□ -1.55
IGHV7-40-201ENST00000520963 C9JAW5 83 aa5.34□□□□□ -1.55
IGHV7-40-201ENST00000520963 PRSS2P07478 247 aa5.34□□□□□ -1.55
IGHV7-40-201ENST00000520963 RPL13AP40429 203 aaKnown RBP5.34□□□□□ -1.55
IGHV7-40-201ENST00000520963 CIRBPQ14011 172 aaKnown RBP5.34□□□□□ -1.55
IGHV7-40-201ENST00000520963 SS18Q15532 418 aa5.34□□□□□ -1.55
IGHV7-40-201ENST00000520963 LINC01561Q8N1V8 128 aa5.34□□□□□ -1.55
IGHV7-40-201ENST00000520963 TRAV13-1A0A0B4J241 112 aa5.33□□□□□ -1.56
IGHV7-40-201ENST00000520963 TTC32Q5I0X7 151 aa5.33□□□□□ -1.56
IGHV7-40-201ENST00000520963 KRTAP26-1Q6PEX3 210 aa5.33□□□□□ -1.56
IGHV7-40-201ENST00000520963 CD164L2Q6UWJ8 174 aa5.33□□□□□ -1.56
IGHV7-40-201ENST00000520963 SOSTDC1Q6X4U4 206 aa5.33□□□□□ -1.56
IGHV7-40-201ENST00000520963 COPS9Q8WXC6 57 aa5.33□□□□□ -1.56
IGHV7-40-201ENST00000520963 LINC00476Q8WZB0 136 aa5.33□□□□□ -1.56
IGHV7-40-201ENST00000520963 A0A087WZ39 114 aa5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 NBDYA0A0U1RRE5 68 aa5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 H3BT86 120 aa5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 LST1O00453 97 aa5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 CRPP02741 224 aa5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 CHCHD10Q8WYQ3 142 aaPredicted RBP5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 UBE2WQ96B02 151 aa5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 KRTAP1-5Q9BYS1 174 aa5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 CSMD3Q7Z407 3707 aa5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 DNAH1Q9P2D7 4330 aa5.32□□□□□ -1.56
IGHV7-40-201ENST00000520963 TGP01266 2768 aa5.31□□□□□ -1.56
IGHV7-40-201ENST00000520963 H7C2G1 150 aa5.31□□□□□ -1.56
IGHV7-40-201ENST00000520963 COX6CP09669 75 aa5.31□□□□□ -1.56
IGHV7-40-201ENST00000520963 Q1RN00 199 aa5.31□□□□□ -1.56
IGHV7-40-201ENST00000520963 Q6ZR54 194 aa5.31□□□□□ -1.56
IGHV7-40-201ENST00000520963 RMI2Q96E14 147 aa5.31□□□□□ -1.56
IGHV7-40-201ENST00000520963 CLPSL2Q6UWE3 100 aa5.3□□□□□ -1.56
IGHV7-40-201ENST00000520963 IGKV3OR2-268A0A0C4DH90 116 aa5.29□□□□□ -1.56
IGHV7-40-201ENST00000520963 COX7A2LO14548 114 aa5.29□□□□□ -1.56
IGHV7-40-201ENST00000520963 XCL1P47992 114 aa5.29□□□□□ -1.56
IGHV7-40-201ENST00000520963 DAND5Q8N907 189 aa5.29□□□□□ -1.56
IGHV7-40-201ENST00000520963 COX7B2Q8TF08 81 aa5.29□□□□□ -1.56
IGHV7-40-201ENST00000520963 NTN5Q8WTR8 489 aaPredicted RBP5.29□□□□□ -1.56
IGHV7-40-201ENST00000520963 C1orf43Q9BWL3 253 aa5.29□□□□□ -1.56
IGHV7-40-201ENST00000520963 ALMS1Q8TCU4 4167 aa5.29□□□□□ -1.56
IGHV7-40-201ENST00000520963 IGLV10-54A0A075B6I4 117 aa5.28□□□□□ -1.56
IGHV7-40-201ENST00000520963 XGP55808 180 aa5.28□□□□□ -1.56
IGHV7-40-201ENST00000520963 NPC2P61916 151 aa5.28□□□□□ -1.56
IGHV7-40-201ENST00000520963 CLEC2BQ92478 149 aa5.28□□□□□ -1.56
IGHV7-40-201ENST00000520963 DNAH6Q9C0G6 4158 aa5.27□□□□□ -1.57
IGHV7-40-201ENST00000520963 IGKV2D-24A0A075B6R9 120 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms