RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 H3BNG1 76 aa5.79□□□□□ -1.48
HMGB4-203ENST00000519684 SMCPP49901 116 aaPredicted RBP5.79□□□□□ -1.48
HMGB4-203ENST00000519684 CKS1BP61024 79 aa5.79□□□□□ -1.48
HMGB4-203ENST00000519684 IGLV10-54A0A075B6I4 117 aa5.78□□□□□ -1.48
HMGB4-203ENST00000519684 PFN2P35080 140 aa5.78□□□□□ -1.48
HMGB4-203ENST00000519684 Q8N3U1 123 aa5.78□□□□□ -1.48
HMGB4-203ENST00000519684 NBEAL2Q6ZNJ1 2754 aa5.77□□□□□ -1.48
HMGB4-203ENST00000519684 TRAV13-2A0A0B4J235 113 aa5.77□□□□□ -1.49
HMGB4-203ENST00000519684 SLC25A20O43772 301 aa5.77□□□□□ -1.49
HMGB4-203ENST00000519684 CRPP02741 224 aa5.77□□□□□ -1.49
HMGB4-203ENST00000519684 CXCL5P42830 114 aa5.77□□□□□ -1.49
HMGB4-203ENST00000519684 LINC01620Q4KN68 170 aa5.77□□□□□ -1.49
HMGB4-203ENST00000519684 LYPD5Q6UWN5 251 aa5.77□□□□□ -1.49
HMGB4-203ENST00000519684 SND1-IT1Q9HBX3 110 aa5.77□□□□□ -1.49
HMGB4-203ENST00000519684 M0QXV9 152 aa5.77□□□□□ -1.49
HMGB4-203ENST00000519684 KPRPQ5T749 579 aaPredicted RBP5.77□□□□□ -1.49
HMGB4-203ENST00000519684 Q6ZTC4 211 aa5.77□□□□□ -1.49
HMGB4-203ENST00000519684 TEN1Q86WV5 123 aa5.76□□□□□ -1.49
HMGB4-203ENST00000519684 A0A0J9YWU9 116 aa5.76□□□□□ -1.49
HMGB4-203ENST00000519684 PPDPFLQ8WWR9 84 aa5.76□□□□□ -1.49
HMGB4-203ENST00000519684 KLK12Q9UKR0 248 aa5.76□□□□□ -1.49
HMGB4-203ENST00000519684 GAGE12HA6NDE8 117 aa5.75□□□□□ -1.49
HMGB4-203ENST00000519684 FOXI1Q12951 378 aa5.75□□□□□ -1.49
HMGB4-203ENST00000519684 ANKRD29Q8N6D5 301 aa5.75□□□□□ -1.49
HMGB4-203ENST00000519684 C11orf45Q8TAV5 145 aa5.75□□□□□ -1.49
HMGB4-203ENST00000519684 CLEC2BQ92478 149 aa5.75□□□□□ -1.49
HMGB4-203ENST00000519684 TRBV10-2A0A0K0K1G8 114 aa5.75□□□□□ -1.49
HMGB4-203ENST00000519684 LST1O00453 97 aa5.75□□□□□ -1.49
HMGB4-203ENST00000519684 CCL18P55774 89 aa5.75□□□□□ -1.49
HMGB4-203ENST00000519684 C2orf82Q6UX34 121 aa5.75□□□□□ -1.49
HMGB4-203ENST00000519684 NANOS2P60321 138 aaKnown RBP5.74□□□□□ -1.49
HMGB4-203ENST00000519684 PRR34Q9NV39 138 aa5.74□□□□□ -1.49
HMGB4-203ENST00000519684 DEFB131BA0A096LNP1 70 aa5.74□□□□□ -1.49
HMGB4-203ENST00000519684 COX17Q14061 63 aa5.74□□□□□ -1.49
HMGB4-203ENST00000519684 KIAA0087Q14695 138 aa5.74□□□□□ -1.49
HMGB4-203ENST00000519684 TRAV8-4A0A0B4J246 113 aa5.73□□□□□ -1.49
HMGB4-203ENST00000519684 CYSRT1A8MQ03 144 aa5.73□□□□□ -1.49
HMGB4-203ENST00000519684 SPAG11BQ08648 103 aa5.73□□□□□ -1.49
HMGB4-203ENST00000519684 UBE2WQ96B02 151 aa5.73□□□□□ -1.49
HMGB4-203ENST00000519684 SPATA25Q9BR10 227 aa5.73□□□□□ -1.49
HMGB4-203ENST00000519684 KLK5Q9Y337 293 aaPredicted RBP5.73□□□□□ -1.49
HMGB4-203ENST00000519684 H3BT86 120 aa5.73□□□□□ -1.49
HMGB4-203ENST00000519684 ENHOQ6UWT2 76 aa5.73□□□□□ -1.49
HMGB4-203ENST00000519684 WFDC10BQ8IUB3 73 aa5.73□□□□□ -1.49
HMGB4-203ENST00000519684 IGKV2-28A0A075B6P5 120 aa5.72□□□□□ -1.49
HMGB4-203ENST00000519684 IGKV2D-28P01615 120 aa5.72□□□□□ -1.49
HMGB4-203ENST00000519684 LINC00337Q8N6G1 96 aa5.72□□□□□ -1.49
HMGB4-203ENST00000519684 FBN1P35555 2871 aaKnown RBP5.72□□□□□ -1.49
HMGB4-203ENST00000519684 TRRAPQ9Y4A5 3859 aa5.72□□□□□ -1.49
HMGB4-203ENST00000519684 RPL28P46779 137 aaKnown RBP5.71□□□□□ -1.49
HMGB4-203ENST00000519684 OR13C6PQ8NH95 151 aa5.71□□□□□ -1.49
HMGB4-203ENST00000519684 CARD19Q96LW7 228 aa5.71□□□□□ -1.49
HMGB4-203ENST00000519684 LINC01600Q96MT4 127 aa5.71□□□□□ -1.49
HMGB4-203ENST00000519684 NTN5Q8WTR8 489 aaPredicted RBP5.71□□□□□ -1.5
HMGB4-203ENST00000519684 FLNBO75369 2602 aaKnown RBP5.71□□□□□ -1.5
HMGB4-203ENST00000519684 PRB2P02812 416 aaPredicted RBP5.7□□□□□ -1.5
HMGB4-203ENST00000519684 ESRGQ1W209 222 aa5.7□□□□□ -1.5
HMGB4-203ENST00000519684 DEFB121Q5J5C9 76 aa5.7□□□□□ -1.5
HMGB4-203ENST00000519684 TRAV10A0A0B4J240 114 aa5.7□□□□□ -1.5
HMGB4-203ENST00000519684 TRACP01848 142 aa5.7□□□□□ -1.5
HMGB4-203ENST00000519684 SEC61GP60059 68 aa5.7□□□□□ -1.5
HMGB4-203ENST00000519684 MUC7Q8TAX7 377 aa5.7□□□□□ -1.5
HMGB4-203ENST00000519684 SMIM11BQ8TCY0 68 aa5.69□□□□□ -1.5
HMGB4-203ENST00000519684 A0A1B0GV72 72 aa5.69□□□□□ -1.5
HMGB4-203ENST00000519684 K7EIL1 84 aa5.69□□□□□ -1.5
HMGB4-203ENST00000519684 NDUFC2O95298 119 aa5.69□□□□□ -1.5
HMGB4-203ENST00000519684 C9orf116Q5BN46 136 aaPredicted RBP5.69□□□□□ -1.5
HMGB4-203ENST00000519684 UNQ6190/PRO20217Q6UXQ8 127 aa5.69□□□□□ -1.5
HMGB4-203ENST00000519684 C6orf223Q8N319 242 aa5.69□□□□□ -1.5
HMGB4-203ENST00000519684 C15orf53Q8NAA6 179 aa5.69□□□□□ -1.5
HMGB4-203ENST00000519684 MRAPQ8TCY5 172 aa5.69□□□□□ -1.5
HMGB4-203ENST00000519684 TM2D3Q9BRN9 247 aa5.69□□□□□ -1.5
HMGB4-203ENST00000519684 H0YGX0 51 aa5.68□□□□□ -1.5
HMGB4-203ENST00000519684 SIGMAR1Q99720 223 aa5.68□□□□□ -1.5
HMGB4-203ENST00000519684 LINC01556Q5JQF7 62 aa5.68□□□□□ -1.5
HMGB4-203ENST00000519684 TEX49A0A1B0GTD5 131 aa5.67□□□□□ -1.5
HMGB4-203ENST00000519684 ZNF561-AS1K7EIQ3 104 aa5.67□□□□□ -1.5
HMGB4-203ENST00000519684 C5orf47Q569G3 176 aa5.67□□□□□ -1.5
HMGB4-203ENST00000519684 C10orf25Q5T742 122 aa5.67□□□□□ -1.5
HMGB4-203ENST00000519684 LINC00526Q96FQ7 95 aa5.67□□□□□ -1.5
HMGB4-203ENST00000519684 DNAL4O96015 105 aa5.66□□□□□ -1.5
HMGB4-203ENST00000519684 GVQW2A0A096LPI5 108 aaPredicted RBP5.66□□□□□ -1.5
HMGB4-203ENST00000519684 FAM218AQ96MZ4 157 aa5.66□□□□□ -1.5
HMGB4-203ENST00000519684 STAB1Q9NY15 2570 aa5.66□□□□□ -1.5
HMGB4-203ENST00000519684 BAHCC1Q9P281 2608 aa5.66□□□□□ -1.5
HMGB4-203ENST00000519684 BAALC-AS2P0C853 105 aa5.65□□□□□ -1.5
HMGB4-203ENST00000519684 CAMK2N2Q96S95 79 aa5.65□□□□□ -1.5
HMGB4-203ENST00000519684 TMEM126AQ9H061 195 aa5.65□□□□□ -1.5
HMGB4-203ENST00000519684 CMYA5Q8N3K9 4069 aa5.65□□□□□ -1.5
HMGB4-203ENST00000519684 IGKV2D-24A0A075B6R9 120 aa5.65□□□□□ -1.51
HMGB4-203ENST00000519684 NCR3O14931 201 aa5.65□□□□□ -1.51
HMGB4-203ENST00000519684 HIGD2BQ4VC39 106 aa5.65□□□□□ -1.51
HMGB4-203ENST00000519684 S100A7L2Q5SY68 101 aa5.65□□□□□ -1.51
HMGB4-203ENST00000519684 DNAH10OSP0CZ25 163 aa5.64□□□□□ -1.51
HMGB4-203ENST00000519684 PRR3P79522 188 aaKnown RBP5.64□□□□□ -1.51
HMGB4-203ENST00000519684 CDIP1Q9H305 208 aa5.64□□□□□ -1.51
HMGB4-203ENST00000519684 C6orf48Q9UBA6 75 aa5.64□□□□□ -1.51
HMGB4-203ENST00000519684 A0A087WYN8 130 aa5.64□□□□□ -1.51
HMGB4-203ENST00000519684 KRTAP26-1Q6PEX3 210 aa5.64□□□□□ -1.51
HMGB4-203ENST00000519684 Q9HAA7 133 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms