RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 TMEM218A2RU14 115 aa9.84□□□□□ -0.83
IGHV3-42-201ENST00000520410 PRR26Q8N8Z3 221 aa9.84□□□□□ -0.83
IGHV3-42-201ENST00000520410 XAGE1AQ9HD64 81 aa9.84□□□□□ -0.83
IGHV3-42-201ENST00000520410 TRAV9-1A0A075B6T8 112 aa9.83□□□□□ -0.84
IGHV3-42-201ENST00000520410 H0Y9J4 135 aa9.83□□□□□ -0.84
IGHV3-42-201ENST00000520410 FA2HQ7L5A8 372 aa9.83□□□□□ -0.84
IGHV3-42-201ENST00000520410 ERASQ7Z444 233 aa9.82□□□□□ -0.84
IGHV3-42-201ENST00000520410 F8VRH5 84 aa9.81□□□□□ -0.84
IGHV3-42-201ENST00000520410 COMMD7Q86VX2 200 aa9.81□□□□□ -0.84
IGHV3-42-201ENST00000520410 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
IGHV3-42-201ENST00000520410 CXCL5P42830 114 aa9.8□□□□□ -0.84
IGHV3-42-201ENST00000520410 FABP9Q0Z7S8 132 aa9.8□□□□□ -0.84
IGHV3-42-201ENST00000520410 FAM19A3Q7Z5A8 133 aa9.8□□□□□ -0.84
IGHV3-42-201ENST00000520410 SEC11CQ9BY50 192 aa9.8□□□□□ -0.84
IGHV3-42-201ENST00000520410 UBR4Q5T4S7 5183 aa9.8□□□□□ -0.84
IGHV3-42-201ENST00000520410 SPINK8P0C7L1 97 aa9.79□□□□□ -0.84
IGHV3-42-201ENST00000520410 NDUFA6P56556 154 aa9.79□□□□□ -0.84
IGHV3-42-201ENST00000520410 LBHQ53QV2 105 aaPredicted RBP9.79□□□□□ -0.84
IGHV3-42-201ENST00000520410 COX7B2Q8TF08 81 aa9.79□□□□□ -0.84
IGHV3-42-201ENST00000520410 GNB1LQ9BYB4 327 aa9.79□□□□□ -0.84
IGHV3-42-201ENST00000520410 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
IGHV3-42-201ENST00000520410 RPS10P5Q9NQ39 176 aa9.79□□□□□ -0.84
IGHV3-42-201ENST00000520410 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
IGHV3-42-201ENST00000520410 RAB5BP61020 215 aa9.78□□□□□ -0.84
IGHV3-42-201ENST00000520410 TNXBP22105 4242 aa9.78□□□□□ -0.84
IGHV3-42-201ENST00000520410 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
IGHV3-42-201ENST00000520410 LINC01549A6NIU2 74 aa9.77□□□□□ -0.85
IGHV3-42-201ENST00000520410 SMIM1B2RUZ4 78 aa9.77□□□□□ -0.85
IGHV3-42-201ENST00000520410 IFITM2Q01629 132 aa9.77□□□□□ -0.85
IGHV3-42-201ENST00000520410 COX19Q49B96 90 aa9.77□□□□□ -0.85
IGHV3-42-201ENST00000520410 PDZD11Q5EBL8 140 aa9.76□□□□□ -0.85
IGHV3-42-201ENST00000520410 H3BRM9 83 aa9.75□□□□□ -0.85
IGHV3-42-201ENST00000520410 NUPR1O60356 82 aa9.75□□□□□ -0.85
IGHV3-42-201ENST00000520410 PMVKQ15126 192 aa9.75□□□□□ -0.85
IGHV3-42-201ENST00000520410 MRPL55Q7Z7F7 128 aaKnown RBP9.75□□□□□ -0.85
IGHV3-42-201ENST00000520410 CST9LQ9H4G1 147 aa9.75□□□□□ -0.85
IGHV3-42-201ENST00000520410 IGLV1-50A0A075B6I6 118 aa9.74□□□□□ -0.85
IGHV3-42-201ENST00000520410 GAGE10A6NGK3 116 aa9.74□□□□□ -0.85
IGHV3-42-201ENST00000520410 RPL37AP8A6NKH3 93 aa9.73□□□□□ -0.85
IGHV3-42-201ENST00000520410 RHEBQ15382 184 aa9.73□□□□□ -0.85
IGHV3-42-201ENST00000520410 NKAPP1Q8N9T2 125 aa9.73□□□□□ -0.85
IGHV3-42-201ENST00000520410 ZNF861PO60384 105 aa9.72□□□□□ -0.85
IGHV3-42-201ENST00000520410 ATP5LO75964 103 aa9.72□□□□□ -0.85
IGHV3-42-201ENST00000520410 RPL13AP40429 203 aaKnown RBP9.72□□□□□ -0.85
IGHV3-42-201ENST00000520410 TRAPPC1Q9Y5R8 145 aa9.71□□□□□ -0.86
IGHV3-42-201ENST00000520410 IGLV5-45A0A087WSX0 123 aa9.7□□□□□ -0.86
IGHV3-42-201ENST00000520410 PFN2P35080 140 aa9.7□□□□□ -0.86
IGHV3-42-201ENST00000520410 RPL28P46779 137 aaKnown RBP9.7□□□□□ -0.86
IGHV3-42-201ENST00000520410 LINC01546A6NGU7 62 aa9.69□□□□□ -0.86
IGHV3-42-201ENST00000520410 KRTAP1-4P0C5Y4 121 aa9.69□□□□□ -0.86
IGHV3-42-201ENST00000520410 PMCHL1Q16048 86 aa9.69□□□□□ -0.86
IGHV3-42-201ENST00000520410 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
IGHV3-42-201ENST00000520410 TP73-AS1Q9UF72 201 aa9.69□□□□□ -0.86
IGHV3-42-201ENST00000520410 BCE1O60756 84 aa9.68□□□□□ -0.86
IGHV3-42-201ENST00000520410 UBE2AP49459 152 aa9.68□□□□□ -0.86
IGHV3-42-201ENST00000520410 PRR4Q16378 134 aa9.68□□□□□ -0.86
IGHV3-42-201ENST00000520410 HBDP02042 147 aa9.67□□□□□ -0.86
IGHV3-42-201ENST00000520410 CARHSP1Q9Y2V2 147 aaKnown RBP9.67□□□□□ -0.86
IGHV3-42-201ENST00000520410 APOC3P02656 99 aa9.66□□□□□ -0.86
IGHV3-42-201ENST00000520410 LINC00614P0C842 121 aa9.66□□□□□ -0.86
IGHV3-42-201ENST00000520410 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
IGHV3-42-201ENST00000520410 NDUFA5Q16718 116 aa9.66□□□□□ -0.86
IGHV3-42-201ENST00000520410 TMEM170BQ5T4T1 132 aa9.66□□□□□ -0.86
IGHV3-42-201ENST00000520410 C18orf32Q8TCD1 76 aa9.66□□□□□ -0.86
IGHV3-42-201ENST00000520410 ZNF625Q96I27 306 aaPredicted RBP9.66□□□□□ -0.86
IGHV3-42-201ENST00000520410 IGKV2-28A0A075B6P5 120 aa9.65□□□□□ -0.86
IGHV3-42-201ENST00000520410 IGKV2D-28P01615 120 aa9.65□□□□□ -0.86
IGHV3-42-201ENST00000520410 SCO1O75880 301 aa9.64□□□□□ -0.87
IGHV3-42-201ENST00000520410 TSPAN13O95857 204 aa9.64□□□□□ -0.87
IGHV3-42-201ENST00000520410 ZNF22P17026 224 aaPredicted RBP9.64□□□□□ -0.87
IGHV3-42-201ENST00000520410 C10orf91Q5T1B1 145 aa9.64□□□□□ -0.87
IGHV3-42-201ENST00000520410 BAGE3Q86Y29 109 aa9.64□□□□□ -0.87
IGHV3-42-201ENST00000520410 ERG28Q9UKR5 140 aa9.63□□□□□ -0.87
IGHV3-42-201ENST00000520410 A0A096LNJ9 63 aa9.62□□□□□ -0.87
IGHV3-42-201ENST00000520410 SNAPINO95295 136 aa9.62□□□□□ -0.87
IGHV3-42-201ENST00000520410 TYMSOSQ8TAI1 123 aa9.62□□□□□ -0.87
IGHV3-42-201ENST00000520410 LRP2P98164 4655 aa9.61□□□□□ -0.87
IGHV3-42-201ENST00000520410 URB1-AS1Q96HZ7 61 aa9.61□□□□□ -0.87
IGHV3-42-201ENST00000520410 CRYGAP11844 174 aa9.6□□□□□ -0.87
IGHV3-42-201ENST00000520410 FAM19A1Q7Z5A9 133 aa9.6□□□□□ -0.87
IGHV3-42-201ENST00000520410 SVBPQ8N300 66 aa9.6□□□□□ -0.87
IGHV3-42-201ENST00000520410 CHTOPQ9Y3Y2 248 aaKnown RBP9.6□□□□□ -0.87
IGHV3-42-201ENST00000520410 IGLV5-37A0A075B6J1 123 aa9.59□□□□□ -0.87
IGHV3-42-201ENST00000520410 IGLV5-39A0A0G2JS06 123 aa9.59□□□□□ -0.87
IGHV3-42-201ENST00000520410 C11orf86A6NJI1 115 aa9.59□□□□□ -0.87
IGHV3-42-201ENST00000520410 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
IGHV3-42-201ENST00000520410 SND1-IT1Q9HBX3 110 aa9.59□□□□□ -0.87
IGHV3-42-201ENST00000520410 ANAPC11Q9NYG5 84 aa9.59□□□□□ -0.87
IGHV3-42-201ENST00000520410 A0A087X002 238 aa9.58□□□□□ -0.88
IGHV3-42-201ENST00000520410 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
IGHV3-42-201ENST00000520410 PRLHP81277 87 aa9.58□□□□□ -0.88
IGHV3-42-201ENST00000520410 ATP6V1G1O75348 118 aa9.57□□□□□ -0.88
IGHV3-42-201ENST00000520410 LINC00158P58513 81 aa9.57□□□□□ -0.88
IGHV3-42-201ENST00000520410 TMEM238C9JI98 176 aa9.55□□□□□ -0.88
IGHV3-42-201ENST00000520410 VPREB1P12018 145 aa9.55□□□□□ -0.88
IGHV3-42-201ENST00000520410 COX17Q14061 63 aa9.55□□□□□ -0.88
IGHV3-42-201ENST00000520410 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
IGHV3-42-201ENST00000520410 H0Y8G0 127 aa9.54□□□□□ -0.88
IGHV3-42-201ENST00000520410 MEIG1Q5JSS6 88 aa9.54□□□□□ -0.88
IGHV3-42-201ENST00000520410 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms