RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 PRM2P04554 102 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 ATXN8Q156A1 80 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 LINC01620Q4KN68 170 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 LELP1Q5T871 98 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 C14orf178Q8N769 122 aaPredicted RBP3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 KIR2DL4Q99706 377 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 TRAV8-3A0A0A6YYJ7 113 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 TRAV8-4A0A0B4J246 113 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 TRBV6-5A0A0K0K1A5 114 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 TRBV30A0A0K0K1B3 111 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 SDHAF1A6NFY7 115 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 C9JAW5 83 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 H3BT86 120 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 J3QQQ9 107 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 VCYO14598 125 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 LEPROTO15243 131 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 PSCAO43653 123 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 LGALS3P17931 250 aaKnown RBP3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 POLR2KP53803 58 aaKnown RBP3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 C1orf134Q5TEV5 83 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 RPL39LQ96EH5 51 aaKnown RBP3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 TMEM126AQ9H061 195 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 Q9H8V8 135 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 KIF25-AS1Q9Y6Z4 181 aa3.92□□□□□ -1.78
CTNNA1-220ENST00000520260 IGHV3-38A0A0C4DH36 116 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 TRBV7-7A0A0K0K1E9 115 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 NBDYA0A0U1RRE5 68 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 A4D1N5 150 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 H7C423 109 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 EIF4EBP3O60516 100 aaPredicted RBP3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 TSPEAR-AS2P59090 65 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 LINC00315P59091 139 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 LYPD5Q6UWN5 251 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 Q6ZQT7 251 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 ZNRF2Q8NHG8 242 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 NTN5Q8WTR8 489 aaPredicted RBP3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 TMEM101Q96IK0 257 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 VSIG2Q96IQ7 327 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 CHCHD5Q9BSY4 110 aa3.91□□□□□ -1.78
CTNNA1-220ENST00000520260 DNAH9Q9NYC9 4486 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 TRBV27A0A0K0K1C4 114 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 TMEM223A0PJW6 202 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 LINC01556Q5JQF7 62 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 TMEM170BQ5T4T1 132 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 SFTA2Q6UW10 78 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 C6orf223Q8N319 242 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 UBE2WQ96B02 151 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 TMEM243Q9BU79 118 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 IMUPQ9GZP8 106 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 PKIGQ9Y2B9 76 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 LINC00588Q9Y4M8 146 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 MUC4Q99102 2169 aa3.9□□□□□ -1.79
CTNNA1-220ENST00000520260 TRBV6-8A0A0A6YYG3 113 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 I3L3M4 83 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 ACYP1P07311 99 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 DNAH10OSP0CZ25 163 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 HERV-K104P63124 156 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 ESRGQ1W209 222 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 C14orf177Q52M58 125 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 SUMO4Q6EEV6 95 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 DGAT2L7PQ6IED9 249 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 MUSTN1Q8IVN3 82 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 SPANXCQ9NY87 97 aa3.89□□□□□ -1.79
CTNNA1-220ENST00000520260 HUWE1Q7Z6Z7 4374 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-220ENST00000520260 M0QY20 66 aa3.88□□□□□ -1.79
CTNNA1-220ENST00000520260 ZNF22P17026 224 aaPredicted RBP3.88□□□□□ -1.79
CTNNA1-220ENST00000520260 C2orf82Q6UX34 121 aa3.88□□□□□ -1.79
CTNNA1-220ENST00000520260 SMIM20Q8N5G0 67 aa3.88□□□□□ -1.79
CTNNA1-220ENST00000520260 A0A0J9YXY3 114 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 TEX49A0A1B0GTD5 131 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 LST1O00453 97 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 TRIAP1O43715 76 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 TIMM17BO60830 172 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 ANGP03950 147 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 COX6CP09669 75 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 LINC00694P0DN24 101 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 MIAQ16674 131 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 Q1RN00 199 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 MEIG1Q5JSS6 88 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 LITAFQ99732 161 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 C1orf43Q9BWL3 253 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 JPT2Q9H910 190 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 PYGO1Q9Y3Y4 419 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
CTNNA1-220ENST00000520260 LOC100131303A0A0U1RQF7 123 aa3.86□□□□□ -1.79
CTNNA1-220ENST00000520260 M0R2N4 97 aa3.86□□□□□ -1.79
CTNNA1-220ENST00000520260 RPL39P62891 51 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-220ENST00000520260 SDIM1Q6ZPB5 146 aa3.86□□□□□ -1.79
CTNNA1-220ENST00000520260 C20orf203Q8NBC4 194 aa3.86□□□□□ -1.79
CTNNA1-220ENST00000520260 IGLV4-3A0A075B6K6 122 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 IGHV1-58A0A0C4DH39 117 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 A0A1B0GUV1 79 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 A0A1B0GX51 115 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 IBA57-AS1B1ANH7 110 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 IGHV3-30-3P0DP02 117 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 CXCL5P42830 114 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 MRPS36P82909 103 aaKnown RBP3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 Q6ZR54 194 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 LINC00643Q86TS7 51 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms