RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TEN1Q86WV5 123 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 NEXN-AS1Q8NBZ9 246 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 PLEKHB2Q96CS7 222 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 TPPP3Q9BW30 176 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 NOP10Q9NPE3 64 aaKnown RBP2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 NXT2Q9NPJ8 142 aaKnown RBP2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 CYSLTR1Q9Y271 337 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 IGLV4-69A0A075B6H9 119 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TRGV2A0A075B6R0 118 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TRGV1A0A0A0MS02 117 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TRAV26-2A0A0B4J265 109 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TRAV4A0A0B4J268 109 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 A0A0J9YY99 117 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 MYMXA0A1B0GTQ4 84 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TRBV6-4A0A1B0GX49 114 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 A8MWV9 139 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 J3KRW8 73 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 RHODO00212 210 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 GNRH2O43555 120 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 NXPH4O95158 308 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TCL1BO95988 128 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TSHBP01222 138 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 ORM1P02763 201 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 DEFB130BP0DP73 79 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 DEFB130AP0DP74 79 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 RNASE3P12724 160 aaKnown RBP2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 S100A4P26447 101 aaKnown RBP2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 PLNP26678 52 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 EMP1P54849 157 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TIRAPP58753 221 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 ZNF876PQ49A33 203 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 CFAP161Q6P656 301 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 Q6ZQT7 251 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 Q6ZTI0 123 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 ANKRD29Q8N6D5 301 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 BAALCQ8WXS3 180 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TOMM6Q96B49 74 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 C9orf85Q96MD7 179 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 KIR2DL4Q99706 377 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 PRADC1Q9BSG0 188 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 SMIM2Q9BVW6 85 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 SS18L2Q9UHA2 77 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 PRO0255Q9UI72 69 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
SCARNA13-201ENST00000516672 TRBV10-1A0A0K0K1A3 114 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 LINC01549A6NIU2 74 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 C11orf86A6NJI1 115 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 F5H768 121 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 CCDC179H3BU77 68 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 H7C1H1 209 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE7O76087 117 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 IGHV3-30P01768 117 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 PRM2P04554 102 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 CRYGDP07320 174 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 PRSS1P07477 247 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE12FP0CL80 117 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE12GP0CL81 117 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE12IP0CL82 117 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 IGHV3-30-5P0DP03 117 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 NDUFV3P56181 108 aaKnown RBP2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 RPL32P62910 135 aaKnown RBP2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 FHL2Q14192 279 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 LAGE3Q14657 143 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 MRPL23Q16540 153 aaKnown RBP2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 Q6Q795 121 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 HIST1H4GQ99525 98 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 UPK3BQ9BT76 320 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 VCX2Q9H322 139 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 PHLDA3Q9Y5J5 127 aa2.01□□□□□ -2.09
SCARNA13-201ENST00000516672 TRGV4A0A0C4DH28 118 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 IGIPA6NJ69 53 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 ZNF815PA8K554 130 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 M0R381 172 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 PAX4O43316 350 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 IGHV3-53P01767 116 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 IGHV3-33P01772 117 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 HTN3P15516 51 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 RPL13AP40429 203 aaKnown RBP2□□□□□ -2.09
SCARNA13-201ENST00000516672 PSMB2P49721 201 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE5Q13069 117 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE6Q13070 117 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 RHOHQ15669 191 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 LCE1DQ5T752 114 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 SPANXN1Q5VSR9 72 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 C10orf126Q8N4M7 172 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 SLC25A29Q8N8R3 303 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 RPL39LQ96EH5 51 aaKnown RBP2□□□□□ -2.09
SCARNA13-201ENST00000516672 VSIG2Q96IQ7 327 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 ICOSQ9Y6W8 199 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 KIF25-AS1Q9Y6Z4 181 aa2□□□□□ -2.09
SCARNA13-201ENST00000516672 TRBV20-1A0A075B6N2 111 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 A0A096LPF7 62 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 A0A0B4J2C4 111 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 LRCOL1A6NCL2 159 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 B5MCH6 92 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 H3BVH4 76 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 K7EQD1 137 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 PPP1R17O96001 155 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 CHTF8P0CG12 524 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms