RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 SPTBN2O15020 2390 aa0.56□□□□□ -2.32
RNU6-488P-201ENST00000515918 PAPPA2Q9BXP8 1791 aa0.56□□□□□ -2.32
RNU6-488P-201ENST00000515918 ABCC3O15438 1527 aa0.56□□□□□ -2.32
RNU6-488P-201ENST00000515918 IQSEC2Q5JU85 1478 aa0.55□□□□□ -2.32
RNU6-488P-201ENST00000515918 C2CD3Q4AC94 2353 aa0.55□□□□□ -2.32
RNU6-488P-201ENST00000515918 FXYD6-FXYD2A0A087WZ82 144 aa0.55□□□□□ -2.32
RNU6-488P-201ENST00000515918 A0A1B0GU69 56 aa0.55□□□□□ -2.32
RNU6-488P-201ENST00000515918 HMGN3Q15651 99 aa0.55□□□□□ -2.32
RNU6-488P-201ENST00000515918 PYY3Q5JQD4 70 aa0.55□□□□□ -2.32
RNU6-488P-201ENST00000515918 SHPRHQ149N8 1683 aa0.55□□□□□ -2.32
RNU6-488P-201ENST00000515918 RB1CC1Q8TDY2 1594 aa0.54□□□□□ -2.32
RNU6-488P-201ENST00000515918 MYO3AQ8NEV4 1616 aa0.54□□□□□ -2.32
RNU6-488P-201ENST00000515918 PVALEFA0A1B0GWK0 134 aa0.54□□□□□ -2.32
RNU6-488P-201ENST00000515918 A0A0G2JMZ2 1700 aa0.54□□□□□ -2.32
RNU6-488P-201ENST00000515918 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
RNU6-488P-201ENST00000515918 SLIT1O75093 1534 aa0.54□□□□□ -2.32
RNU6-488P-201ENST00000515918 ANKRD17O75179 2603 aaKnown RBP0.53□□□□□ -2.32
RNU6-488P-201ENST00000515918 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
RNU6-488P-201ENST00000515918 LEPROTL1O95214 131 aa0.53□□□□□ -2.32
RNU6-488P-201ENST00000515918 GNGT1P63211 74 aa0.53□□□□□ -2.32
RNU6-488P-201ENST00000515918 WFDC2Q14508 124 aa0.53□□□□□ -2.32
RNU6-488P-201ENST00000515918 DNAJC13O75165 2243 aa0.53□□□□□ -2.33
RNU6-488P-201ENST00000515918 GOLGA4Q13439 2230 aaKnown RBP0.52□□□□□ -2.33
RNU6-488P-201ENST00000515918 D6R8Y8 96 aa0.52□□□□□ -2.33
RNU6-488P-201ENST00000515918 MUSTN1Q8IVN3 82 aa0.52□□□□□ -2.33
RNU6-488P-201ENST00000515918 CELSR2Q9HCU4 2923 aa0.52□□□□□ -2.33
RNU6-488P-201ENST00000515918 CUX1P39880 1505 aa0.52□□□□□ -2.33
RNU6-488P-201ENST00000515918 UBR1Q8IWV7 1749 aa0.52□□□□□ -2.33
RNU6-488P-201ENST00000515918 K7EQZ3 153 aa0.51□□□□□ -2.33
RNU6-488P-201ENST00000515918 HMGN2P05204 90 aaKnown RBP0.51□□□□□ -2.33
RNU6-488P-201ENST00000515918 S100A16Q96FQ6 103 aaKnown RBP0.51□□□□□ -2.33
RNU6-488P-201ENST00000515918 SETBP1Q9Y6X0 1596 aa0.51□□□□□ -2.33
RNU6-488P-201ENST00000515918 SAMD9Q5K651 1589 aa0.5□□□□□ -2.33
RNU6-488P-201ENST00000515918 NEXMIFQ5QGS0 1516 aa0.5□□□□□ -2.33
RNU6-488P-201ENST00000515918 PLIN4Q96Q06 1357 aa0.5□□□□□ -2.33
RNU6-488P-201ENST00000515918 CYB5AP00167 134 aa0.5□□□□□ -2.33
RNU6-488P-201ENST00000515918 SPINK1P00995 79 aa0.5□□□□□ -2.33
RNU6-488P-201ENST00000515918 PEA15Q15121 130 aa0.5□□□□□ -2.33
RNU6-488P-201ENST00000515918 PLCE1Q9P212 2302 aa0.5□□□□□ -2.33
RNU6-488P-201ENST00000515918 C5P01031 1676 aa0.49□□□□□ -2.33
RNU6-488P-201ENST00000515918 KIAA0556O60303 1618 aa0.49□□□□□ -2.33
RNU6-488P-201ENST00000515918 MED14O60244 1454 aa0.49□□□□□ -2.33
RNU6-488P-201ENST00000515918 TDRG1Q3Y452 100 aa0.49□□□□□ -2.33
RNU6-488P-201ENST00000515918 Q5VSD8 79 aa0.49□□□□□ -2.33
RNU6-488P-201ENST00000515918 ALKAL2Q6UX46 152 aa0.49□□□□□ -2.33
RNU6-488P-201ENST00000515918 UBE2D4Q9Y2X8 147 aa0.49□□□□□ -2.33
RNU6-488P-201ENST00000515918 LRP1Q07954 4544 aaKnown RBP0.48□□□□□ -2.33
RNU6-488P-201ENST00000515918 RGPD4Q7Z3J3 1758 aa0.48□□□□□ -2.33
RNU6-488P-201ENST00000515918 CFDP00746 253 aaPredicted RBP0.48□□□□□ -2.33
RNU6-488P-201ENST00000515918 COX6B1P14854 86 aa0.48□□□□□ -2.33
RNU6-488P-201ENST00000515918 ZFYVE26Q68DK2 2539 aa0.48□□□□□ -2.33
RNU6-488P-201ENST00000515918 CSMD3Q7Z407 3707 aa0.48□□□□□ -2.33
RNU6-488P-201ENST00000515918 USF3Q68DE3 2245 aa0.48□□□□□ -2.33
RNU6-488P-201ENST00000515918 PPRC1Q5VV67 1664 aaKnown RBP0.47□□□□□ -2.33
RNU6-488P-201ENST00000515918 IGLC2P0DOY2 106 aa0.47□□□□□ -2.33
RNU6-488P-201ENST00000515918 IGLC3P0DOY3 106 aa0.47□□□□□ -2.33
RNU6-488P-201ENST00000515918 SMIM11AP58511 58 aa0.47□□□□□ -2.33
RNU6-488P-201ENST00000515918 NMSQ5H8A3 153 aa0.47□□□□□ -2.33
RNU6-488P-201ENST00000515918 USP24Q9UPU5 2620 aa0.47□□□□□ -2.33
RNU6-488P-201ENST00000515918 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
RNU6-488P-201ENST00000515918 SPRR1AP35321 89 aa0.46□□□□□ -2.34
RNU6-488P-201ENST00000515918 CHD9Q3L8U1 2897 aa0.46□□□□□ -2.34
RNU6-488P-201ENST00000515918 ZNF292O60281 2723 aa0.45□□□□□ -2.34
RNU6-488P-201ENST00000515918 CRYBG1Q9Y4K1 1723 aa0.45□□□□□ -2.34
RNU6-488P-201ENST00000515918 IQCF6A8MYZ5 107 aa0.45□□□□□ -2.34
RNU6-488P-201ENST00000515918 SPRR1BP22528 89 aa0.45□□□□□ -2.34
RNU6-488P-201ENST00000515918 RGPD3A6NKT7 1758 aaPredicted RBP0.45□□□□□ -2.34
RNU6-488P-201ENST00000515918 FAT4Q6V0I7 4981 aa0.44□□□□□ -2.34
RNU6-488P-201ENST00000515918 DEFB109BQ30KR1 87 aa0.44□□□□□ -2.34
RNU6-488P-201ENST00000515918 CRIPTQ9P021 101 aa0.44□□□□□ -2.34
RNU6-488P-201ENST00000515918 KIF14Q15058 1648 aa0.43□□□□□ -2.34
RNU6-488P-201ENST00000515918 UACAQ9BZF9 1416 aa0.43□□□□□ -2.34
RNU6-488P-201ENST00000515918 MYH4Q9Y623 1939 aa0.42□□□□□ -2.34
RNU6-488P-201ENST00000515918 ALKQ9UM73 1620 aa0.42□□□□□ -2.34
RNU6-488P-201ENST00000515918 PIEZO2Q9H5I5 2752 aa0.42□□□□□ -2.34
RNU6-488P-201ENST00000515918 NAV2Q8IVL1 2488 aa0.42□□□□□ -2.34
RNU6-488P-201ENST00000515918 SNRPFP62306 86 aaKnown RBP0.42□□□□□ -2.34
RNU6-488P-201ENST00000515918 USMG5Q96IX5 58 aa0.42□□□□□ -2.34
RNU6-488P-201ENST00000515918 RABAC1Q9UI14 185 aa0.42□□□□□ -2.34
RNU6-488P-201ENST00000515918 U3KQA8 63 aa0.42□□□□□ -2.34
RNU6-488P-201ENST00000515918 ATP7BP35670 1465 aa0.41□□□□□ -2.34
RNU6-488P-201ENST00000515918 AKAP6Q13023 2319 aa0.41□□□□□ -2.34
RNU6-488P-201ENST00000515918 MYMXA0A1B0GTQ4 84 aa0.41□□□□□ -2.34
RNU6-488P-201ENST00000515918 TMEM131LA2VDJ0 1609 aa0.41□□□□□ -2.34
RNU6-488P-201ENST00000515918 IGF2RP11717 2491 aa0.41□□□□□ -2.34
RNU6-488P-201ENST00000515918 LRRC37AA6NMS7 1700 aa0.41□□□□□ -2.34
RNU6-488P-201ENST00000515918 NKTRP30414 1462 aaKnown RBP0.41□□□□□ -2.34
RNU6-488P-201ENST00000515918 PPLO60437 1756 aa0.4□□□□□ -2.35
RNU6-488P-201ENST00000515918 PTPRZ1P23471 2315 aaPredicted RBP0.4□□□□□ -2.35
RNU6-488P-201ENST00000515918 PTPRQQ9UMZ3 2332 aa0.4□□□□□ -2.35
RNU6-488P-201ENST00000515918 PLGLAQ15195 96 aa0.4□□□□□ -2.35
RNU6-488P-201ENST00000515918 LINC00643Q86TS7 51 aa0.4□□□□□ -2.35
RNU6-488P-201ENST00000515918 CCDC141Q6ZP82 1450 aa0.4□□□□□ -2.35
RNU6-488P-201ENST00000515918 SPTBN1Q01082 2364 aaKnown RBP0.4□□□□□ -2.35
RNU6-488P-201ENST00000515918 MAP3K4Q9Y6R4 1608 aa0.39□□□□□ -2.35
RNU6-488P-201ENST00000515918 DEFB112Q30KQ8 113 aa0.39□□□□□ -2.35
RNU6-488P-201ENST00000515918 CCDC18Q5T9S5 1454 aa0.39□□□□□ -2.35
RNU6-488P-201ENST00000515918 MAGI2Q86UL8 1455 aa0.39□□□□□ -2.35
RNU6-488P-201ENST00000515918 FMN2Q9NZ56 1722 aa0.38□□□□□ -2.35
RNU6-488P-201ENST00000515918 URB1O60287 2271 aaKnown RBP0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms