RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 PIGBOS1A0A0B4J2F0 54 aa-1.69□□□□□ -2.68
PCM1-208ENST00000518877 LOC285095A0A1B0GVY8 99 aa-1.69□□□□□ -2.68
PCM1-208ENST00000518877 TMEM191AQ9H0A3 160 aa-1.69□□□□□ -2.68
PCM1-208ENST00000518877 ANKRD50Q9ULJ7 1429 aa-1.69□□□□□ -2.68
PCM1-208ENST00000518877 CICQ96RK0 1608 aaPredicted RBP-1.69□□□□□ -2.68
PCM1-208ENST00000518877 BTG2P78543 158 aa-1.7□□□□□ -2.68
PCM1-208ENST00000518877 SMCO1Q147U7 214 aa-1.7□□□□□ -2.68
PCM1-208ENST00000518877 AKAP14Q86UN6 197 aa-1.7□□□□□ -2.68
PCM1-208ENST00000518877 FAIMQ9NVQ4 179 aa-1.7□□□□□ -2.68
PCM1-208ENST00000518877 PKD1L2Q7Z442 2459 aa-1.71□□□□□ -2.68
PCM1-208ENST00000518877 IGLC1P0CG04 106 aa-1.71□□□□□ -2.68
PCM1-208ENST00000518877 WFDC13Q8IUB5 93 aa-1.71□□□□□ -2.68
PCM1-208ENST00000518877 LCN9Q8WX39 176 aa-1.71□□□□□ -2.68
PCM1-208ENST00000518877 FAM167A-AS1Q96KT0 104 aa-1.71□□□□□ -2.68
PCM1-208ENST00000518877 PDCD10Q9BUL8 212 aa-1.71□□□□□ -2.68
PCM1-208ENST00000518877 DSPP15924 2871 aaKnown RBP-1.71□□□□□ -2.68
PCM1-208ENST00000518877 MARF1Q9Y4F3 1742 aaKnown RBP-1.71□□□□□ -2.68
PCM1-208ENST00000518877 TRAV30A0A087WSZ9 112 aa-1.72□□□□□ -2.68
PCM1-208ENST00000518877 MRPL54Q6P161 138 aaKnown RBP-1.72□□□□□ -2.68
PCM1-208ENST00000518877 HEPN1Q6WQI6 88 aa-1.72□□□□□ -2.68
PCM1-208ENST00000518877 PRO1933Q9H354 126 aa-1.72□□□□□ -2.68
PCM1-208ENST00000518877 CDC42SE2Q9NRR3 84 aa-1.72□□□□□ -2.68
PCM1-208ENST00000518877 LINC00474Q9P2X8 69 aa-1.72□□□□□ -2.68
PCM1-208ENST00000518877 QRICH2Q9H0J4 1663 aa-1.72□□□□□ -2.68
PCM1-208ENST00000518877 ARHGEF5Q12774 1597 aa-1.72□□□□□ -2.69
PCM1-208ENST00000518877 SEC11AP67812 179 aa-1.73□□□□□ -2.69
PCM1-208ENST00000518877 WHAMMP3Q1A5X7 153 aa-1.73□□□□□ -2.69
PCM1-208ENST00000518877 LELP1Q5T871 98 aa-1.73□□□□□ -2.69
PCM1-208ENST00000518877 ANP32BQ92688 251 aaKnown RBP-1.73□□□□□ -2.69
PCM1-208ENST00000518877 NXT2Q9NPJ8 142 aaKnown RBP-1.73□□□□□ -2.69
PCM1-208ENST00000518877 CDKN2A-AS1Q9UH64 79 aa-1.73□□□□□ -2.69
PCM1-208ENST00000518877 MTORP42345 2549 aa-1.73□□□□□ -2.69
PCM1-208ENST00000518877 GCN1Q92616 2671 aaKnown RBP-1.73□□□□□ -2.69
PCM1-208ENST00000518877 MYOM1P52179 1685 aa-1.74□□□□□ -2.69
PCM1-208ENST00000518877 RIF1Q5UIP0 2472 aaKnown RBP-1.74□□□□□ -2.69
PCM1-208ENST00000518877 XRN1Q8IZH2 1706 aaKnown RBP-1.74□□□□□ -2.69
PCM1-208ENST00000518877 C1orf167Q5SNV9 1468 aa-1.74□□□□□ -2.69
PCM1-208ENST00000518877 H0YAA0 97 aa-1.74□□□□□ -2.69
PCM1-208ENST00000518877 K7EP34 96 aa-1.74□□□□□ -2.69
PCM1-208ENST00000518877 CCL22O00626 93 aa-1.74□□□□□ -2.69
PCM1-208ENST00000518877 MRPL34Q9BQ48 92 aaKnown RBP-1.74□□□□□ -2.69
PCM1-208ENST00000518877 COPZ2Q9P299 210 aa-1.74□□□□□ -2.69
PCM1-208ENST00000518877 SERP1Q9Y6X1 66 aa-1.74□□□□□ -2.69
PCM1-208ENST00000518877 COL12A1Q99715 3063 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 CFTRP13569 1480 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 CCDC168Q8NDH2 2452 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 LOC100130705A0A1B0GUX0 176 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 SMIM21Q3B7S5 101 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 C12orf73Q69YU5 71 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 LZICQ8WZA0 190 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 TCEAL4Q96EI5 215 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 CCDC167Q9P0B6 97 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 TET3O43151 1660 aa-1.75□□□□□ -2.69
PCM1-208ENST00000518877 NBEAL2Q6ZNJ1 2754 aa-1.76□□□□□ -2.69
PCM1-208ENST00000518877 CELSR3Q9NYQ7 3312 aa-1.76□□□□□ -2.69
PCM1-208ENST00000518877 UTP20O75691 2785 aaKnown RBP-1.76□□□□□ -2.69
PCM1-208ENST00000518877 CHKB-CPT1BH3BT56 60 aa-1.76□□□□□ -2.69
PCM1-208ENST00000518877 DEFB1P60022 68 aa-1.76□□□□□ -2.69
PCM1-208ENST00000518877 FAM223AQ8IWN6 122 aa-1.76□□□□□ -2.69
PCM1-208ENST00000518877 MYOZ3Q8TDC0 251 aa-1.76□□□□□ -2.69
PCM1-208ENST00000518877 PYDC1Q8WXC3 89 aa-1.76□□□□□ -2.69
PCM1-208ENST00000518877 SPANXDQ9BXN6 97 aa-1.76□□□□□ -2.69
PCM1-208ENST00000518877 HIGD1BQ9P298 99 aa-1.76□□□□□ -2.69
PCM1-208ENST00000518877 MYH7P12883 1935 aa-1.77□□□□□ -2.69
PCM1-208ENST00000518877 RERGLQ9H628 205 aa-1.77□□□□□ -2.69
PCM1-208ENST00000518877 ARL2-SNX15V9GYD0 113 aa-1.77□□□□□ -2.69
PCM1-208ENST00000518877 PDE4DIPQ5VU43 2346 aa-1.77□□□□□ -2.69
PCM1-208ENST00000518877 NCOA3Q9Y6Q9 1424 aa-1.77□□□□□ -2.69
PCM1-208ENST00000518877 GRIN2AQ12879 1464 aa-1.77□□□□□ -2.69
PCM1-208ENST00000518877 LRRK2Q5S007 2527 aa-1.77□□□□□ -2.69
PCM1-208ENST00000518877 CEP152O94986 1710 aa-1.77□□□□□ -2.69
PCM1-208ENST00000518877 FAM186AA6NE01 2351 aa-1.78□□□□□ -2.69
PCM1-208ENST00000518877 A0A1B0GU69 56 aa-1.78□□□□□ -2.69
PCM1-208ENST00000518877 CPSF1Q10570 1443 aaKnown RBP-1.78□□□□□ -2.69
PCM1-208ENST00000518877 PLEKHH2Q8IVE3 1493 aa-1.78□□□□□ -2.69
PCM1-208ENST00000518877 TCHHQ07283 1943 aa-1.78□□□□□ -2.69
PCM1-208ENST00000518877 PDCD11Q14690 1871 aaKnown RBP-1.8□□□□□ -2.7
PCM1-208ENST00000518877 FRYQ5TBA9 3013 aa-1.8□□□□□ -2.7
PCM1-208ENST00000518877 NLRP1Q9C000 1473 aa-1.8□□□□□ -2.7
PCM1-208ENST00000518877 A0A1B0GWA3 101 aa-1.8□□□□□ -2.7
PCM1-208ENST00000518877 ARPC4P59998 168 aa-1.8□□□□□ -2.7
PCM1-208ENST00000518877 MT1XP80297 61 aa-1.8□□□□□ -2.7
PCM1-208ENST00000518877 DR1Q01658 176 aa-1.8□□□□□ -2.7
PCM1-208ENST00000518877 UQCR10Q9UDW1 63 aa-1.8□□□□□ -2.7
PCM1-208ENST00000518877 S4R3F8 94 aa-1.8□□□□□ -2.7
PCM1-208ENST00000518877 KIAA1551Q9HCM1 1747 aa-1.8□□□□□ -2.7
PCM1-208ENST00000518877 CLIP1P30622 1438 aa-1.81□□□□□ -2.7
PCM1-208ENST00000518877 SNCAP37840 140 aa-1.81□□□□□ -2.7
PCM1-208ENST00000518877 MEIG1Q5JSS6 88 aa-1.81□□□□□ -2.7
PCM1-208ENST00000518877 C9orf153Q5TBE3 101 aa-1.81□□□□□ -2.7
PCM1-208ENST00000518877 SNRNP25Q9BV90 132 aaKnown RBP-1.81□□□□□ -2.7
PCM1-208ENST00000518877 NUP188Q5SRE5 1749 aa-1.81□□□□□ -2.7
PCM1-208ENST00000518877 SHROOM2Q13796 1616 aa-1.81□□□□□ -2.7
PCM1-208ENST00000518877 ANKRD36A6QL64 1941 aa-1.81□□□□□ -2.7
PCM1-208ENST00000518877 SMG6Q86US8 1419 aaKnown RBP-1.82□□□□□ -2.7
PCM1-208ENST00000518877 LRRC37AA6NMS7 1700 aa-1.82□□□□□ -2.7
PCM1-208ENST00000518877 KNDC1Q76NI1 1749 aa-1.82□□□□□ -2.7
PCM1-208ENST00000518877 ACACBO00763 2458 aa-1.82□□□□□ -2.7
PCM1-208ENST00000518877 ROBO1Q9Y6N7 1651 aa-1.82□□□□□ -2.7
PCM1-208ENST00000518877 MIF4GDA9UHW6 222 aaKnown RBP-1.82□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms